RNA–Protein interactions for RNA: ENST00000505728.1

COL4A5-208, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 3

Gene COL4A5, Length 537 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-208ENST00000505728 TAOK3Q9H2K8 898 aa9.35□□□□□ -0.91
COL4A5-208ENST00000505728 RCOR1Q9UKL0 485 aa9.35□□□□□ -0.91
COL4A5-208ENST00000505728 SCN9AQ15858 1988 aa9.35□□□□□ -0.91
COL4A5-208ENST00000505728 F8W031 263 aaPredicted RBP9.34□□□□□ -0.91
COL4A5-208ENST00000505728 PRPF3O43395 683 aaKnown RBP9.34□□□□□ -0.91
COL4A5-208ENST00000505728 LETM1O95202 739 aaPredicted RBP9.34□□□□□ -0.91
COL4A5-208ENST00000505728 TSPY3P0CV98 308 aa9.34□□□□□ -0.91
COL4A5-208ENST00000505728 TSPY8P0CW00 308 aa9.34□□□□□ -0.91
COL4A5-208ENST00000505728 RASA1P20936 1047 aa9.34□□□□□ -0.91
COL4A5-208ENST00000505728 GNAQP50148 359 aa9.34□□□□□ -0.91
COL4A5-208ENST00000505728 SCNN1DP51172 638 aa9.34□□□□□ -0.91
COL4A5-208ENST00000505728 FOSBP53539 338 aa9.34□□□□□ -0.91
COL4A5-208ENST00000505728 AKAP17AQ02040 695 aaKnown RBP9.34□□□□□ -0.91
COL4A5-208ENST00000505728 TROAPQ12815 778 aa9.34□□□□□ -0.91
COL4A5-208ENST00000505728 KRT40Q6A162 431 aa9.34□□□□□ -0.91
COL4A5-208ENST00000505728 APOBEC3HQ6NTF7 200 aaKnown RBP9.34□□□□□ -0.91
COL4A5-208ENST00000505728 DPY19L2Q6NUT2 758 aa9.34□□□□□ -0.91
COL4A5-208ENST00000505728 CDC42EP5Q6NZY7 148 aa9.34□□□□□ -0.91
COL4A5-208ENST00000505728 FAM173BQ6P4H8 233 aa9.34□□□□□ -0.91
COL4A5-208ENST00000505728 NBPF11Q86T75 865 aa9.34□□□□□ -0.91
COL4A5-208ENST00000505728 CTCFLQ8NI51 663 aaPredicted RBP9.34□□□□□ -0.91
COL4A5-208ENST00000505728 SPATA32Q96LK8 384 aa9.34□□□□□ -0.91
COL4A5-208ENST00000505728 MXD3Q9BW11 206 aa9.34□□□□□ -0.91
COL4A5-208ENST00000505728 KAT14Q9H8E8 782 aa9.34□□□□□ -0.91
COL4A5-208ENST00000505728 TFIP11Q9UBB9 837 aaKnown RBP9.34□□□□□ -0.91
COL4A5-208ENST00000505728 SWAP70Q9UH65 585 aa9.34□□□□□ -0.91
COL4A5-208ENST00000505728 SAP30BPQ9UHR5 308 aaKnown RBP9.34□□□□□ -0.91
COL4A5-208ENST00000505728 SERPINA10Q9UK55 444 aa9.34□□□□□ -0.91
COL4A5-208ENST00000505728 MYH15Q9Y2K3 1946 aa9.34□□□□□ -0.91
COL4A5-208ENST00000505728 BAZ2BQ9UIF8 2168 aaKnown RBP9.34□□□□□ -0.91
COL4A5-208ENST00000505728 MYO3BQ8WXR4 1341 aa9.33□□□□□ -0.92
COL4A5-208ENST00000505728 GOLGA6L4A6NEF3 574 aa9.33□□□□□ -0.92
COL4A5-208ENST00000505728 WDHD1O75717 1129 aaPredicted RBP9.33□□□□□ -0.92
COL4A5-208ENST00000505728 HLA-DOAP06340 250 aa9.33□□□□□ -0.92
COL4A5-208ENST00000505728 XBP1P17861 261 aa9.33□□□□□ -0.92
COL4A5-208ENST00000505728 KIF5BP33176 963 aa9.33□□□□□ -0.92
COL4A5-208ENST00000505728 MRE11P49959 708 aa9.33□□□□□ -0.92
COL4A5-208ENST00000505728 GUCY1B3Q02153 619 aa9.33□□□□□ -0.92
COL4A5-208ENST00000505728 KIF23Q02241 960 aaPredicted RBP9.33□□□□□ -0.92
COL4A5-208ENST00000505728 EVX2Q03828 476 aa9.33□□□□□ -0.92
COL4A5-208ENST00000505728 SAFBQ15424 915 aaKnown RBP eCLIP9.33□□□□□ -0.92
COL4A5-208ENST00000505728 ZSCAN23Q3MJ62 389 aa9.33□□□□□ -0.92
COL4A5-208ENST00000505728 OTUD7BQ6GQQ9 843 aa9.33□□□□□ -0.92
COL4A5-208ENST00000505728 RCSD1Q6JBY9 416 aa9.33□□□□□ -0.92
COL4A5-208ENST00000505728 PHKBQ93100 1093 aa9.33□□□□□ -0.92
COL4A5-208ENST00000505728 IDI2Q9BXS1 227 aa9.33□□□□□ -0.92
COL4A5-208ENST00000505728 RNF39Q9H2S5 420 aa9.33□□□□□ -0.92
COL4A5-208ENST00000505728 KCNQ5Q9NR82 932 aa9.33□□□□□ -0.92
COL4A5-208ENST00000505728 IL17RBQ9NRM6 502 aa9.33□□□□□ -0.92
COL4A5-208ENST00000505728 RTEL1Q9NZ71 1219 aa9.33□□□□□ -0.92
COL4A5-208ENST00000505728 TMEM63CQ9P1W3 806 aa9.33□□□□□ -0.92
COL4A5-208ENST00000505728 RBM27Q9P2N5 1060 aaKnown RBP9.33□□□□□ -0.92
COL4A5-208ENST00000505728 COL4A5P29400 1685 aa9.32□□□□□ -0.92
COL4A5-208ENST00000505728 YDJCA8MPS7 323 aa9.32□□□□□ -0.92
COL4A5-208ENST00000505728 PPFIA3O75145 1194 aa9.32□□□□□ -0.92
COL4A5-208ENST00000505728 YEATS4O95619 227 aa9.32□□□□□ -0.92
COL4A5-208ENST00000505728 VIL1P09327 827 aaKnown RBP9.32□□□□□ -0.92
COL4A5-208ENST00000505728 U2AF2P26368 475 aaKnown RBP eCLIP9.32□□□□□ -0.92
COL4A5-208ENST00000505728 NOVP48745 357 aa9.32□□□□□ -0.92
COL4A5-208ENST00000505728 GABPAQ06546 454 aa9.32□□□□□ -0.92
COL4A5-208ENST00000505728 FUT2Q10981 343 aa9.32□□□□□ -0.92
COL4A5-208ENST00000505728 PPP4R3BQ5MIZ7 849 aa9.32□□□□□ -0.92
COL4A5-208ENST00000505728 CCDC183Q5T5S1 534 aa9.32□□□□□ -0.92
COL4A5-208ENST00000505728 MYSM1Q5VVJ2 828 aa9.32□□□□□ -0.92
COL4A5-208ENST00000505728 TMTC3Q6ZXV5 915 aa9.32□□□□□ -0.92
COL4A5-208ENST00000505728 KIAA0825Q8IV33 1275 aa9.32□□□□□ -0.92
COL4A5-208ENST00000505728 LARGE2Q8N3Y3 721 aa9.32□□□□□ -0.92
COL4A5-208ENST00000505728 AIFM3Q96NN9 605 aa9.32□□□□□ -0.92
COL4A5-208ENST00000505728 LZTS2Q9BRK4 669 aa9.32□□□□□ -0.92
COL4A5-208ENST00000505728 OSBPL5Q9H0X9 879 aaPredicted RBP9.32□□□□□ -0.92
COL4A5-208ENST00000505728 EHD4Q9H223 541 aa9.32□□□□□ -0.92
COL4A5-208ENST00000505728 DHX36Q9H2U1 1008 aaKnown RBP9.32□□□□□ -0.92
COL4A5-208ENST00000505728 DDX4Q9NQI0 724 aaKnown RBP9.32□□□□□ -0.92
COL4A5-208ENST00000505728 PSME4Q14997 1843 aa9.32□□□□□ -0.92
COL4A5-208ENST00000505728 ZNF541Q9H0D2 1346 aa9.31□□□□□ -0.92
COL4A5-208ENST00000505728 DDX60LQ5H9U9 1706 aaKnown RBP9.31□□□□□ -0.92
COL4A5-208ENST00000505728 ECM29Q5VYK3 1845 aa9.31□□□□□ -0.92
COL4A5-208ENST00000505728 NMT2O60551 498 aa9.31□□□□□ -0.92
COL4A5-208ENST00000505728 ENTPD3O75355 529 aa9.31□□□□□ -0.92
COL4A5-208ENST00000505728 HSPA1AP0DMV8 641 aaKnown RBP9.31□□□□□ -0.92
COL4A5-208ENST00000505728 HSPA1BP0DMV9 641 aaKnown RBP9.31□□□□□ -0.92
COL4A5-208ENST00000505728 SMARCA1P28370 1054 aa9.31□□□□□ -0.92
COL4A5-208ENST00000505728 MMP14P50281 582 aa9.31□□□□□ -0.92
COL4A5-208ENST00000505728 RBM5P52756 815 aaKnown RBP eCLIP9.31□□□□□ -0.92
COL4A5-208ENST00000505728 PICALMQ13492 652 aa9.31□□□□□ -0.92
COL4A5-208ENST00000505728 GNL2Q13823 731 aaKnown RBP9.31□□□□□ -0.92
COL4A5-208ENST00000505728 GRM4Q14833 912 aa9.31□□□□□ -0.92
COL4A5-208ENST00000505728 SLC4A8Q2Y0W8 1093 aa9.31□□□□□ -0.92
COL4A5-208ENST00000505728 CHADLQ6NUI6 762 aa9.31□□□□□ -0.92
COL4A5-208ENST00000505728 RSBN1LQ6PCB5 846 aaPredicted RBP9.31□□□□□ -0.92
COL4A5-208ENST00000505728 LRSAM1Q6UWE0 723 aa9.31□□□□□ -0.92
COL4A5-208ENST00000505728 GAS2L3Q86XJ1 694 aa9.31□□□□□ -0.92
COL4A5-208ENST00000505728 FOXP4Q8IVH2 680 aaPredicted RBP9.31□□□□□ -0.92
COL4A5-208ENST00000505728 SLC44A5Q8NCS7 719 aa9.31□□□□□ -0.92
COL4A5-208ENST00000505728 PNMA1Q8ND90 353 aa9.31□□□□□ -0.92
COL4A5-208ENST00000505728 CCDC17Q96LX7 622 aa9.31□□□□□ -0.92
COL4A5-208ENST00000505728 USP28Q96RU2 1077 aa9.31□□□□□ -0.92
COL4A5-208ENST00000505728 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.31□□□□□ -0.92
COL4A5-208ENST00000505728 FOXP1Q9H334 677 aaPredicted RBP9.31□□□□□ -0.92
COL4A5-208ENST00000505728 ZNF277Q9NRM2 450 aaPredicted RBP9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms