RNA–Protein interactions for RNA: ENST00000505074.5

PDLIM7-213, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 931 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-213ENST00000505074 SPTBN5Q9NRC6 3674 aaKnown RBP19.58■□□□□ 0.73
PDLIM7-213ENST00000505074 SIPA1L1O43166 1804 aa19.58■□□□□ 0.73
PDLIM7-213ENST00000505074 C9orf50Q5SZB4 431 aa19.58■□□□□ 0.72
PDLIM7-213ENST00000505074 NAA16Q6N069 864 aaPredicted RBP19.58■□□□□ 0.72
PDLIM7-213ENST00000505074 SSH3Q8TE77 659 aa19.58■□□□□ 0.72
PDLIM7-213ENST00000505074 DBNDD2Q9BQY9 259 aa19.58■□□□□ 0.72
PDLIM7-213ENST00000505074 TTYH1Q9H313 450 aaPredicted RBP19.58■□□□□ 0.72
PDLIM7-213ENST00000505074 CCNA1P78396 465 aa19.57■□□□□ 0.72
PDLIM7-213ENST00000505074 GPR108Q9NPR9 543 aa19.57■□□□□ 0.72
PDLIM7-213ENST00000505074 RLBP1P12271 317 aa19.56■□□□□ 0.72
PDLIM7-213ENST00000505074 ATP2B2Q01814 1243 aa19.56■□□□□ 0.72
PDLIM7-213ENST00000505074 SH3RF3Q8TEJ3 882 aaPredicted RBP19.56■□□□□ 0.72
PDLIM7-213ENST00000505074 DHX36Q9H2U1 1008 aaKnown RBP19.56■□□□□ 0.72
PDLIM7-213ENST00000505074 PRDM5Q9NQX1 630 aaPredicted RBP19.56■□□□□ 0.72
PDLIM7-213ENST00000505074 GINM1Q9NU53 330 aa19.56■□□□□ 0.72
PDLIM7-213ENST00000505074 AATFQ9NY61 560 aaKnown RBP eCLIP19.56■□□□□ 0.72
PDLIM7-213ENST00000505074 TNFRSF10AO00220 468 aa19.55■□□□□ 0.72
PDLIM7-213ENST00000505074 BAG3O95817 575 aa19.55■□□□□ 0.72
PDLIM7-213ENST00000505074 TJAP1Q5JTD0 557 aa19.55■□□□□ 0.72
PDLIM7-213ENST00000505074 WDR78Q5VTH9 848 aa19.55■□□□□ 0.72
PDLIM7-213ENST00000505074 SLC39A5Q6ZMH5 540 aa19.55■□□□□ 0.72
PDLIM7-213ENST00000505074 BADQ92934 168 aa19.55■□□□□ 0.72
PDLIM7-213ENST00000505074 TRIM34Q9BYJ4 488 aa19.55■□□□□ 0.72
PDLIM7-213ENST00000505074 FLRT1Q9NZU1 646 aa19.55■□□□□ 0.72
PDLIM7-213ENST00000505074 RABGAP1Q9Y3P9 1069 aa19.55■□□□□ 0.72
PDLIM7-213ENST00000505074 PRUNE2Q8WUY3 3088 aa19.55■□□□□ 0.72
PDLIM7-213ENST00000505074 CDK5RAP2Q96SN8 1893 aa19.54■□□□□ 0.72
PDLIM7-213ENST00000505074 MYO5AQ9Y4I1 1855 aaKnown RBP19.54■□□□□ 0.72
PDLIM7-213ENST00000505074 TMEM265A0A087WTH1 108 aa19.54■□□□□ 0.72
PDLIM7-213ENST00000505074 SLC15A5A6NIM6 579 aa19.54■□□□□ 0.72
PDLIM7-213ENST00000505074 USP17L2Q6R6M4 530 aa19.54■□□□□ 0.72
PDLIM7-213ENST00000505074 ARRDC4Q8NCT1 418 aa19.54■□□□□ 0.72
PDLIM7-213ENST00000505074 CCDC8Q9H0W5 538 aaPredicted RBP19.54■□□□□ 0.72
PDLIM7-213ENST00000505074 NDUFB9Q9Y6M9 179 aa19.54■□□□□ 0.72
PDLIM7-213ENST00000505074 ZBED9Q6R2W3 1325 aa19.53■□□□□ 0.72
PDLIM7-213ENST00000505074 KBTBD13C9JR72 458 aa19.53■□□□□ 0.72
PDLIM7-213ENST00000505074 PLCG2P16885 1265 aa19.53■□□□□ 0.72
PDLIM7-213ENST00000505074 PTPREP23469 700 aa19.53■□□□□ 0.72
PDLIM7-213ENST00000505074 JAG1P78504 1218 aa19.53■□□□□ 0.72
PDLIM7-213ENST00000505074 GJC2Q5T442 439 aaPredicted RBP19.53■□□□□ 0.72
PDLIM7-213ENST00000505074 FOXP4Q8IVH2 680 aaPredicted RBP19.53■□□□□ 0.72
PDLIM7-213ENST00000505074 CRACR2BQ8N4Y2 399 aaPredicted RBP19.53■□□□□ 0.72
PDLIM7-213ENST00000505074 EMILIN3Q9NT22 766 aa19.53■□□□□ 0.72
PDLIM7-213ENST00000505074 IVNS1ABPQ9Y6Y0 642 aa19.53■□□□□ 0.72
PDLIM7-213ENST00000505074 FOCADQ5VW36 1801 aa19.53■□□□□ 0.72
PDLIM7-213ENST00000505074 GDF11O95390 407 aa19.52■□□□□ 0.72
PDLIM7-213ENST00000505074 CYP2E1P05181 493 aaPredicted RBP19.52■□□□□ 0.72
PDLIM7-213ENST00000505074 ZAP70P43403 619 aa19.52■□□□□ 0.72
PDLIM7-213ENST00000505074 POTEEQ6S8J3 1075 aa19.52■□□□□ 0.72
PDLIM7-213ENST00000505074 MAPKAPK5Q8IW41 473 aa19.52■□□□□ 0.72
PDLIM7-213ENST00000505074 PANK1Q8TE04 598 aa19.52■□□□□ 0.72
PDLIM7-213ENST00000505074 TGFBRAP1Q8WUH2 860 aa19.52■□□□□ 0.72
PDLIM7-213ENST00000505074 TLR7Q9NYK1 1049 aaKnown RBP19.52■□□□□ 0.72
PDLIM7-213ENST00000505074 ZBTB21Q9ULJ3 1066 aa19.52■□□□□ 0.72
PDLIM7-213ENST00000505074 TTC28Q96AY4 2481 aa19.51■□□□□ 0.71
PDLIM7-213ENST00000505074 HOXC6P09630 235 aa19.51■□□□□ 0.71
PDLIM7-213ENST00000505074 CYP2C19P33261 490 aa19.51■□□□□ 0.71
PDLIM7-213ENST00000505074 DBNLQ9UJU6 430 aaKnown RBP19.51■□□□□ 0.71
PDLIM7-213ENST00000505074 NOP58Q9Y2X3 529 aaKnown RBP19.51■□□□□ 0.71
PDLIM7-213ENST00000505074 USP17L15C9J2P7 530 aa19.5■□□□□ 0.71
PDLIM7-213ENST00000505074 USP17L13C9JLJ4 530 aa19.5■□□□□ 0.71
PDLIM7-213ENST00000505074 USP17L11C9JVI0 530 aa19.5■□□□□ 0.71
PDLIM7-213ENST00000505074 USP17L18D6R9N7 530 aa19.5■□□□□ 0.71
PDLIM7-213ENST00000505074 USP17L22D6RA61 530 aa19.5■□□□□ 0.71
PDLIM7-213ENST00000505074 USP17L17D6RBQ6 530 aa19.5■□□□□ 0.71
PDLIM7-213ENST00000505074 USP17L19D6RCP7 530 aa19.5■□□□□ 0.71
PDLIM7-213ENST00000505074 USP17L20D6RJB6 530 aa19.5■□□□□ 0.71
PDLIM7-213ENST00000505074 CNMDO75829 334 aa19.5■□□□□ 0.71
PDLIM7-213ENST00000505074 IDH1O75874 414 aaKnown RBP19.5■□□□□ 0.71
PDLIM7-213ENST00000505074 USP17L24Q0WX57 530 aa19.5■□□□□ 0.71
PDLIM7-213ENST00000505074 SHROOM1Q2M3G4 852 aaPredicted RBP19.5■□□□□ 0.71
PDLIM7-213ENST00000505074 TRIM60Q495X7 471 aa19.5■□□□□ 0.71
PDLIM7-213ENST00000505074 CEP85Q6P2H3 762 aa19.5■□□□□ 0.71
PDLIM7-213ENST00000505074 METTL16Q86W50 562 aaKnown RBP19.5■□□□□ 0.71
PDLIM7-213ENST00000505074 NPLOC4Q8TAT6 608 aa19.5■□□□□ 0.71
PDLIM7-213ENST00000505074 BCL11AQ9H165 835 aa19.5■□□□□ 0.71
PDLIM7-213ENST00000505074 DNAJC18Q9H819 358 aa19.5■□□□□ 0.71
PDLIM7-213ENST00000505074 PDLIM7Q9NR12 457 aa19.5■□□□□ 0.71
PDLIM7-213ENST00000505074 EXOC6BQ9Y2D4 811 aa19.5■□□□□ 0.71
PDLIM7-213ENST00000505074 CYBAP13498 195 aa19.49■□□□□ 0.71
PDLIM7-213ENST00000505074 GRB14Q14449 540 aa19.49■□□□□ 0.71
PDLIM7-213ENST00000505074 SNX17Q15036 470 aa19.49■□□□□ 0.71
PDLIM7-213ENST00000505074 ADGRA1Q86SQ6 560 aa19.49■□□□□ 0.71
PDLIM7-213ENST00000505074 ERC1Q8IUD2 1116 aa19.49■□□□□ 0.71
PDLIM7-213ENST00000505074 TRPV1Q8NER1 839 aa19.49■□□□□ 0.71
PDLIM7-213ENST00000505074 EAF2Q96CJ1 260 aaPredicted RBP19.49■□□□□ 0.71
PDLIM7-213ENST00000505074 RNPC3Q96LT9 517 aaKnown RBP19.49■□□□□ 0.71
PDLIM7-213ENST00000505074 PIH1D3Q9NQM4 214 aaKnown RBP19.49■□□□□ 0.71
PDLIM7-213ENST00000505074 SAP30BPQ9UHR5 308 aaKnown RBP19.49■□□□□ 0.71
PDLIM7-213ENST00000505074 FLT1P17948 1338 aa19.49■□□□□ 0.71
PDLIM7-213ENST00000505074 MYCNP04198 464 aaPredicted RBP19.48■□□□□ 0.71
PDLIM7-213ENST00000505074 CYP7A1P22680 504 aa19.48■□□□□ 0.71
PDLIM7-213ENST00000505074 AACSQ86V21 672 aa19.48■□□□□ 0.71
PDLIM7-213ENST00000505074 ZNF512BQ96KM6 892 aaPredicted RBP19.48■□□□□ 0.71
PDLIM7-213ENST00000505074 C12orf42Q96LP6 360 aa19.48■□□□□ 0.71
PDLIM7-213ENST00000505074 FEZ1Q99689 392 aa19.48■□□□□ 0.71
PDLIM7-213ENST00000505074 TRIM43BA6NCK2 446 aa19.47■□□□□ 0.71
PDLIM7-213ENST00000505074 HLA-DOAP06340 250 aa19.47■□□□□ 0.71
PDLIM7-213ENST00000505074 MS4A1P11836 297 aa19.47■□□□□ 0.71
PDLIM7-213ENST00000505074 DYNLL1P63167 89 aaKnown RBP19.47■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms