RNA–Protein interactions for RNA: ENST00000505657.1

CHD1-203, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 3

Gene CHD1, Length 736 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-203ENST00000505657 CCDC81Q6ZN84 652 aa6.43□□□□□ -1.38
CHD1-203ENST00000505657 REXO1Q8N1G1 1221 aaKnown RBP6.43□□□□□ -1.38
CHD1-203ENST00000505657 MFSD2AQ8NA29 543 aa6.43□□□□□ -1.38
CHD1-203ENST00000505657 GIMAP7Q8NHV1 300 aa6.43□□□□□ -1.38
CHD1-203ENST00000505657 RASGRP4Q8TDF6 673 aa6.43□□□□□ -1.38
CHD1-203ENST00000505657 PPP1R13LQ8WUF5 828 aa6.43□□□□□ -1.38
CHD1-203ENST00000505657 METTL22Q9BUU2 404 aaPredicted RBP6.43□□□□□ -1.38
CHD1-203ENST00000505657 ANGEL1Q9UNK9 670 aaKnown RBP6.43□□□□□ -1.38
CHD1-203ENST00000505657 EFR3BQ9Y2G0 817 aa6.43□□□□□ -1.38
CHD1-203ENST00000505657 CYP26A1O43174 497 aa6.42□□□□□ -1.38
CHD1-203ENST00000505657 FOSL1P15407 271 aa6.42□□□□□ -1.38
CHD1-203ENST00000505657 ZNF165P49910 485 aa6.42□□□□□ -1.38
CHD1-203ENST00000505657 CYP27A1Q02318 531 aa6.42□□□□□ -1.38
CHD1-203ENST00000505657 CYP27C1Q4G0S4 372 aa6.42□□□□□ -1.38
CHD1-203ENST00000505657 CBLL1Q75N03 491 aa6.42□□□□□ -1.38
CHD1-203ENST00000505657 CDH24Q86UP0 819 aa6.42□□□□□ -1.38
CHD1-203ENST00000505657 POU5F2Q8N7G0 328 aa6.42□□□□□ -1.38
CHD1-203ENST00000505657 DNAJB8Q8NHS0 232 aa6.42□□□□□ -1.38
CHD1-203ENST00000505657 BAHD1Q8TBE0 780 aaPredicted RBP6.42□□□□□ -1.38
CHD1-203ENST00000505657 TINF2Q9BSI4 451 aa6.42□□□□□ -1.38
CHD1-203ENST00000505657 CCDC39Q9UFE4 941 aa6.42□□□□□ -1.38
CHD1-203ENST00000505657 ZC3H7BQ9UGR2 993 aaKnown RBP6.42□□□□□ -1.38
CHD1-203ENST00000505657 ZNRF3Q9ULT6 936 aa6.42□□□□□ -1.38
CHD1-203ENST00000505657 INPP5FQ9Y2H2 1132 aa6.42□□□□□ -1.38
CHD1-203ENST00000505657 PRR33A8MZF0 331 aa6.41□□□□□ -1.38
CHD1-203ENST00000505657 POLR2BP30876 1174 aaKnown RBP6.41□□□□□ -1.38
CHD1-203ENST00000505657 SOX9P48436 509 aa6.41□□□□□ -1.38
CHD1-203ENST00000505657 OXCT1P55809 520 aa6.41□□□□□ -1.38
CHD1-203ENST00000505657 CPSF6Q16630 551 aaKnown RBP eCLIP6.41□□□□□ -1.38
CHD1-203ENST00000505657 MSMPQ1L6U9 139 aa6.41□□□□□ -1.38
CHD1-203ENST00000505657 ARSHQ5FYA8 562 aa6.41□□□□□ -1.38
CHD1-203ENST00000505657 NFXL1Q6ZNB6 911 aa6.41□□□□□ -1.38
CHD1-203ENST00000505657 SLFN12Q8IYM2 578 aa6.41□□□□□ -1.38
CHD1-203ENST00000505657 CYB5D2Q8WUJ1 264 aa6.41□□□□□ -1.38
CHD1-203ENST00000505657 ASIC4Q96FT7 647 aa6.41□□□□□ -1.38
CHD1-203ENST00000505657 KIF2CQ99661 725 aa6.41□□□□□ -1.38
CHD1-203ENST00000505657 CAPN10Q9HC96 672 aa6.41□□□□□ -1.38
CHD1-203ENST00000505657 GMIPQ9P107 970 aa6.41□□□□□ -1.38
CHD1-203ENST00000505657 MEIS3P2A8K0S8 358 aa6.4□□□□□ -1.38
CHD1-203ENST00000505657 NASPP49321 788 aaPredicted RBP6.4□□□□□ -1.38
CHD1-203ENST00000505657 YARSP54577 528 aaKnown RBP6.4□□□□□ -1.38
CHD1-203ENST00000505657 LCE4AQ5TA78 99 aa6.4□□□□□ -1.38
CHD1-203ENST00000505657 PLD6Q8N2A8 252 aaKnown RBP6.4□□□□□ -1.38
CHD1-203ENST00000505657 TMEM40Q8WWA1 233 aa6.4□□□□□ -1.38
CHD1-203ENST00000505657 ATG4CQ96DT6 458 aa6.4□□□□□ -1.38
CHD1-203ENST00000505657 TPX2Q9ULW0 747 aaKnown RBP6.4□□□□□ -1.38
CHD1-203ENST00000505657 PLAGL2Q9UPG8 496 aa6.4□□□□□ -1.38
CHD1-203ENST00000505657 ITIH2P19823 946 aa6.39□□□□□ -1.39
CHD1-203ENST00000505657 TP53INP2Q8IXH6 220 aa6.39□□□□□ -1.39
CHD1-203ENST00000505657 PHACTR4Q8IZ21 702 aa6.39□□□□□ -1.39
CHD1-203ENST00000505657 FERD3LQ96RJ6 166 aa6.39□□□□□ -1.39
CHD1-203ENST00000505657 CNNM2Q9H8M5 875 aa6.39□□□□□ -1.39
CHD1-203ENST00000505657 PRDM5Q9NQX1 630 aaPredicted RBP6.39□□□□□ -1.39
CHD1-203ENST00000505657 UBOX5O94941 541 aa6.38□□□□□ -1.39
CHD1-203ENST00000505657 PRNPP04156 253 aa6.38□□□□□ -1.39
CHD1-203ENST00000505657 CEACAM5P06731 702 aa6.38□□□□□ -1.39
CHD1-203ENST00000505657 CDCP2Q5VXM1 449 aa6.38□□□□□ -1.39
CHD1-203ENST00000505657 FBXW10Q5XX13 1052 aa6.38□□□□□ -1.39
CHD1-203ENST00000505657 RUFY4Q6ZNE9 571 aa6.38□□□□□ -1.39
CHD1-203ENST00000505657 NLRC3Q7RTR2 1065 aa6.38□□□□□ -1.39
CHD1-203ENST00000505657 LSRQ86X29 649 aaPredicted RBP6.38□□□□□ -1.39
CHD1-203ENST00000505657 CEP131Q9UPN4 1083 aa6.38□□□□□ -1.39
CHD1-203ENST00000505657 MAPK8IP1Q9UQF2 711 aa6.38□□□□□ -1.39
CHD1-203ENST00000505657 FAM86C2PA6NEL3 165 aa6.37□□□□□ -1.39
CHD1-203ENST00000505657 IGF2BP3O00425 579 aaKnown RBP eCLIP6.37□□□□□ -1.39
CHD1-203ENST00000505657 CBX7O95931 251 aa6.37□□□□□ -1.39
CHD1-203ENST00000505657 ACRP10323 421 aa6.37□□□□□ -1.39
CHD1-203ENST00000505657 NME1P15531 152 aaKnown RBP6.37□□□□□ -1.39
CHD1-203ENST00000505657 RAG1P15918 1043 aa6.37□□□□□ -1.39
CHD1-203ENST00000505657 ITGB5P18084 799 aa6.37□□□□□ -1.39
CHD1-203ENST00000505657 ATF4P18848 351 aaPredicted RBP6.37□□□□□ -1.39
CHD1-203ENST00000505657 MLECQ14165 292 aa6.37□□□□□ -1.39
CHD1-203ENST00000505657 NKPD1Q17RQ9 610 aa6.37□□□□□ -1.39
CHD1-203ENST00000505657 SFRP5Q5T4F7 317 aa6.37□□□□□ -1.39
CHD1-203ENST00000505657 NPM2Q86SE8 214 aaKnown RBP6.37□□□□□ -1.39
CHD1-203ENST00000505657 WFDC3Q8IUB2 231 aa6.37□□□□□ -1.39
CHD1-203ENST00000505657 SPACA3Q8IXA5 215 aa6.37□□□□□ -1.39
CHD1-203ENST00000505657 CCDC74BQ96LY2 380 aa6.37□□□□□ -1.39
CHD1-203ENST00000505657 GTF2IRD1Q9UHL9 959 aa6.37□□□□□ -1.39
CHD1-203ENST00000505657 RGS13O14921 159 aa6.36□□□□□ -1.39
CHD1-203ENST00000505657 LRRN2O75325 713 aa6.36□□□□□ -1.39
CHD1-203ENST00000505657 COL9A2Q14055 689 aaPredicted RBP6.36□□□□□ -1.39
CHD1-203ENST00000505657 ARHGAP27Q6ZUM4 889 aa6.36□□□□□ -1.39
CHD1-203ENST00000505657 NETO1Q8TDF5 533 aa6.36□□□□□ -1.39
CHD1-203ENST00000505657 SHDQ96IW2 340 aa6.36□□□□□ -1.39
CHD1-203ENST00000505657 SPATA32Q96LK8 384 aa6.36□□□□□ -1.39
CHD1-203ENST00000505657 Q96M66 194 aa6.36□□□□□ -1.39
CHD1-203ENST00000505657 FBXL18Q96ME1 805 aa6.36□□□□□ -1.39
CHD1-203ENST00000505657 SLC9A7Q96T83 725 aa6.36□□□□□ -1.39
CHD1-203ENST00000505657 SRRTQ9BXP5 876 aaKnown RBP6.36□□□□□ -1.39
CHD1-203ENST00000505657 CAPN6Q9Y6Q1 641 aa6.36□□□□□ -1.39
CHD1-203ENST00000505657 TNFRSF10CO14798 259 aa6.35□□□□□ -1.39
CHD1-203ENST00000505657 ZNF865P0CJ78 1059 aaPredicted RBP6.35□□□□□ -1.39
CHD1-203ENST00000505657 CD96P40200 585 aa6.35□□□□□ -1.39
CHD1-203ENST00000505657 ETV3P41162 512 aa6.35□□□□□ -1.39
CHD1-203ENST00000505657 ZYXQ15942 572 aaKnown RBP6.35□□□□□ -1.39
CHD1-203ENST00000505657 C22orf34Q6ZV56 151 aa6.35□□□□□ -1.39
CHD1-203ENST00000505657 VSIG10LQ86VR7 867 aa6.35□□□□□ -1.39
CHD1-203ENST00000505657 TMEM192Q8IY95 271 aa6.35□□□□□ -1.39
CHD1-203ENST00000505657 MFSD4AQ8N468 514 aa6.35□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms