RNA–Protein interactions for RNA: ENST00000505760.5

HERC4-212, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 4

Gene HERC4, Length 578 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-212ENST00000505760 TRIOBPQ9H2D6 2365 aa29.89■■■□□ 2.37
HERC4-212ENST00000505760 CRISPLD2Q9H0B8 497 aa29.88■■■□□ 2.37
HERC4-212ENST00000505760 HMX1Q9NP08 348 aaPredicted RBP29.88■■■□□ 2.37
HERC4-212ENST00000505760 USP17L15C9J2P7 530 aa29.87■■■□□ 2.37
HERC4-212ENST00000505760 USP17L13C9JLJ4 530 aa29.87■■■□□ 2.37
HERC4-212ENST00000505760 USP17L11C9JVI0 530 aa29.87■■■□□ 2.37
HERC4-212ENST00000505760 USP17L18D6R9N7 530 aa29.87■■■□□ 2.37
HERC4-212ENST00000505760 USP17L22D6RA61 530 aa29.87■■■□□ 2.37
HERC4-212ENST00000505760 USP17L17D6RBQ6 530 aa29.87■■■□□ 2.37
HERC4-212ENST00000505760 USP17L19D6RCP7 530 aa29.87■■■□□ 2.37
HERC4-212ENST00000505760 USP17L20D6RJB6 530 aa29.87■■■□□ 2.37
HERC4-212ENST00000505760 USP17L24Q0WX57 530 aa29.87■■■□□ 2.37
HERC4-212ENST00000505760 CHRDL2Q6WN34 429 aa29.87■■■□□ 2.37
HERC4-212ENST00000505760 EDC3Q96F86 508 aaKnown RBP29.87■■■□□ 2.37
HERC4-212ENST00000505760 KIAA1683Q9H0B3 1180 aa29.87■■■□□ 2.37
HERC4-212ENST00000505760 PAG1Q9NWQ8 432 aa29.87■■■□□ 2.37
HERC4-212ENST00000505760 RPTORQ8N122 1335 aa29.87■■■□□ 2.37
HERC4-212ENST00000505760 TCRBV5S4A2TA0A5A2 114 aa29.86■■■□□ 2.37
HERC4-212ENST00000505760 FXR1P51114 621 aaKnown RBP eCLIP29.86■■■□□ 2.37
HERC4-212ENST00000505760 TRIM32Q13049 653 aa29.86■■■□□ 2.37
HERC4-212ENST00000505760 Q3C1V9 767 aa29.86■■■□□ 2.37
HERC4-212ENST00000505760 ACER1Q8TDN7 264 aa29.86■■■□□ 2.37
HERC4-212ENST00000505760 SDR42E1Q8WUS8 393 aa29.86■■■□□ 2.37
HERC4-212ENST00000505760 TRIB2Q92519 343 aa29.86■■■□□ 2.37
HERC4-212ENST00000505760 BOLA2Q9H3K6 86 aa29.86■■■□□ 2.37
HERC4-212ENST00000505760 CWC22Q9HCG8 908 aaKnown RBP29.86■■■□□ 2.37
HERC4-212ENST00000505760 LCORLQ8N3X6 602 aa29.85■■■□□ 2.37
HERC4-212ENST00000505760 PORCNQ9H237 461 aa29.85■■■□□ 2.37
HERC4-212ENST00000505760 XRCC5P13010 732 aaKnown RBP29.84■■■□□ 2.37
HERC4-212ENST00000505760 VCAM1P19320 739 aa29.84■■■□□ 2.37
HERC4-212ENST00000505760 GABPAQ06546 454 aa29.84■■■□□ 2.37
HERC4-212ENST00000505760 GPR142Q7Z601 462 aa29.84■■■□□ 2.37
HERC4-212ENST00000505760 PAWRQ96IZ0 340 aaKnown RBP29.84■■■□□ 2.37
HERC4-212ENST00000505760 DDX24Q9GZR7 859 aaKnown RBP eCLIP29.84■■■□□ 2.37
HERC4-212ENST00000505760 DCP1AQ9NPI6 582 aaPredicted RBP29.84■■■□□ 2.37
HERC4-212ENST00000505760 RABGAP1Q9Y3P9 1069 aa29.84■■■□□ 2.37
HERC4-212ENST00000505760 RANBP2P49792 3224 aaKnown RBP29.84■■■□□ 2.37
HERC4-212ENST00000505760 MPHOSPH10O00566 681 aaKnown RBP29.83■■■□□ 2.37
HERC4-212ENST00000505760 EVI5O60447 810 aa29.83■■■□□ 2.37
HERC4-212ENST00000505760 ATP5JP18859 108 aa29.83■■■□□ 2.37
HERC4-212ENST00000505760 SEPT2Q15019 361 aa29.83■■■□□ 2.37
HERC4-212ENST00000505760 CATSPERGQ6ZRH7 1159 aa29.83■■■□□ 2.37
HERC4-212ENST00000505760 PLEKHH3Q7Z736 793 aa29.83■■■□□ 2.37
HERC4-212ENST00000505760 TRMT44Q8IYL2 757 aaKnown RBP29.83■■■□□ 2.37
HERC4-212ENST00000505760 ARMT1Q9H993 441 aa29.83■■■□□ 2.37
HERC4-212ENST00000505760 MYH8P13535 1937 aa29.83■■■□□ 2.37
HERC4-212ENST00000505760 CCNA1P78396 465 aa29.82■■■□□ 2.36
HERC4-212ENST00000505760 POTEEQ6S8J3 1075 aa29.82■■■□□ 2.36
HERC4-212ENST00000505760 NECAB2Q7Z6G3 386 aa29.82■■■□□ 2.36
HERC4-212ENST00000505760 ANKLE1Q8NAG6 615 aa29.82■■■□□ 2.36
HERC4-212ENST00000505760 PRKAR2AP13861 404 aaKnown RBP29.81■■■□□ 2.36
HERC4-212ENST00000505760 ZKSCAN1P17029 563 aaPredicted RBP29.81■■■□□ 2.36
HERC4-212ENST00000505760 GUCY1A2P33402 732 aa29.81■■■□□ 2.36
HERC4-212ENST00000505760 RGS2P41220 211 aa29.81■■■□□ 2.36
HERC4-212ENST00000505760 EVX2Q03828 476 aa29.81■■■□□ 2.36
HERC4-212ENST00000505760 HAUS7Q99871 368 aa29.81■■■□□ 2.36
HERC4-212ENST00000505760 RPAP3Q9H6T3 665 aaPredicted RBP29.81■■■□□ 2.36
HERC4-212ENST00000505760 MYH7P12883 1935 aa29.81■■■□□ 2.36
HERC4-212ENST00000505760 MBD4O95243 580 aa29.8■■■□□ 2.36
HERC4-212ENST00000505760 ADD2P35612 726 aa29.8■■■□□ 2.36
HERC4-212ENST00000505760 C20orf194Q5TEA3 1177 aa29.8■■■□□ 2.36
HERC4-212ENST00000505760 DIS3LQ8TF46 1054 aaKnown RBP29.8■■■□□ 2.36
HERC4-212ENST00000505760 LRRCC1Q9C099 1032 aa29.8■■■□□ 2.36
HERC4-212ENST00000505760 BAZ2AQ9UIF9 1905 aaKnown RBP29.8■■■□□ 2.36
HERC4-212ENST00000505760 GLRX3O76003 335 aaKnown RBP29.79■■■□□ 2.36
HERC4-212ENST00000505760 CYP2D6P10635 497 aa29.79■■■□□ 2.36
HERC4-212ENST00000505760 SLFNL1Q499Z3 407 aa29.79■■■□□ 2.36
HERC4-212ENST00000505760 MORN1Q5T089 497 aa29.79■■■□□ 2.36
HERC4-212ENST00000505760 MAP3K21Q5TCX8 1036 aa29.79■■■□□ 2.36
HERC4-212ENST00000505760 WDR78Q5VTH9 848 aa29.79■■■□□ 2.36
HERC4-212ENST00000505760 USP6NLQ92738 828 aa29.79■■■□□ 2.36
HERC4-212ENST00000505760 RBM27Q9P2N5 1060 aaKnown RBP29.79■■■□□ 2.36
HERC4-212ENST00000505760 SWAP70Q9UH65 585 aa29.79■■■□□ 2.36
HERC4-212ENST00000505760 CNMDO75829 334 aa29.78■■■□□ 2.36
HERC4-212ENST00000505760 APBA2Q99767 749 aa29.78■■■□□ 2.36
HERC4-212ENST00000505760 ATP8A2Q9NTI2 1148 aa29.78■■■□□ 2.36
HERC4-212ENST00000505760 PRKAB2O43741 272 aa29.77■■■□□ 2.36
HERC4-212ENST00000505760 LBX2Q6XYB7 198 aa29.77■■■□□ 2.36
HERC4-212ENST00000505760 TMEM179Q6ZVK1 233 aa29.77■■■□□ 2.36
HERC4-212ENST00000505760 SLC44A5Q8NCS7 719 aa29.77■■■□□ 2.36
HERC4-212ENST00000505760 NBPF3Q9H094 633 aa29.77■■■□□ 2.36
HERC4-212ENST00000505760 ALPK3Q96L96 1907 aa29.77■■■□□ 2.36
HERC4-212ENST00000505760 CCL14Q16627 93 aa29.76■■■□□ 2.35
HERC4-212ENST00000505760 AMOTL1Q8IY63 956 aa29.76■■■□□ 2.35
HERC4-212ENST00000505760 DYNLL2Q96FJ2 89 aa29.76■■■□□ 2.35
HERC4-212ENST00000505760 A0A1W2PRG0 241 aa29.75■■■□□ 2.35
HERC4-212ENST00000505760 SPDYE16A6NNV3 312 aaPredicted RBP29.75■■■□□ 2.35
HERC4-212ENST00000505760 CACNB2Q08289 660 aaPredicted RBP29.75■■■□□ 2.35
HERC4-212ENST00000505760 MAP2K5Q13163 448 aa29.75■■■□□ 2.35
HERC4-212ENST00000505760 DDRGK1Q96HY6 314 aa29.75■■■□□ 2.35
HERC4-212ENST00000505760 BTBD7Q9P203 1132 aa29.75■■■□□ 2.35
HERC4-212ENST00000505760 OGDHLQ9ULD0 1010 aa29.75■■■□□ 2.35
HERC4-212ENST00000505760 IVNS1ABPQ9Y6Y0 642 aa29.75■■■□□ 2.35
HERC4-212ENST00000505760 SMARCA5O60264 1052 aaPredicted RBP29.74■■■□□ 2.35
HERC4-212ENST00000505760 UBE3CQ15386 1083 aa29.74■■■□□ 2.35
HERC4-212ENST00000505760 ZSCAN25Q6NSZ9 544 aa29.74■■■□□ 2.35
HERC4-212ENST00000505760 TANGO6Q9C0B7 1094 aa29.74■■■□□ 2.35
HERC4-212ENST00000505760 COG2Q14746 738 aa29.73■■■□□ 2.35
HERC4-212ENST00000505760 SZT2Q5T011 3432 aa29.73■■■□□ 2.35
HERC4-212ENST00000505760 SLC15A5A6NIM6 579 aa29.72■■■□□ 2.35
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms