RNA–Protein interactions for RNA: ENST00000505589.1

NEDD9-210, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 2

Gene NEDD9, Length 571 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-210ENST00000505589 CATSPERGQ6ZRH7 1159 aa12.11□□□□□ -0.47
NEDD9-210ENST00000505589 MAPKAPK5Q8IW41 473 aa12.11□□□□□ -0.47
NEDD9-210ENST00000505589 ZNF384Q8TF68 577 aa12.11□□□□□ -0.47
NEDD9-210ENST00000505589 ZNF512BQ96KM6 892 aaPredicted RBP12.11□□□□□ -0.47
NEDD9-210ENST00000505589 PALD1Q9ULE6 856 aa12.11□□□□□ -0.47
NEDD9-210ENST00000505589 LOC285556D6RIA3 1793 aa12.1□□□□□ -0.47
NEDD9-210ENST00000505589 MCAMP43121 646 aa12.1□□□□□ -0.47
NEDD9-210ENST00000505589 SMAD3P84022 425 aaKnown RBP12.1□□□□□ -0.47
NEDD9-210ENST00000505589 CCL14Q16627 93 aa12.1□□□□□ -0.47
NEDD9-210ENST00000505589 CERKLQ49MI3 558 aaPredicted RBP12.1□□□□□ -0.47
NEDD9-210ENST00000505589 OLFML2BQ68BL8 750 aa12.1□□□□□ -0.47
NEDD9-210ENST00000505589 SLC39A5Q6ZMH5 540 aa12.1□□□□□ -0.47
NEDD9-210ENST00000505589 MEIS3Q99687 375 aa12.1□□□□□ -0.47
NEDD9-210ENST00000505589 SEMA6BQ9H3T3 888 aa12.1□□□□□ -0.47
NEDD9-210ENST00000505589 SERPINB13Q9UIV8 391 aa12.1□□□□□ -0.47
NEDD9-210ENST00000505589 DDX60LQ5H9U9 1706 aaKnown RBP12.1□□□□□ -0.47
NEDD9-210ENST00000505589 FLT1P17948 1338 aa12.1□□□□□ -0.47
NEDD9-210ENST00000505589 ALPK3Q96L96 1907 aa12.09□□□□□ -0.47
NEDD9-210ENST00000505589 GDF11O95390 407 aa12.09□□□□□ -0.47
NEDD9-210ENST00000505589 USP5P45974 858 aa12.09□□□□□ -0.47
NEDD9-210ENST00000505589 ATN1P54259 1190 aaPredicted RBP12.09□□□□□ -0.47
NEDD9-210ENST00000505589 RTP1P59025 263 aa12.09□□□□□ -0.47
NEDD9-210ENST00000505589 GRB14Q14449 540 aa12.09□□□□□ -0.47
NEDD9-210ENST00000505589 COG2Q14746 738 aa12.09□□□□□ -0.47
NEDD9-210ENST00000505589 RAB3GAP1Q15042 981 aa12.09□□□□□ -0.47
NEDD9-210ENST00000505589 C1orf53Q5VUE5 145 aa12.09□□□□□ -0.47
NEDD9-210ENST00000505589 TATDN1Q6P1N9 297 aa12.09□□□□□ -0.47
NEDD9-210ENST00000505589 MB21D1Q8N884 522 aa12.09□□□□□ -0.47
NEDD9-210ENST00000505589 GUCD1Q96NT3 240 aa12.09□□□□□ -0.47
NEDD9-210ENST00000505589 CDX2Q99626 313 aaPredicted RBP12.09□□□□□ -0.47
NEDD9-210ENST00000505589 KIAA1683Q9H0B3 1180 aa12.09□□□□□ -0.47
NEDD9-210ENST00000505589 EHD4Q9H223 541 aa12.09□□□□□ -0.47
NEDD9-210ENST00000505589 TACC3Q9Y6A5 838 aa12.09□□□□□ -0.47
NEDD9-210ENST00000505589 SEPT4O43236 478 aa12.08□□□□□ -0.48
NEDD9-210ENST00000505589 GH2P01242 217 aa12.08□□□□□ -0.48
NEDD9-210ENST00000505589 OS9Q13438 667 aaPredicted RBP12.08□□□□□ -0.48
NEDD9-210ENST00000505589 ABCB5Q2M3G0 1257 aa12.08□□□□□ -0.48
NEDD9-210ENST00000505589 TRMT2AQ8IZ69 625 aaKnown RBP12.08□□□□□ -0.48
NEDD9-210ENST00000505589 ABRAQ8N0Z2 381 aa12.08□□□□□ -0.48
NEDD9-210ENST00000505589 MAFAQ8NHW3 353 aaPredicted RBP12.08□□□□□ -0.48
NEDD9-210ENST00000505589 FAM161BQ96MY7 647 aa12.08□□□□□ -0.48
NEDD9-210ENST00000505589 MROH8Q9H579 483 aa12.08□□□□□ -0.48
NEDD9-210ENST00000505589 ATP11BQ9Y2G3 1177 aa12.08□□□□□ -0.48
NEDD9-210ENST00000505589 UNC80Q8N2C7 3258 aa12.07□□□□□ -0.48
NEDD9-210ENST00000505589 MAP3K12Q12852 859 aa12.07□□□□□ -0.48
NEDD9-210ENST00000505589 PI16Q6UXB8 463 aa12.07□□□□□ -0.48
NEDD9-210ENST00000505589 SHCBP1Q8NEM2 672 aa12.07□□□□□ -0.48
NEDD9-210ENST00000505589 PRDM6Q9NQX0 595 aa12.07□□□□□ -0.48
NEDD9-210ENST00000505589 NRBP1Q9UHY1 535 aa12.07□□□□□ -0.48
NEDD9-210ENST00000505589 CYP2E1P05181 493 aaPredicted RBP12.06□□□□□ -0.48
NEDD9-210ENST00000505589 VCAM1P19320 739 aa12.06□□□□□ -0.48
NEDD9-210ENST00000505589 CYP7A1P22680 504 aa12.06□□□□□ -0.48
NEDD9-210ENST00000505589 CYP2C19P33261 490 aa12.06□□□□□ -0.48
NEDD9-210ENST00000505589 SHHQ15465 462 aa12.06□□□□□ -0.48
NEDD9-210ENST00000505589 GJC2Q5T442 439 aaPredicted RBP12.06□□□□□ -0.48
NEDD9-210ENST00000505589 DNAJC18Q9H819 358 aa12.06□□□□□ -0.48
NEDD9-210ENST00000505589 PRDM5Q9NQX1 630 aaPredicted RBP12.06□□□□□ -0.48
NEDD9-210ENST00000505589 ATAD5Q96QE3 1844 aa12.06□□□□□ -0.48
NEDD9-210ENST00000505589 PLXNB2O15031 1838 aa12.05□□□□□ -0.48
NEDD9-210ENST00000505589 CNMDO75829 334 aa12.05□□□□□ -0.48
NEDD9-210ENST00000505589 POLR3DP05423 398 aaPredicted RBP12.05□□□□□ -0.48
NEDD9-210ENST00000505589 CYBAP13498 195 aa12.05□□□□□ -0.48
NEDD9-210ENST00000505589 RARSP54136 660 aaKnown RBP12.05□□□□□ -0.48
NEDD9-210ENST00000505589 ZYXQ15942 572 aaKnown RBP12.05□□□□□ -0.48
NEDD9-210ENST00000505589 TNNI3KQ59H18 835 aa12.05□□□□□ -0.48
NEDD9-210ENST00000505589 CCDC174Q6PII3 467 aa12.05□□□□□ -0.48
NEDD9-210ENST00000505589 RNF180Q86T96 592 aa12.05□□□□□ -0.48
NEDD9-210ENST00000505589 SPATC1LQ9H0A9 340 aa12.05□□□□□ -0.48
NEDD9-210ENST00000505589 RPAP3Q9H6T3 665 aaPredicted RBP12.05□□□□□ -0.48
NEDD9-210ENST00000505589 SH2D4AQ9H788 454 aa12.05□□□□□ -0.48
NEDD9-210ENST00000505589 SNRKQ9NRH2 765 aa12.05□□□□□ -0.48
NEDD9-210ENST00000505589 FLRT1Q9NZU1 646 aa12.05□□□□□ -0.48
NEDD9-210ENST00000505589 SAP30BPQ9UHR5 308 aaKnown RBP12.05□□□□□ -0.48
NEDD9-210ENST00000505589 FPGT-TNNI3KV9GXZ4 949 aa12.05□□□□□ -0.48
NEDD9-210ENST00000505589 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.04□□□□□ -0.48
NEDD9-210ENST00000505589 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.04□□□□□ -0.48
NEDD9-210ENST00000505589 SPDYE16A6NNV3 312 aaPredicted RBP12.04□□□□□ -0.48
NEDD9-210ENST00000505589 PEX10O60683 326 aa12.04□□□□□ -0.48
NEDD9-210ENST00000505589 IDH1O75874 414 aaKnown RBP12.04□□□□□ -0.48
NEDD9-210ENST00000505589 SLC25A27O95847 323 aa12.04□□□□□ -0.48
NEDD9-210ENST00000505589 RARBP10826 455 aa12.04□□□□□ -0.48
NEDD9-210ENST00000505589 FCER1AP12319 257 aa12.04□□□□□ -0.48
NEDD9-210ENST00000505589 FOSL2P15408 326 aa12.04□□□□□ -0.48
NEDD9-210ENST00000505589 ADORA2AP29274 412 aa12.04□□□□□ -0.48
NEDD9-210ENST00000505589 JAG1P78504 1218 aa12.04□□□□□ -0.48
NEDD9-210ENST00000505589 SNX17Q15036 470 aa12.04□□□□□ -0.48
NEDD9-210ENST00000505589 NPLOC4Q8TAT6 608 aa12.04□□□□□ -0.48
NEDD9-210ENST00000505589 BADQ92934 168 aa12.04□□□□□ -0.48
NEDD9-210ENST00000505589 CDCA7LQ96GN5 454 aa12.04□□□□□ -0.48
NEDD9-210ENST00000505589 BTBD7Q9P203 1132 aa12.04□□□□□ -0.48
NEDD9-210ENST00000505589 NDUFB9Q9Y6M9 179 aa12.04□□□□□ -0.48
NEDD9-210ENST00000505589 CUL9Q8IWT3 2517 aa12.04□□□□□ -0.48
NEDD9-210ENST00000505589 SURF6O75683 361 aaKnown RBP12.03□□□□□ -0.48
NEDD9-210ENST00000505589 MYCNP04198 464 aaPredicted RBP12.03□□□□□ -0.48
NEDD9-210ENST00000505589 RAG1P15918 1043 aa12.03□□□□□ -0.48
NEDD9-210ENST00000505589 COPB2P35606 906 aa12.03□□□□□ -0.48
NEDD9-210ENST00000505589 ZAP70P43403 619 aa12.03□□□□□ -0.48
NEDD9-210ENST00000505589 ATP8B2P98198 1209 aa12.03□□□□□ -0.48
NEDD9-210ENST00000505589 TTF1Q15361 905 aaPredicted RBP12.03□□□□□ -0.48
NEDD9-210ENST00000505589 NUP133Q8WUM0 1156 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms