RNA–Protein interactions for RNA: ENST00000505625.5

MATR3-211, Transcript of matrin 3, humanhuman

TSL 1 (best)

Gene MATR3, Length 7,306 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-211ENST00000505625 KCNK9Q9NPC2 374 aa5.76□□□□□ -1.49
MATR3-211ENST00000505625 SLAIN2Q9P270 581 aa5.76□□□□□ -1.49
MATR3-211ENST00000505625 PNMA3Q9UL41 463 aa5.76□□□□□ -1.49
MATR3-211ENST00000505625 PTPREP23469 700 aa5.76□□□□□ -1.49
MATR3-211ENST00000505625 PAFAH1B1P43034 410 aa5.76□□□□□ -1.49
MATR3-211ENST00000505625 MRE11P49959 708 aa5.76□□□□□ -1.49
MATR3-211ENST00000505625 MAPK8IP2Q13387 824 aaPredicted RBP5.76□□□□□ -1.49
MATR3-211ENST00000505625 PIK3AP1Q6ZUJ8 805 aa5.76□□□□□ -1.49
MATR3-211ENST00000505625 LRRC47Q8N1G4 583 aaKnown RBP5.76□□□□□ -1.49
MATR3-211ENST00000505625 ARMT1Q9H993 441 aa5.76□□□□□ -1.49
MATR3-211ENST00000505625 MRPL44Q9H9J2 332 aaKnown RBP5.76□□□□□ -1.49
MATR3-211ENST00000505625 HPS4Q9NQG7 708 aa5.76□□□□□ -1.49
MATR3-211ENST00000505625 MYO1AQ9UBC5 1043 aa5.76□□□□□ -1.49
MATR3-211ENST00000505625 NSD3Q9BZ95 1437 aa5.76□□□□□ -1.49
MATR3-211ENST00000505625 NVLO15381 856 aaKnown RBP5.75□□□□□ -1.49
MATR3-211ENST00000505625 TNNC2P02585 160 aa5.75□□□□□ -1.49
MATR3-211ENST00000505625 LIG4P49917 911 aa5.75□□□□□ -1.49
MATR3-211ENST00000505625 KIF11P52732 1056 aa5.75□□□□□ -1.49
MATR3-211ENST00000505625 RPS6KA2Q15349 733 aa5.75□□□□□ -1.49
MATR3-211ENST00000505625 FAM160B1Q5W0V3 765 aa5.75□□□□□ -1.49
MATR3-211ENST00000505625 DCUN1D2Q6PH85 259 aa5.75□□□□□ -1.49
MATR3-211ENST00000505625 ZBTB8OSQ8IWT0 167 aa5.75□□□□□ -1.49
MATR3-211ENST00000505625 SLC12A6Q9UHW9 1150 aa5.75□□□□□ -1.49
MATR3-211ENST00000505625 ADGRL1O94910 1474 aa5.75□□□□□ -1.49
MATR3-211ENST00000505625 AFF2P51816 1311 aa5.75□□□□□ -1.49
MATR3-211ENST00000505625 PI4KAP2A4QPH2 592 aa5.75□□□□□ -1.49
MATR3-211ENST00000505625 APOA4P06727 396 aa5.75□□□□□ -1.49
MATR3-211ENST00000505625 RECQLP46063 649 aaPredicted RBP5.75□□□□□ -1.49
MATR3-211ENST00000505625 CLNS1AP54105 237 aaKnown RBP5.75□□□□□ -1.49
MATR3-211ENST00000505625 BPIFB4P59827 614 aa5.75□□□□□ -1.49
MATR3-211ENST00000505625 SH2D4BQ5SQS7 431 aa5.75□□□□□ -1.49
MATR3-211ENST00000505625 IRAK1BP1Q5VVH5 260 aa5.75□□□□□ -1.49
MATR3-211ENST00000505625 KRT79Q5XKE5 535 aa5.75□□□□□ -1.49
MATR3-211ENST00000505625 SMAP1Q8IYB5 467 aaPredicted RBP5.75□□□□□ -1.49
MATR3-211ENST00000505625 PI4KAP1Q8N8J0 262 aa5.75□□□□□ -1.49
MATR3-211ENST00000505625 CRACR2AQ9BSW2 395 aa5.75□□□□□ -1.49
MATR3-211ENST00000505625 ERICH4A6NGS2 130 aa5.75□□□□□ -1.49
MATR3-211ENST00000505625 BRD1O95696 1058 aa5.75□□□□□ -1.49
MATR3-211ENST00000505625 TOP1P11387 765 aaKnown RBP5.75□□□□□ -1.49
MATR3-211ENST00000505625 ATP2A2P16615 1042 aaKnown RBP5.75□□□□□ -1.49
MATR3-211ENST00000505625 KPNA1P52294 538 aaPredicted RBP5.75□□□□□ -1.49
MATR3-211ENST00000505625 CERKLQ49MI3 558 aaPredicted RBP5.75□□□□□ -1.49
MATR3-211ENST00000505625 C9orf131Q5VYM1 1079 aa5.75□□□□□ -1.49
MATR3-211ENST00000505625 FAM167BQ9BTA0 163 aa5.75□□□□□ -1.49
MATR3-211ENST00000505625 CNOT7Q9UIV1 285 aaKnown RBP5.75□□□□□ -1.49
MATR3-211ENST00000505625 ZNF215Q9UL58 517 aaPredicted RBP5.75□□□□□ -1.49
MATR3-211ENST00000505625 WASLO00401 505 aaPredicted RBP5.75□□□□□ -1.49
MATR3-211ENST00000505625 ZBTB43O43298 467 aa5.75□□□□□ -1.49
MATR3-211ENST00000505625 EVI5O60447 810 aa5.75□□□□□ -1.49
MATR3-211ENST00000505625 SRGAP2CP0DJJ0 459 aa5.75□□□□□ -1.49
MATR3-211ENST00000505625 ACADMP11310 421 aa5.75□□□□□ -1.49
MATR3-211ENST00000505625 SOX5P35711 763 aa5.75□□□□□ -1.49
MATR3-211ENST00000505625 AOC3Q16853 763 aa5.75□□□□□ -1.49
MATR3-211ENST00000505625 MFSD14BQ5SR56 506 aa5.75□□□□□ -1.49
MATR3-211ENST00000505625 CEP68Q76N32 757 aa5.75□□□□□ -1.49
MATR3-211ENST00000505625 PBXIP1Q96AQ6 731 aa5.75□□□□□ -1.49
MATR3-211ENST00000505625 DHX58Q96C10 678 aa5.75□□□□□ -1.49
MATR3-211ENST00000505625 EPC1Q9H2F5 836 aa5.75□□□□□ -1.49
MATR3-211ENST00000505625 AFF4Q9UHB7 1163 aaKnown RBP5.75□□□□□ -1.49
MATR3-211ENST00000505625 DENND2AQ9ULE3 1009 aa5.75□□□□□ -1.49
MATR3-211ENST00000505625 PCDHB7Q9Y5E2 793 aa5.75□□□□□ -1.49
MATR3-211ENST00000505625 UBXN8O00124 270 aa5.75□□□□□ -1.49
MATR3-211ENST00000505625 ITGA6P23229 1130 aa5.75□□□□□ -1.49
MATR3-211ENST00000505625 SFPQP23246 707 aaKnown RBP eCLIP5.75□□□□□ -1.49
MATR3-211ENST00000505625 PIK3CAP42336 1068 aa5.75□□□□□ -1.49
MATR3-211ENST00000505625 CCDC155Q8N6L0 562 aa5.75□□□□□ -1.49
MATR3-211ENST00000505625 CNKSR1Q969H4 720 aa5.75□□□□□ -1.49
MATR3-211ENST00000505625 SH3KBP1Q96B97 665 aa5.75□□□□□ -1.49
MATR3-211ENST00000505625 PGBD1Q96JS3 809 aa5.75□□□□□ -1.49
MATR3-211ENST00000505625 PLVAPQ9BX97 442 aa5.75□□□□□ -1.49
MATR3-211ENST00000505625 CCDC68Q9H2F9 335 aa5.75□□□□□ -1.49
MATR3-211ENST00000505625 TNPO2O14787 897 aaKnown RBP5.75□□□□□ -1.49
MATR3-211ENST00000505625 NBPF7P0C2Y1 421 aaPredicted RBP5.75□□□□□ -1.49
MATR3-211ENST00000505625 NNMTP40261 264 aa5.75□□□□□ -1.49
MATR3-211ENST00000505625 TCEA2Q15560 299 aa5.75□□□□□ -1.49
MATR3-211ENST00000505625 HERC4Q5GLZ8 1057 aaPredicted RBP5.75□□□□□ -1.49
MATR3-211ENST00000505625 ARMCX5Q6P1M9 558 aa5.75□□□□□ -1.49
MATR3-211ENST00000505625 SRGAP1Q7Z6B7 1085 aa5.75□□□□□ -1.49
MATR3-211ENST00000505625 ZSCAN31Q96LW9 406 aaPredicted RBP5.75□□□□□ -1.49
MATR3-211ENST00000505625 RASAL2Q9UJF2 1139 aa5.75□□□□□ -1.49
MATR3-211ENST00000505625 HECW1Q76N89 1606 aa5.75□□□□□ -1.49
MATR3-211ENST00000505625 NOL3O60936 208 aaKnown RBP5.74□□□□□ -1.49
MATR3-211ENST00000505625 RAB11FIP3O75154 756 aa5.74□□□□□ -1.49
MATR3-211ENST00000505625 ATP2B4P23634 1241 aa5.74□□□□□ -1.49
MATR3-211ENST00000505625 MIER3Q7Z3K6 550 aa5.74□□□□□ -1.49
MATR3-211ENST00000505625 TMEM57Q8N5G2 664 aa5.74□□□□□ -1.49
MATR3-211ENST00000505625 RNF139Q8WU17 664 aa5.74□□□□□ -1.49
MATR3-211ENST00000505625 GAS2L1Q99501 681 aaPredicted RBP5.74□□□□□ -1.49
MATR3-211ENST00000505625 MAP3K20Q9NYL2 800 aaKnown RBP5.74□□□□□ -1.49
MATR3-211ENST00000505625 KLF18A0A0U1RQI7 1052 aa5.74□□□□□ -1.49
MATR3-211ENST00000505625 TRIM14Q14142 442 aa5.74□□□□□ -1.49
MATR3-211ENST00000505625 IFI16Q16666 785 aaKnown RBP5.74□□□□□ -1.49
MATR3-211ENST00000505625 RWDD4Q6NW29 188 aaKnown RBP5.74□□□□□ -1.49
MATR3-211ENST00000505625 C1orf131Q8NDD1 294 aaKnown RBP5.74□□□□□ -1.49
MATR3-211ENST00000505625 EVI5LQ96CN4 794 aa5.74□□□□□ -1.49
MATR3-211ENST00000505625 C19orf44Q9H6X5 657 aa5.74□□□□□ -1.49
MATR3-211ENST00000505625 NOL12Q9UGY1 213 aaKnown RBP eCLIP5.74□□□□□ -1.49
MATR3-211ENST00000505625 FIS1Q9Y3D6 152 aa5.74□□□□□ -1.49
MATR3-211ENST00000505625 IQGAP2Q13576 1575 aa5.74□□□□□ -1.49
MATR3-211ENST00000505625 FANCAO15360 1455 aa5.74□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms