RNA–Protein interactions for RNA: ENST00000505073.5

CCSER1-205, Transcript of coiled-coil serine rich protein 1, humanhuman

TSL 1 (best)

Gene CCSER1, Length 2,684 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCSER1-205ENST00000505073 SPATA32Q96LK8 384 aa15.24■□□□□ 0.03
CCSER1-205ENST00000505073 C16orf45Q96MC5 204 aaPredicted RBP15.24■□□□□ 0.03
CCSER1-205ENST00000505073 ATF5Q9Y2D1 282 aaPredicted RBP15.24■□□□□ 0.03
CCSER1-205ENST00000505073 ROBO3Q96MS0 1386 aa15.23■□□□□ 0.03
CCSER1-205ENST00000505073 IFNAR1P17181 557 aa15.23■□□□□ 0.03
CCSER1-205ENST00000505073 LIG1P18858 919 aa15.23■□□□□ 0.03
CCSER1-205ENST00000505073 KCNA3P22001 575 aa15.23■□□□□ 0.03
CCSER1-205ENST00000505073 GUCY1A2P33402 732 aa15.23■□□□□ 0.03
CCSER1-205ENST00000505073 LRMPQ12912 555 aa15.23■□□□□ 0.03
CCSER1-205ENST00000505073 ARHGAP30Q7Z6I6 1101 aaPredicted RBP15.23■□□□□ 0.03
CCSER1-205ENST00000505073 CATIPQ7Z7H3 387 aa15.23■□□□□ 0.03
CCSER1-205ENST00000505073 CBX8Q9HC52 389 aa15.23■□□□□ 0.03
CCSER1-205ENST00000505073 CGNQ9P2M7 1197 aaKnown RBP15.23■□□□□ 0.03
CCSER1-205ENST00000505073 PCDHAC2Q9Y5I4 1007 aa15.23■□□□□ 0.03
CCSER1-205ENST00000505073 PPIP5K2O43314 1243 aa15.23■□□□□ 0.03
CCSER1-205ENST00000505073 FMNL1O95466 1100 aaPredicted RBP15.23■□□□□ 0.03
CCSER1-205ENST00000505073 DACT2Q5SW24 774 aa15.23■□□□□ 0.03
CCSER1-205ENST00000505073 SCAND2PQ9GZW5 306 aaPredicted RBP15.23■□□□□ 0.03
CCSER1-205ENST00000505073 USP40Q9NVE5 1235 aa15.23■□□□□ 0.03
CCSER1-205ENST00000505073 MYH1P12882 1939 aa15.23■□□□□ 0.03
CCSER1-205ENST00000505073 ECM29Q5VYK3 1845 aa15.22■□□□□ 0.03
CCSER1-205ENST00000505073 A0A0U1RQG5 324 aaPredicted RBP15.22■□□□□ 0.03
CCSER1-205ENST00000505073 GABPB1Q06547 395 aaPredicted RBP15.22■□□□□ 0.03
CCSER1-205ENST00000505073 STRIP1Q5VSL9 837 aa15.22■□□□□ 0.03
CCSER1-205ENST00000505073 CC2D2BQ6DHV5 1058 aa15.22■□□□□ 0.03
CCSER1-205ENST00000505073 PLA2G4DQ86XP0 818 aa15.22■□□□□ 0.03
CCSER1-205ENST00000505073 DRC7Q8IY82 874 aa15.22■□□□□ 0.03
CCSER1-205ENST00000505073 DDX4Q9NQI0 724 aaKnown RBP15.22■□□□□ 0.03
CCSER1-205ENST00000505073 PAXBP1Q9Y5B6 917 aa15.22■□□□□ 0.03
CCSER1-205ENST00000505073 USP17L3A6NCW0 530 aa15.22■□□□□ 0.03
CCSER1-205ENST00000505073 USP17L4A6NCW7 530 aa15.22■□□□□ 0.03
CCSER1-205ENST00000505073 KIF28PB7ZC32 967 aa15.22■□□□□ 0.03
CCSER1-205ENST00000505073 TNNT1P13805 278 aa15.22■□□□□ 0.03
CCSER1-205ENST00000505073 ZNF75DP51815 510 aa15.22■□□□□ 0.03
CCSER1-205ENST00000505073 CAMK4Q16566 473 aa15.22■□□□□ 0.03
CCSER1-205ENST00000505073 ANO6Q4KMQ2 910 aa15.22■□□□□ 0.03
CCSER1-205ENST00000505073 KRT40Q6A162 431 aa15.22■□□□□ 0.03
CCSER1-205ENST00000505073 USP17L1Q7RTZ2 530 aa15.22■□□□□ 0.03
CCSER1-205ENST00000505073 NBPF11Q86T75 865 aa15.22■□□□□ 0.03
CCSER1-205ENST00000505073 TEKT1Q969V4 418 aa15.22■□□□□ 0.03
CCSER1-205ENST00000505073 USP28Q96RU2 1077 aa15.22■□□□□ 0.03
CCSER1-205ENST00000505073 TNMDQ9H2S6 317 aa15.22■□□□□ 0.03
CCSER1-205ENST00000505073 IL17RBQ9NRM6 502 aa15.22■□□□□ 0.03
CCSER1-205ENST00000505073 DLEC1Q9Y238 1755 aa15.22■□□□□ 0.03
CCSER1-205ENST00000505073 CCDC196A0A1B0GTZ2 297 aa15.21■□□□□ 0.03
CCSER1-205ENST00000505073 WDHD1O75717 1129 aaPredicted RBP15.21■□□□□ 0.03
CCSER1-205ENST00000505073 RASA1P20936 1047 aa15.21■□□□□ 0.03
CCSER1-205ENST00000505073 CRKP46108 304 aa15.21■□□□□ 0.03
CCSER1-205ENST00000505073 CDK8P49336 464 aa15.21■□□□□ 0.03
CCSER1-205ENST00000505073 RCAN1P53805 252 aa15.21■□□□□ 0.03
CCSER1-205ENST00000505073 TROAPQ12815 778 aa15.21■□□□□ 0.03
CCSER1-205ENST00000505073 TAF3Q5VWG9 929 aa15.21■□□□□ 0.03
CCSER1-205ENST00000505073 RCSD1Q6JBY9 416 aa15.21■□□□□ 0.03
CCSER1-205ENST00000505073 ZNF444Q8N0Y2 327 aaPredicted RBP15.21■□□□□ 0.03
CCSER1-205ENST00000505073 CRACR2BQ8N4Y2 399 aaPredicted RBP15.21■□□□□ 0.03
CCSER1-205ENST00000505073 MYH15Q9Y2K3 1946 aa15.21■□□□□ 0.03
CCSER1-205ENST00000505073 PLEKHA8P1O95397 391 aa15.21■□□□□ 0.03
CCSER1-205ENST00000505073 KIF23Q02241 960 aaPredicted RBP15.21■□□□□ 0.03
CCSER1-205ENST00000505073 CCDC93Q567U6 631 aa15.21■□□□□ 0.03
CCSER1-205ENST00000505073 APOBEC3HQ6NTF7 200 aaKnown RBP15.21■□□□□ 0.03
CCSER1-205ENST00000505073 CDC42EP5Q6NZY7 148 aa15.21■□□□□ 0.03
CCSER1-205ENST00000505073 SUPT20HQ8NEM7 779 aa15.21■□□□□ 0.03
CCSER1-205ENST00000505073 STK36Q9NRP7 1315 aa15.21■□□□□ 0.03
CCSER1-205ENST00000505073 DDX60LQ5H9U9 1706 aaKnown RBP15.21■□□□□ 0.03
CCSER1-205ENST00000505073 YDJCA8MPS7 323 aa15.2■□□□□ 0.02
CCSER1-205ENST00000505073 TSPY3P0CV98 308 aa15.2■□□□□ 0.02
CCSER1-205ENST00000505073 TSPY8P0CW00 308 aa15.2■□□□□ 0.02
CCSER1-205ENST00000505073 HHIPL2Q6UWX4 724 aa15.2■□□□□ 0.02
CCSER1-205ENST00000505073 RBM43Q6ZSC3 357 aaKnown RBP15.2■□□□□ 0.02
CCSER1-205ENST00000505073 C16orf86Q6ZW13 317 aa15.2■□□□□ 0.02
CCSER1-205ENST00000505073 CCDC125Q86Z20 511 aa15.2■□□□□ 0.02
CCSER1-205ENST00000505073 CKAP2LQ8IYA6 745 aa15.2■□□□□ 0.02
CCSER1-205ENST00000505073 TRIM22Q8IYM9 498 aa15.2■□□□□ 0.02
CCSER1-205ENST00000505073 CCDC112Q8NEF3 446 aa15.2■□□□□ 0.02
CCSER1-205ENST00000505073 TRIM5Q9C035 493 aa15.2■□□□□ 0.02
CCSER1-205ENST00000505073 DDX19AQ9NUU7 478 aaKnown RBP15.2■□□□□ 0.02
CCSER1-205ENST00000505073 NRBP1Q9UHY1 535 aa15.2■□□□□ 0.02
CCSER1-205ENST00000505073 DDX41Q9UJV9 622 aaKnown RBP15.2■□□□□ 0.02
CCSER1-205ENST00000505073 CFAP45Q9UL16 551 aa15.2■□□□□ 0.02
CCSER1-205ENST00000505073 ZNF771Q7L3S4 317 aaPredicted RBP15.2■□□□□ 0.02
CCSER1-205ENST00000505073 DACT1Q9NYF0 836 aa15.2■□□□□ 0.02
CCSER1-205ENST00000505073 hCG_1642624A0A1W2PR95 340 aa15.2■□□□□ 0.02
CCSER1-205ENST00000505073 DDAH1O94760 285 aa15.2■□□□□ 0.02
CCSER1-205ENST00000505073 RBM5P52756 815 aaKnown RBP eCLIP15.2■□□□□ 0.02
CCSER1-205ENST00000505073 PGBD1Q96JS3 809 aa15.2■□□□□ 0.02
CCSER1-205ENST00000505073 BAZ2BQ9UIF8 2168 aaKnown RBP15.19■□□□□ 0.02
CCSER1-205ENST00000505073 FOCADQ5VW36 1801 aa15.19■□□□□ 0.02
CCSER1-205ENST00000505073 ZNF396Q96N95 335 aaPredicted RBP15.19■□□□□ 0.02
CCSER1-205ENST00000505073 CLSTN2Q9H4D0 955 aa15.19■□□□□ 0.02
CCSER1-205ENST00000505073 ZNF277Q9NRM2 450 aaPredicted RBP15.19■□□□□ 0.02
CCSER1-205ENST00000505073 CACNB3P54284 484 aa15.19■□□□□ 0.02
CCSER1-205ENST00000505073 NFIAQ12857 509 aa15.19■□□□□ 0.02
CCSER1-205ENST00000505073 TRIM29Q14134 588 aa15.19■□□□□ 0.02
CCSER1-205ENST00000505073 KAT14Q9H8E8 782 aa15.19■□□□□ 0.02
CCSER1-205ENST00000505073 KCNJ14Q9UNX9 436 aa15.19■□□□□ 0.02
CCSER1-205ENST00000505073 ZNF646O15015 1829 aaPredicted RBP15.18■□□□□ 0.02
CCSER1-205ENST00000505073 GOLGA6L4A6NEF3 574 aa15.18■□□□□ 0.02
CCSER1-205ENST00000505073 CALM1P0DP23 149 aa15.18■□□□□ 0.02
CCSER1-205ENST00000505073 CALM2P0DP24 149 aa15.18■□□□□ 0.02
CCSER1-205ENST00000505073 CALM3P0DP25 149 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 381.2 ms