RNA–Protein interactions for RNA: ENST00000505982.1

CHD1-204, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 3

Gene CHD1, Length 758 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-204ENST00000505982 CCDC84Q86UT8 332 aaPredicted RBP8.93□□□□□ -0.98
CHD1-204ENST00000505982 FAM177A1Q8N128 213 aaPredicted RBP8.93□□□□□ -0.98
CHD1-204ENST00000505982 FBXO27Q8NI29 283 aa8.93□□□□□ -0.98
CHD1-204ENST00000505982 STK35Q8TDR2 534 aa8.93□□□□□ -0.98
CHD1-204ENST00000505982 GATAD2BQ8WXI9 593 aa8.93□□□□□ -0.98
CHD1-204ENST00000505982 ANAPC16Q96DE5 110 aa8.93□□□□□ -0.98
CHD1-204ENST00000505982 ZSWIM4Q9H7M6 989 aa8.93□□□□□ -0.98
CHD1-204ENST00000505982 ZNF408Q9H9D4 720 aa8.93□□□□□ -0.98
CHD1-204ENST00000505982 ROBO2Q9HCK4 1378 aa8.93□□□□□ -0.98
CHD1-204ENST00000505982 LEFTY1O75610 366 aa8.92□□□□□ -0.98
CHD1-204ENST00000505982 OXCT1P55809 520 aa8.92□□□□□ -0.98
CHD1-204ENST00000505982 ANGEL2Q5VTE6 544 aaKnown RBP8.92□□□□□ -0.98
CHD1-204ENST00000505982 FBXW10Q5XX13 1052 aa8.92□□□□□ -0.98
CHD1-204ENST00000505982 GRIN3AQ8TCU5 1115 aa8.92□□□□□ -0.98
CHD1-204ENST00000505982 KCNB2Q92953 911 aa8.92□□□□□ -0.98
CHD1-204ENST00000505982 DUSP23Q9BVJ7 150 aa8.92□□□□□ -0.98
CHD1-204ENST00000505982 SRRTQ9BXP5 876 aaKnown RBP8.92□□□□□ -0.98
CHD1-204ENST00000505982 R3HCC1Q9Y3T6 440 aaKnown RBP8.92□□□□□ -0.98
CHD1-204ENST00000505982 HCLS1P14317 486 aaPredicted RBP8.91□□□□□ -0.98
CHD1-204ENST00000505982 MPP2Q14168 576 aa8.91□□□□□ -0.98
CHD1-204ENST00000505982 MAP1SQ66K74 1059 aaPredicted RBP8.91□□□□□ -0.98
CHD1-204ENST00000505982 CCDC81Q6ZN84 652 aa8.91□□□□□ -0.98
CHD1-204ENST00000505982 SLITRK4Q8IW52 837 aa8.91□□□□□ -0.98
CHD1-204ENST00000505982 ACSBG1Q96GR2 724 aa8.91□□□□□ -0.98
CHD1-204ENST00000505982 FERD3LQ96RJ6 166 aa8.91□□□□□ -0.98
CHD1-204ENST00000505982 OSBPL2Q9H1P3 480 aa8.91□□□□□ -0.98
CHD1-204ENST00000505982 SSU72Q9NP77 194 aaKnown RBP8.91□□□□□ -0.98
CHD1-204ENST00000505982 PCDHGC5Q9Y5F6 944 aa8.91□□□□□ -0.98
CHD1-204ENST00000505982 SLC23A3Q6PIS1 610 aa8.9□□□□□ -0.98
CHD1-204ENST00000505982 NOP9Q86U38 636 aaKnown RBP8.9□□□□□ -0.98
CHD1-204ENST00000505982 FAM84AQ96KN4 292 aa8.9□□□□□ -0.98
CHD1-204ENST00000505982 TRIM55Q9BYV6 548 aa8.9□□□□□ -0.98
CHD1-204ENST00000505982 PPT2Q9UMR5 302 aa8.9□□□□□ -0.98
CHD1-204ENST00000505982 SNX11Q9Y5W9 270 aa8.9□□□□□ -0.98
CHD1-204ENST00000505982 U3KQE9 123 aa8.9□□□□□ -0.98
CHD1-204ENST00000505982 ETFBP38117 255 aa8.89□□□□□ -0.99
CHD1-204ENST00000505982 ZNF165P49910 485 aa8.89□□□□□ -0.99
CHD1-204ENST00000505982 BMS1Q14692 1282 aaKnown RBP8.89□□□□□ -0.99
CHD1-204ENST00000505982 GIMAP6Q6P9H5 292 aa8.89□□□□□ -0.99
CHD1-204ENST00000505982 SPOCD1Q6ZMY3 1216 aa8.89□□□□□ -0.99
CHD1-204ENST00000505982 ANKS3Q6ZW76 656 aa8.89□□□□□ -0.99
CHD1-204ENST00000505982 CRBNQ96SW2 442 aa8.89□□□□□ -0.99
CHD1-204ENST00000505982 LRRC3Q9BY71 257 aa8.89□□□□□ -0.99
CHD1-204ENST00000505982 FAM53CQ9NYF3 392 aa8.89□□□□□ -0.99
CHD1-204ENST00000505982 PLAGL2Q9UPG8 496 aa8.89□□□□□ -0.99
CHD1-204ENST00000505982 FAM221AA4D161 298 aa8.88□□□□□ -0.99
CHD1-204ENST00000505982 U2SURPO15042 1029 aaKnown RBP8.88□□□□□ -0.99
CHD1-204ENST00000505982 CILPO75339 1184 aa8.88□□□□□ -0.99
CHD1-204ENST00000505982 GK5Q6ZS86 529 aa8.88□□□□□ -0.99
CHD1-204ENST00000505982 REC114Q7Z4M0 266 aa8.88□□□□□ -0.99
CHD1-204ENST00000505982 PHF6Q8IWS0 365 aaKnown RBP eCLIP8.88□□□□□ -0.99
CHD1-204ENST00000505982 BHLHE22Q8NFJ8 381 aaPredicted RBP8.88□□□□□ -0.99
CHD1-204ENST00000505982 GAL3ST3Q96A11 431 aa8.88□□□□□ -0.99
CHD1-204ENST00000505982 LRRC10BA6NIK2 292 aa8.87□□□□□ -0.99
CHD1-204ENST00000505982 TRIM37O94972 964 aa8.87□□□□□ -0.99
CHD1-204ENST00000505982 ITIH2P19823 946 aa8.87□□□□□ -0.99
CHD1-204ENST00000505982 EIF6P56537 245 aaKnown RBP8.87□□□□□ -0.99
CHD1-204ENST00000505982 ZNF252P-AS1Q0IIN9 211 aa8.87□□□□□ -0.99
CHD1-204ENST00000505982 NBPF6Q5VWK0 638 aa8.87□□□□□ -0.99
CHD1-204ENST00000505982 TOP6BLQ8N6T0 577 aa8.87□□□□□ -0.99
CHD1-204ENST00000505982 FLAD1Q8NFF5 587 aa8.87□□□□□ -0.99
CHD1-204ENST00000505982 NBPF4Q96M43 638 aa8.87□□□□□ -0.99
CHD1-204ENST00000505982 TNKS2Q9H2K2 1166 aa8.87□□□□□ -0.99
CHD1-204ENST00000505982 BRMS1Q9HCU9 246 aa8.87□□□□□ -0.99
CHD1-204ENST00000505982 TMA7Q9Y2S6 64 aaKnown RBP8.87□□□□□ -0.99
CHD1-204ENST00000505982 RPL6Q02878 288 aaKnown RBP8.86□□□□□ -0.99
CHD1-204ENST00000505982 KRTAP19-4Q3LI73 84 aa8.86□□□□□ -0.99
CHD1-204ENST00000505982 LCE4AQ5TA78 99 aa8.86□□□□□ -0.99
CHD1-204ENST00000505982 MPRIPQ6WCQ1 1025 aa8.86□□□□□ -0.99
CHD1-204ENST00000505982 PDZD3Q86UT5 571 aa8.86□□□□□ -0.99
CHD1-204ENST00000505982 ZSWIM9Q86XI8 627 aa8.86□□□□□ -0.99
CHD1-204ENST00000505982 RNF214Q8ND24 703 aa8.86□□□□□ -0.99
CHD1-204ENST00000505982 HNRNPLLQ8WVV9 542 aaKnown RBP8.86□□□□□ -0.99
CHD1-204ENST00000505982 ASB11Q8WXH4 323 aa8.86□□□□□ -0.99
CHD1-204ENST00000505982 ISL2Q96A47 359 aa8.86□□□□□ -0.99
CHD1-204ENST00000505982 PCDHA4Q9UN74 947 aa8.86□□□□□ -0.99
CHD1-204ENST00000505982 NEFMP07197 916 aa8.85□□□□□ -0.99
CHD1-204ENST00000505982 CANXP27824 592 aaKnown RBP8.85□□□□□ -0.99
CHD1-204ENST00000505982 PTPN11Q06124 597 aaPredicted RBP8.85□□□□□ -0.99
CHD1-204ENST00000505982 MESP2Q0VG99 397 aa8.85□□□□□ -0.99
CHD1-204ENST00000505982 NFE2L2Q16236 605 aa8.85□□□□□ -0.99
CHD1-204ENST00000505982 SCARA3Q6AZY7 606 aa8.85□□□□□ -0.99
CHD1-204ENST00000505982 GPBAR1Q8TDU6 330 aa8.85□□□□□ -0.99
CHD1-204ENST00000505982 PIF1Q9H611 641 aa8.85□□□□□ -0.99
CHD1-204ENST00000505982 PRKAG3Q9UGI9 489 aa8.85□□□□□ -0.99
CHD1-204ENST00000505982 GTF2IRD1Q9UHL9 959 aa8.85□□□□□ -0.99
CHD1-204ENST00000505982 GRIN3BO60391 1043 aa8.84□□□□□ -0.99
CHD1-204ENST00000505982 ERVK-24P63145 666 aa8.84□□□□□ -0.99
CHD1-204ENST00000505982 KCNMB1Q16558 191 aa8.84□□□□□ -0.99
CHD1-204ENST00000505982 TNNI3KQ59H18 835 aa8.84□□□□□ -0.99
CHD1-204ENST00000505982 ZC3H12AQ5D1E8 599 aaKnown RBP8.84□□□□□ -0.99
CHD1-204ENST00000505982 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.84□□□□□ -0.99
CHD1-204ENST00000505982 MRFAP1L1Q96HT8 127 aa8.84□□□□□ -0.99
CHD1-204ENST00000505982 SHDQ96IW2 340 aa8.84□□□□□ -0.99
CHD1-204ENST00000505982 SMAD7O15105 426 aaKnown RBP8.83□□□□□ -1
CHD1-204ENST00000505982 IMPDH2P12268 514 aa8.83□□□□□ -1
CHD1-204ENST00000505982 CLCQ05315 142 aa8.83□□□□□ -1
CHD1-204ENST00000505982 IKZF1Q13422 519 aa8.83□□□□□ -1
CHD1-204ENST00000505982 REXO1Q8N1G1 1221 aaKnown RBP8.83□□□□□ -1
CHD1-204ENST00000505982 HEXIM2Q96MH2 286 aaKnown RBP8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms