RNA–Protein interactions for RNA: ENST00000506443.5

COPS4-204, Transcript of COP9 signalosome subunit 4, humanhuman

TSL 4

Gene COPS4, Length 578 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS4-204ENST00000506443 PDE3AQ14432 1141 aa11.07□□□□□ -0.64
COPS4-204ENST00000506443 ALDH1L2Q3SY69 923 aa11.07□□□□□ -0.64
COPS4-204ENST00000506443 WDR78Q5VTH9 848 aa11.07□□□□□ -0.64
COPS4-204ENST00000506443 SPTY2D1Q68D10 685 aaPredicted RBP11.07□□□□□ -0.64
COPS4-204ENST00000506443 PLEKHH3Q7Z736 793 aa11.07□□□□□ -0.64
COPS4-204ENST00000506443 MAPKAPK5Q8IW41 473 aa11.07□□□□□ -0.64
COPS4-204ENST00000506443 FERMT2Q96AC1 680 aa11.07□□□□□ -0.64
COPS4-204ENST00000506443 LENG1Q96BZ8 264 aaPredicted RBP11.07□□□□□ -0.64
COPS4-204ENST00000506443 NSUN4Q96CB9 384 aaKnown RBP11.07□□□□□ -0.64
COPS4-204ENST00000506443 XAGE2Q96GT9 111 aa11.07□□□□□ -0.64
COPS4-204ENST00000506443 NECAB3Q96P71 396 aaPredicted RBP11.07□□□□□ -0.64
COPS4-204ENST00000506443 HMG20BQ9P0W2 317 aa11.07□□□□□ -0.64
COPS4-204ENST00000506443 BTBD7Q9P203 1132 aa11.07□□□□□ -0.64
COPS4-204ENST00000506443 DDX20Q9UHI6 824 aaKnown RBP11.07□□□□□ -0.64
COPS4-204ENST00000506443 BDP1A6H8Y1 2624 aa11.07□□□□□ -0.64
COPS4-204ENST00000506443 MYO9BQ13459 2157 aa11.07□□□□□ -0.64
COPS4-204ENST00000506443 NCOR1O75376 2440 aa11.07□□□□□ -0.64
COPS4-204ENST00000506443 REV3LO60673 3130 aa11.07□□□□□ -0.64
COPS4-204ENST00000506443 A0A1B0GUL7 405 aa11.06□□□□□ -0.64
COPS4-204ENST00000506443 MAP4K4O95819 1239 aaPredicted RBP11.06□□□□□ -0.64
COPS4-204ENST00000506443 CYBAP13498 195 aa11.06□□□□□ -0.64
COPS4-204ENST00000506443 HOXA7P31268 230 aaPredicted RBP11.06□□□□□ -0.64
COPS4-204ENST00000506443 BACE1P56817 501 aa11.06□□□□□ -0.64
COPS4-204ENST00000506443 SLFN5Q08AF3 891 aa11.06□□□□□ -0.64
COPS4-204ENST00000506443 MAP2K5Q13163 448 aa11.06□□□□□ -0.64
COPS4-204ENST00000506443 TEX11Q8IYF3 940 aa11.06□□□□□ -0.64
COPS4-204ENST00000506443 PPM1EQ8WY54 764 aa11.06□□□□□ -0.64
COPS4-204ENST00000506443 WDR18Q9BV38 432 aa11.06□□□□□ -0.64
COPS4-204ENST00000506443 TBC1D2Q9BYX2 928 aa11.06□□□□□ -0.64
COPS4-204ENST00000506443 SAP30BPQ9UHR5 308 aaKnown RBP11.06□□□□□ -0.64
COPS4-204ENST00000506443 ZBTB21Q9ULJ3 1066 aa11.06□□□□□ -0.64
COPS4-204ENST00000506443 PARP14Q460N5 1801 aa11.06□□□□□ -0.64
COPS4-204ENST00000506443 SMCHD1A6NHR9 2005 aa11.06□□□□□ -0.64
COPS4-204ENST00000506443 CHD9Q3L8U1 2897 aa11.06□□□□□ -0.64
COPS4-204ENST00000506443 TMEM265A0A087WTH1 108 aa11.05□□□□□ -0.64
COPS4-204ENST00000506443 E9PSI1 815 aa11.05□□□□□ -0.64
COPS4-204ENST00000506443 RBAK-RBAKDNI3L0D1 243 aa11.05□□□□□ -0.64
COPS4-204ENST00000506443 ANP32CO43423 234 aa11.05□□□□□ -0.64
COPS4-204ENST00000506443 MAPK4P31152 587 aa11.05□□□□□ -0.64
COPS4-204ENST00000506443 TFCP2Q12800 502 aa11.05□□□□□ -0.64
COPS4-204ENST00000506443 PABPC4Q13310 644 aaKnown RBP eCLIP11.05□□□□□ -0.64
COPS4-204ENST00000506443 FAM47AQ5JRC9 791 aa11.05□□□□□ -0.64
COPS4-204ENST00000506443 PRAMEF19Q5SWL8 479 aa11.05□□□□□ -0.64
COPS4-204ENST00000506443 ERICH6Q7L0X2 663 aa11.05□□□□□ -0.64
COPS4-204ENST00000506443 METTL16Q86W50 562 aaKnown RBP11.05□□□□□ -0.64
COPS4-204ENST00000506443 TRMT2AQ8IZ69 625 aaKnown RBP11.05□□□□□ -0.64
COPS4-204ENST00000506443 TRPC6Q9Y210 931 aa11.05□□□□□ -0.64
COPS4-204ENST00000506443 FLT1P17948 1338 aa11.05□□□□□ -0.64
COPS4-204ENST00000506443 COL11A1P12107 1806 aaPredicted RBP11.05□□□□□ -0.64
COPS4-204ENST00000506443 TNFRSF10AO00220 468 aa11.04□□□□□ -0.64
COPS4-204ENST00000506443 DNM1LO00429 736 aa11.04□□□□□ -0.64
COPS4-204ENST00000506443 IGHA2P01877 340 aa11.04□□□□□ -0.64
COPS4-204ENST00000506443 MCAMP43121 646 aa11.04□□□□□ -0.64
COPS4-204ENST00000506443 SPATA5Q8NB90 893 aa11.04□□□□□ -0.64
COPS4-204ENST00000506443 ACER1Q8TDN7 264 aa11.04□□□□□ -0.64
COPS4-204ENST00000506443 MEIS3Q99687 375 aa11.04□□□□□ -0.64
COPS4-204ENST00000506443 SNRKQ9NRH2 765 aa11.04□□□□□ -0.64
COPS4-204ENST00000506443 AATFQ9NY61 560 aaKnown RBP eCLIP11.04□□□□□ -0.64
COPS4-204ENST00000506443 TMOD4Q9NZQ9 345 aa11.04□□□□□ -0.64
COPS4-204ENST00000506443 RAI14Q9P0K7 980 aa11.04□□□□□ -0.64
COPS4-204ENST00000506443 HERC5Q9UII4 1024 aaKnown RBP11.04□□□□□ -0.64
COPS4-204ENST00000506443 PALD1Q9ULE6 856 aa11.04□□□□□ -0.64
COPS4-204ENST00000506443 NOB1Q9ULX3 412 aaKnown RBP11.04□□□□□ -0.64
COPS4-204ENST00000506443 NAV1Q8NEY1 1877 aa11.04□□□□□ -0.64
COPS4-204ENST00000506443 GRXCR1A8MXD5 290 aa11.03□□□□□ -0.64
COPS4-204ENST00000506443 GH2P01242 217 aa11.03□□□□□ -0.64
COPS4-204ENST00000506443 LDHCP07864 332 aa11.03□□□□□ -0.64
COPS4-204ENST00000506443 PBX2P40425 430 aa11.03□□□□□ -0.64
COPS4-204ENST00000506443 ADCYAP1R1P41586 468 aa11.03□□□□□ -0.64
COPS4-204ENST00000506443 SMAD3P84022 425 aaKnown RBP11.03□□□□□ -0.64
COPS4-204ENST00000506443 MTX1Q13505 466 aa11.03□□□□□ -0.64
COPS4-204ENST00000506443 MVPQ14764 893 aaKnown RBP11.03□□□□□ -0.64
COPS4-204ENST00000506443 SNX17Q15036 470 aa11.03□□□□□ -0.64
COPS4-204ENST00000506443 TJAP1Q5JTD0 557 aa11.03□□□□□ -0.64
COPS4-204ENST00000506443 SLC39A5Q6ZMH5 540 aa11.03□□□□□ -0.64
COPS4-204ENST00000506443 TGFBRAP1Q8WUH2 860 aa11.03□□□□□ -0.64
COPS4-204ENST00000506443 LPAR1Q92633 364 aa11.03□□□□□ -0.64
COPS4-204ENST00000506443 EDC3Q96F86 508 aaKnown RBP11.03□□□□□ -0.64
COPS4-204ENST00000506443 CDCA7LQ96GN5 454 aa11.03□□□□□ -0.64
COPS4-204ENST00000506443 RNPC3Q96LT9 517 aaKnown RBP11.03□□□□□ -0.64
COPS4-204ENST00000506443 AS3MTQ9HBK9 375 aa11.03□□□□□ -0.64
COPS4-204ENST00000506443 BMP2KQ9NSY1 1161 aaPredicted RBP11.03□□□□□ -0.64
COPS4-204ENST00000506443 PI4KBQ9UBF8 816 aa11.03□□□□□ -0.64
COPS4-204ENST00000506443 AKAP2Q9Y2D5 859 aa11.03□□□□□ -0.64
COPS4-204ENST00000506443 CHD7Q9P2D1 2997 aa11.03□□□□□ -0.64
COPS4-204ENST00000506443 SPDYE16A6NNV3 312 aaPredicted RBP11.02□□□□□ -0.65
COPS4-204ENST00000506443 USP17L10C9JJH3 530 aa11.02□□□□□ -0.65
COPS4-204ENST00000506443 PTPREP23469 700 aa11.02□□□□□ -0.65
COPS4-204ENST00000506443 DNAJB2P25686 324 aa11.02□□□□□ -0.65
COPS4-204ENST00000506443 ARID4AP29374 1257 aaPredicted RBP11.02□□□□□ -0.65
COPS4-204ENST00000506443 PLA2G5P39877 138 aa11.02□□□□□ -0.65
COPS4-204ENST00000506443 PPP4CP60510 307 aa11.02□□□□□ -0.65
COPS4-204ENST00000506443 DYNLL1P63167 89 aaKnown RBP11.02□□□□□ -0.65
COPS4-204ENST00000506443 IRX5P78411 483 aaPredicted RBP11.02□□□□□ -0.65
COPS4-204ENST00000506443 GSTO1P78417 241 aa11.02□□□□□ -0.65
COPS4-204ENST00000506443 TLE2Q04725 743 aa11.02□□□□□ -0.65
COPS4-204ENST00000506443 GRB14Q14449 540 aa11.02□□□□□ -0.65
COPS4-204ENST00000506443 CLEC10AQ8IUN9 316 aa11.02□□□□□ -0.65
COPS4-204ENST00000506443 SMC4Q9NTJ3 1288 aa11.02□□□□□ -0.65
COPS4-204ENST00000506443 PRKAG2Q9UGJ0 569 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms