RNA–Protein interactions for RNA: ENST00000506426.1

TRAPPC11-205, Transcript of trafficking protein particle complex 11, humanhuman

TSL 2

Gene TRAPPC11, Length 395 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-205ENST00000506426 KIAA1211LQ6NV74 962 aa4.57□□□□□ -1.68
TRAPPC11-205ENST00000506426 KIAA0907Q7Z7F0 614 aaPredicted RBP4.57□□□□□ -1.68
TRAPPC11-205ENST00000506426 HID1Q8IV36 788 aa4.57□□□□□ -1.68
TRAPPC11-205ENST00000506426 MCATQ8IVS2 390 aaKnown RBP4.57□□□□□ -1.68
TRAPPC11-205ENST00000506426 SYNPOQ8N3V7 929 aa4.57□□□□□ -1.68
TRAPPC11-205ENST00000506426 FAM13CQ8NE31 585 aa4.57□□□□□ -1.68
TRAPPC11-205ENST00000506426 ACSF2Q96CM8 615 aaPredicted RBP4.57□□□□□ -1.68
TRAPPC11-205ENST00000506426 DHRS1Q96LJ7 313 aa4.57□□□□□ -1.68
TRAPPC11-205ENST00000506426 FEZ1Q99689 392 aa4.57□□□□□ -1.68
TRAPPC11-205ENST00000506426 LEMD3Q9Y2U8 911 aa4.57□□□□□ -1.68
TRAPPC11-205ENST00000506426 PCDHGC5Q9Y5F6 944 aa4.57□□□□□ -1.68
TRAPPC11-205ENST00000506426 COL4A3BPQ9Y5P4 624 aa4.57□□□□□ -1.68
TRAPPC11-205ENST00000506426 PTCH2Q9Y6C5 1203 aa4.57□□□□□ -1.68
TRAPPC11-205ENST00000506426 FAM86C2PA6NEL3 165 aa4.56□□□□□ -1.68
TRAPPC11-205ENST00000506426 AGRPO00253 132 aa4.56□□□□□ -1.68
TRAPPC11-205ENST00000506426 TMPRSS2O15393 492 aa4.56□□□□□ -1.68
TRAPPC11-205ENST00000506426 SUSD5O60279 629 aa4.56□□□□□ -1.68
TRAPPC11-205ENST00000506426 DEAF1O75398 565 aaPredicted RBP4.56□□□□□ -1.68
TRAPPC11-205ENST00000506426 COL9A3Q14050 684 aaPredicted RBP4.56□□□□□ -1.68
TRAPPC11-205ENST00000506426 LONRF2Q1L5Z9 754 aa4.56□□□□□ -1.68
TRAPPC11-205ENST00000506426 ZC3H12BQ5HYM0 836 aaKnown RBP4.56□□□□□ -1.68
TRAPPC11-205ENST00000506426 AKAP4Q5JQC9 854 aa4.56□□□□□ -1.68
TRAPPC11-205ENST00000506426 ARTNQ5T4W7 220 aa4.56□□□□□ -1.68
TRAPPC11-205ENST00000506426 CDC37L1Q7L3B6 337 aa4.56□□□□□ -1.68
TRAPPC11-205ENST00000506426 FBXO11Q86XK2 927 aa4.56□□□□□ -1.68
TRAPPC11-205ENST00000506426 SLFN12Q8IYM2 578 aa4.56□□□□□ -1.68
TRAPPC11-205ENST00000506426 PHACTR4Q8IZ21 702 aa4.56□□□□□ -1.68
TRAPPC11-205ENST00000506426 LRRC47Q8N1G4 583 aaKnown RBP4.56□□□□□ -1.68
TRAPPC11-205ENST00000506426 KCT2Q8NC54 265 aa4.56□□□□□ -1.68
TRAPPC11-205ENST00000506426 RNF214Q8ND24 703 aa4.56□□□□□ -1.68
TRAPPC11-205ENST00000506426 ZSWIM2Q8NEG5 633 aa4.56□□□□□ -1.68
TRAPPC11-205ENST00000506426 TMEM87BQ96K49 555 aa4.56□□□□□ -1.68
TRAPPC11-205ENST00000506426 SPATA9Q9BWV2 254 aa4.56□□□□□ -1.68
TRAPPC11-205ENST00000506426 ATXN3LQ9H3M9 355 aa4.56□□□□□ -1.68
TRAPPC11-205ENST00000506426 KCNK4Q9NYG8 393 aa4.56□□□□□ -1.68
TRAPPC11-205ENST00000506426 CRIM1Q9NZV1 1036 aa4.56□□□□□ -1.68
TRAPPC11-205ENST00000506426 TJP2Q9UDY2 1190 aa4.56□□□□□ -1.68
TRAPPC11-205ENST00000506426 ZNF214Q9UL59 606 aaPredicted RBP4.56□□□□□ -1.68
TRAPPC11-205ENST00000506426 PPP1R9AQ9ULJ8 1098 aa4.56□□□□□ -1.68
TRAPPC11-205ENST00000506426 PCDHB10Q9UN67 800 aa4.56□□□□□ -1.68
TRAPPC11-205ENST00000506426 MYO15BQ96JP2 1530 aa4.56□□□□□ -1.68
TRAPPC11-205ENST00000506426 KRTAP4-8A0A0G2JLE6 195 aa4.55□□□□□ -1.68
TRAPPC11-205ENST00000506426 MEGF11A6BM72 1044 aa4.55□□□□□ -1.68
TRAPPC11-205ENST00000506426 RGS13O14921 159 aa4.55□□□□□ -1.68
TRAPPC11-205ENST00000506426 DYRK3O43781 588 aa4.55□□□□□ -1.68
TRAPPC11-205ENST00000506426 ASMTLO95671 621 aa4.55□□□□□ -1.68
TRAPPC11-205ENST00000506426 NAT2P11245 290 aa4.55□□□□□ -1.68
TRAPPC11-205ENST00000506426 GBP1P32455 592 aa4.55□□□□□ -1.68
TRAPPC11-205ENST00000506426 RAC1P63000 192 aa4.55□□□□□ -1.68
TRAPPC11-205ENST00000506426 PRSS36Q5K4E3 855 aa4.55□□□□□ -1.68
TRAPPC11-205ENST00000506426 NUTM2GQ5VZR2 741 aa4.55□□□□□ -1.68
TRAPPC11-205ENST00000506426 MRPL41Q8IXM3 137 aaKnown RBP4.55□□□□□ -1.68
TRAPPC11-205ENST00000506426 UBASH3BQ8TF42 649 aa4.55□□□□□ -1.68
TRAPPC11-205ENST00000506426 KLHL6Q8WZ60 621 aa4.55□□□□□ -1.68
TRAPPC11-205ENST00000506426 CCDC74BQ96LY2 380 aa4.55□□□□□ -1.68
TRAPPC11-205ENST00000506426 FANCD2OSQ96PS1 177 aa4.55□□□□□ -1.68
TRAPPC11-205ENST00000506426 SLC26A8Q96RN1 970 aa4.55□□□□□ -1.68
TRAPPC11-205ENST00000506426 RUSC1Q9BVN2 902 aa4.55□□□□□ -1.68
TRAPPC11-205ENST00000506426 TMPRSS13Q9BYE2 586 aa4.55□□□□□ -1.68
TRAPPC11-205ENST00000506426 CYP4F12Q9HCS2 524 aa4.55□□□□□ -1.68
TRAPPC11-205ENST00000506426 ZFP64Q9NPA5 681 aa4.55□□□□□ -1.68
TRAPPC11-205ENST00000506426 PCDH12Q9NPG4 1184 aa4.55□□□□□ -1.68
TRAPPC11-205ENST00000506426 DISC1Q9NRI5 854 aa4.55□□□□□ -1.68
TRAPPC11-205ENST00000506426 NOP53Q9NZM5 478 aaKnown RBP4.55□□□□□ -1.68
TRAPPC11-205ENST00000506426 A0A0A0MRY4 1105 aa4.54□□□□□ -1.68
TRAPPC11-205ENST00000506426 CCDC163A0A0D9SF12 145 aa4.54□□□□□ -1.68
TRAPPC11-205ENST00000506426 DLL1O00548 723 aa4.54□□□□□ -1.68
TRAPPC11-205ENST00000506426 FAM153BP0C7A2 387 aa4.54□□□□□ -1.68
TRAPPC11-205ENST00000506426 POLR2BP30876 1174 aaKnown RBP4.54□□□□□ -1.68
TRAPPC11-205ENST00000506426 ZNF143P52747 638 aaPredicted RBP4.54□□□□□ -1.68
TRAPPC11-205ENST00000506426 PMS1P54277 932 aaKnown RBP4.54□□□□□ -1.68
TRAPPC11-205ENST00000506426 SLC10A6Q3KNW5 377 aa4.54□□□□□ -1.68
TRAPPC11-205ENST00000506426 TMEM67Q5HYA8 995 aa4.54□□□□□ -1.68
TRAPPC11-205ENST00000506426 ZBTB38Q8NAP3 1195 aaPredicted RBP4.54□□□□□ -1.68
TRAPPC11-205ENST00000506426 SMG8Q8ND04 991 aaKnown RBP4.54□□□□□ -1.68
TRAPPC11-205ENST00000506426 SGSM3Q96HU1 749 aa4.54□□□□□ -1.68
TRAPPC11-205ENST00000506426 KIF2CQ99661 725 aa4.54□□□□□ -1.68
TRAPPC11-205ENST00000506426 APBA2Q99767 749 aa4.54□□□□□ -1.68
TRAPPC11-205ENST00000506426 RNF208Q9H0X6 261 aa4.54□□□□□ -1.68
TRAPPC11-205ENST00000506426 SUCOQ9UBS9 1254 aaKnown RBP4.54□□□□□ -1.68
TRAPPC11-205ENST00000506426 AP4E1Q9UPM8 1137 aa4.54□□□□□ -1.68
TRAPPC11-205ENST00000506426 CECR2Q9BXF3 1484 aa4.54□□□□□ -1.68
TRAPPC11-205ENST00000506426 ANKRD34BA5PLL1 514 aa4.53□□□□□ -1.68
TRAPPC11-205ENST00000506426 RNGTTO60942 597 aaKnown RBP4.53□□□□□ -1.68
TRAPPC11-205ENST00000506426 CLEC3AO75596 197 aa4.53□□□□□ -1.68
TRAPPC11-205ENST00000506426 ADH5P11766 374 aa4.53□□□□□ -1.68
TRAPPC11-205ENST00000506426 MASP1P48740 699 aa4.53□□□□□ -1.68
TRAPPC11-205ENST00000506426 SOX4Q06945 474 aaPredicted RBP4.53□□□□□ -1.68
TRAPPC11-205ENST00000506426 TTLL4Q14679 1199 aa4.53□□□□□ -1.68
TRAPPC11-205ENST00000506426 TKFCQ3LXA3 575 aa4.53□□□□□ -1.68
TRAPPC11-205ENST00000506426 SV2CQ496J9 727 aa4.53□□□□□ -1.68
TRAPPC11-205ENST00000506426 ACAD11Q709F0 780 aa4.53□□□□□ -1.68
TRAPPC11-205ENST00000506426 DYMQ7RTS9 669 aa4.53□□□□□ -1.68
TRAPPC11-205ENST00000506426 FMR1NBQ8N0W7 255 aaPredicted RBP4.53□□□□□ -1.68
TRAPPC11-205ENST00000506426 C12orf50Q8NA57 414 aaPredicted RBP4.53□□□□□ -1.68
TRAPPC11-205ENST00000506426 SMARCC1Q92922 1105 aaPredicted RBP4.53□□□□□ -1.68
TRAPPC11-205ENST00000506426 SLC6A18Q96N87 628 aa4.53□□□□□ -1.68
TRAPPC11-205ENST00000506426 IPO9Q96P70 1041 aaKnown RBP4.53□□□□□ -1.68
TRAPPC11-205ENST00000506426 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP4.53□□□□□ -1.68
TRAPPC11-205ENST00000506426 SUGCTQ9HAC7 445 aa4.53□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms