RNA–Protein interactions for RNA: ENST00000506690.1

SQSTM1-211, Transcript of sequestosome 1, humanhuman

TSL 2

Gene SQSTM1, Length 2,405 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-211ENST00000506690 GOLGA8AA7E2F4 631 aa19.32■□□□□ 0.68
SQSTM1-211ENST00000506690 RNF225M0QZC1 329 aaPredicted RBP19.32■□□□□ 0.68
SQSTM1-211ENST00000506690 AGPSO00116 658 aa19.32■□□□□ 0.68
SQSTM1-211ENST00000506690 FMNL1O95466 1100 aaPredicted RBP19.32■□□□□ 0.68
SQSTM1-211ENST00000506690 GGCXP38435 758 aa19.32■□□□□ 0.68
SQSTM1-211ENST00000506690 SSRP1Q08945 709 aaKnown RBP19.32■□□□□ 0.68
SQSTM1-211ENST00000506690 DIS3L2Q8IYB7 885 aaKnown RBP19.32■□□□□ 0.68
SQSTM1-211ENST00000506690 KAT2BQ92831 832 aa19.32■□□□□ 0.68
SQSTM1-211ENST00000506690 SLC26A6Q9BXS9 759 aa19.32■□□□□ 0.68
SQSTM1-211ENST00000506690 PCDHB6Q9Y5E3 794 aa19.32■□□□□ 0.68
SQSTM1-211ENST00000506690 BCL9LQ86UU0 1499 aa19.32■□□□□ 0.68
SQSTM1-211ENST00000506690 TJP1Q07157 1748 aa19.32■□□□□ 0.68
SQSTM1-211ENST00000506690 PPP1R3GB7ZBB8 358 aa19.32■□□□□ 0.68
SQSTM1-211ENST00000506690 ERLIN2O94905 339 aa19.32■□□□□ 0.68
SQSTM1-211ENST00000506690 GSCP56915 257 aaPredicted RBP19.32■□□□□ 0.68
SQSTM1-211ENST00000506690 SCARF1Q14162 830 aa19.32■□□□□ 0.68
SQSTM1-211ENST00000506690 SH3RF1Q7Z6J0 888 aa19.32■□□□□ 0.68
SQSTM1-211ENST00000506690 SLF1Q9BQI6 1058 aa19.32■□□□□ 0.68
SQSTM1-211ENST00000506690 PUS3Q9BZE2 481 aaKnown RBP19.32■□□□□ 0.68
SQSTM1-211ENST00000506690 FOXP1Q9H334 677 aaPredicted RBP19.32■□□□□ 0.68
SQSTM1-211ENST00000506690 LY9Q9HBG7 655 aa19.32■□□□□ 0.68
SQSTM1-211ENST00000506690 LRRC10BA6NIK2 292 aa19.31■□□□□ 0.68
SQSTM1-211ENST00000506690 ADORA1P30542 326 aa19.31■□□□□ 0.68
SQSTM1-211ENST00000506690 SAFBQ15424 915 aaKnown RBP eCLIP19.31■□□□□ 0.68
SQSTM1-211ENST00000506690 E2F4Q16254 413 aa19.31■□□□□ 0.68
SQSTM1-211ENST00000506690 NBPF14Q5TI25 921 aa19.31■□□□□ 0.68
SQSTM1-211ENST00000506690 MMS19Q96T76 1030 aa19.31■□□□□ 0.68
SQSTM1-211ENST00000506690 CSRNP2Q9H175 543 aa19.31■□□□□ 0.68
SQSTM1-211ENST00000506690 REXO2Q9Y3B8 237 aaKnown RBP19.31■□□□□ 0.68
SQSTM1-211ENST00000506690 DCCP43146 1447 aa19.31■□□□□ 0.68
SQSTM1-211ENST00000506690 CCDC91Q7Z6B0 441 aa19.31■□□□□ 0.68
SQSTM1-211ENST00000506690 WASF1Q92558 559 aa19.31■□□□□ 0.68
SQSTM1-211ENST00000506690 XAGE2Q96GT9 111 aa19.31■□□□□ 0.68
SQSTM1-211ENST00000506690 ABCC12Q96J65 1359 aa19.31■□□□□ 0.68
SQSTM1-211ENST00000506690 RPGRIP1Q96KN7 1286 aa19.31■□□□□ 0.68
SQSTM1-211ENST00000506690 KAT14Q9H8E8 782 aa19.31■□□□□ 0.68
SQSTM1-211ENST00000506690 STRN4Q9NRL3 753 aa19.31■□□□□ 0.68
SQSTM1-211ENST00000506690 KIF1AQ12756 1690 aa19.3■□□□□ 0.68
SQSTM1-211ENST00000506690 ZAP70P43403 619 aa19.3■□□□□ 0.68
SQSTM1-211ENST00000506690 IRAK1P51617 712 aa19.3■□□□□ 0.68
SQSTM1-211ENST00000506690 FAM76AQ8TAV0 307 aa19.3■□□□□ 0.68
SQSTM1-211ENST00000506690 DDX17Q92841 729 aaKnown RBP19.3■□□□□ 0.68
SQSTM1-211ENST00000506690 MYL10Q9BUA6 226 aa19.3■□□□□ 0.68
SQSTM1-211ENST00000506690 CEP126Q9P2H0 1117 aa19.3■□□□□ 0.68
SQSTM1-211ENST00000506690 LIMA1Q9UHB6 759 aaKnown RBP19.3■□□□□ 0.68
SQSTM1-211ENST00000506690 B4E1Z4 1266 aa19.3■□□□□ 0.68
SQSTM1-211ENST00000506690 IFNAR1P17181 557 aa19.3■□□□□ 0.68
SQSTM1-211ENST00000506690 GUCY1A2P33402 732 aa19.3■□□□□ 0.68
SQSTM1-211ENST00000506690 MMP14P50281 582 aa19.3■□□□□ 0.68
SQSTM1-211ENST00000506690 TRIM14Q14142 442 aa19.3■□□□□ 0.68
SQSTM1-211ENST00000506690 PAPD7Q5XG87 772 aaKnown RBP19.3■□□□□ 0.68
SQSTM1-211ENST00000506690 GSDMAQ96QA5 445 aa19.3■□□□□ 0.68
SQSTM1-211ENST00000506690 RNF216Q9NWF9 866 aaPredicted RBP19.3■□□□□ 0.68
SQSTM1-211ENST00000506690 FAM169AQ9Y6X4 670 aa19.3■□□□□ 0.68
SQSTM1-211ENST00000506690 A0A087X0B3 334 aa19.29■□□□□ 0.68
SQSTM1-211ENST00000506690 CDC25AP30304 524 aa19.29■□□□□ 0.68
SQSTM1-211ENST00000506690 CCT5P48643 541 aa19.29■□□□□ 0.68
SQSTM1-211ENST00000506690 KRT31Q15323 416 aa19.29■□□□□ 0.68
SQSTM1-211ENST00000506690 NFXL1Q6ZNB6 911 aa19.29■□□□□ 0.68
SQSTM1-211ENST00000506690 PAXIP1Q6ZW49 1069 aaPredicted RBP19.29■□□□□ 0.68
SQSTM1-211ENST00000506690 PAGE5Q96GU1 130 aa19.29■□□□□ 0.68
SQSTM1-211ENST00000506690 CRACR2AQ9BSW2 395 aa19.29■□□□□ 0.68
SQSTM1-211ENST00000506690 CWC25Q9NXE8 425 aaPredicted RBP19.29■□□□□ 0.68
SQSTM1-211ENST00000506690 HDAC6Q9UBN7 1215 aa19.29■□□□□ 0.68
SQSTM1-211ENST00000506690 TRIM10Q9UDY6 481 aa19.29■□□□□ 0.68
SQSTM1-211ENST00000506690 GUCA1BQ9UMX6 200 aa19.29■□□□□ 0.68
SQSTM1-211ENST00000506690 KCNJ14Q9UNX9 436 aa19.29■□□□□ 0.68
SQSTM1-211ENST00000506690 CEP131Q9UPN4 1083 aa19.29■□□□□ 0.68
SQSTM1-211ENST00000506690 TBC1D2BQ9UPU7 963 aa19.29■□□□□ 0.68
SQSTM1-211ENST00000506690 SAR1BQ9Y6B6 198 aa19.29■□□□□ 0.68
SQSTM1-211ENST00000506690 EPN1Q9Y6I3 576 aaPredicted RBP19.29■□□□□ 0.68
SQSTM1-211ENST00000506690 EBAG9O00559 213 aa19.29■□□□□ 0.68
SQSTM1-211ENST00000506690 NDUFA10O95299 355 aa19.29■□□□□ 0.68
SQSTM1-211ENST00000506690 CCT6AP40227 531 aaKnown RBP19.29■□□□□ 0.68
SQSTM1-211ENST00000506690 DPYDQ12882 1025 aa19.29■□□□□ 0.68
SQSTM1-211ENST00000506690 NUP88Q99567 741 aaPredicted RBP19.29■□□□□ 0.68
SQSTM1-211ENST00000506690 SELENOOQ9BVL4 669 aa19.29■□□□□ 0.68
SQSTM1-211ENST00000506690 ENC1O14682 589 aa19.28■□□□□ 0.68
SQSTM1-211ENST00000506690 LIFRP42702 1097 aa19.28■□□□□ 0.68
SQSTM1-211ENST00000506690 LIG3P49916 1009 aa19.28■□□□□ 0.68
SQSTM1-211ENST00000506690 SKIDA1Q1XH10 827 aa19.28■□□□□ 0.68
SQSTM1-211ENST00000506690 SMYD4Q8IYR2 804 aaPredicted RBP19.28■□□□□ 0.68
SQSTM1-211ENST00000506690 HAUS4Q9H6D7 363 aa19.28■□□□□ 0.68
SQSTM1-211ENST00000506690 AATFQ9NY61 560 aaKnown RBP eCLIP19.28■□□□□ 0.68
SQSTM1-211ENST00000506690 AXIN2Q9Y2T1 843 aa19.28■□□□□ 0.68
SQSTM1-211ENST00000506690 NID2Q14112 1375 aa19.28■□□□□ 0.68
SQSTM1-211ENST00000506690 GOLGA6CA6NDK9 693 aa19.27■□□□□ 0.68
SQSTM1-211ENST00000506690 N4BP3O15049 544 aa19.27■□□□□ 0.68
SQSTM1-211ENST00000506690 ATP1A1P05023 1023 aaKnown RBP19.27■□□□□ 0.68
SQSTM1-211ENST00000506690 GOLGA6DP0CG33 693 aa19.27■□□□□ 0.68
SQSTM1-211ENST00000506690 MYBL2P10244 700 aa19.27■□□□□ 0.68
SQSTM1-211ENST00000506690 KRT9P35527 623 aa19.27■□□□□ 0.68
SQSTM1-211ENST00000506690 AFMP43652 599 aa19.27■□□□□ 0.68
SQSTM1-211ENST00000506690 CCNI2Q6ZMN8 369 aaPredicted RBP19.27■□□□□ 0.68
SQSTM1-211ENST00000506690 CHP1Q99653 195 aa19.27■□□□□ 0.68
SQSTM1-211ENST00000506690 GOLGA6AQ9NYA3 693 aa19.27■□□□□ 0.68
SQSTM1-211ENST00000506690 ATRNO75882 1429 aa19.27■□□□□ 0.68
SQSTM1-211ENST00000506690 STRCQ7RTU9 1775 aa19.27■□□□□ 0.68
SQSTM1-211ENST00000506690 CASP1P29466 404 aa19.27■□□□□ 0.68
SQSTM1-211ENST00000506690 PPFIA1Q13136 1202 aa19.27■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms