RNA–Protein interactions for RNA: ENST00000504782.5

RNF4-206, Transcript of ring finger protein 4, humanhuman

TSL 2

Gene RNF4, Length 614 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-206ENST00000504782 TSHZ3Q63HK5 1081 aa15.48■□□□□ 0.07
RNF4-206ENST00000504782 TMED8Q6PL24 325 aaPredicted RBP15.48■□□□□ 0.07
RNF4-206ENST00000504782 PORCNQ9H237 461 aa15.48■□□□□ 0.07
RNF4-206ENST00000504782 CHMP4BQ9H444 224 aaKnown RBP15.48■□□□□ 0.07
RNF4-206ENST00000504782 A0A1W2PRG0 241 aa15.47■□□□□ 0.07
RNF4-206ENST00000504782 CNMDO75829 334 aa15.47■□□□□ 0.07
RNF4-206ENST00000504782 SGPL1O95470 568 aa15.47■□□□□ 0.07
RNF4-206ENST00000504782 DEFB118Q96PH6 123 aa15.47■□□□□ 0.07
RNF4-206ENST00000504782 PAGR1Q9BTK6 254 aa15.47■□□□□ 0.07
RNF4-206ENST00000504782 RLFQ13129 1914 aa15.47■□□□□ 0.07
RNF4-206ENST00000504782 ALPK3Q96L96 1907 aa15.47■□□□□ 0.07
RNF4-206ENST00000504782 CYP2B6P20813 491 aa15.46■□□□□ 0.07
RNF4-206ENST00000504782 KIAA1755Q5JYT7 1200 aa15.46■□□□□ 0.07
RNF4-206ENST00000504782 CLEC10AQ8IUN9 316 aa15.46■□□□□ 0.07
RNF4-206ENST00000504782 GPRC5AQ8NFJ5 357 aa15.46■□□□□ 0.07
RNF4-206ENST00000504782 C12orf42Q96LP6 360 aa15.46■□□□□ 0.07
RNF4-206ENST00000504782 FEZ1Q99689 392 aa15.46■□□□□ 0.07
RNF4-206ENST00000504782 PUS7LQ9H0K6 701 aaKnown RBP15.46■□□□□ 0.07
RNF4-206ENST00000504782 DCTPP1Q9H773 170 aa15.46■□□□□ 0.07
RNF4-206ENST00000504782 PCDHB15Q9Y5E8 787 aa15.46■□□□□ 0.07
RNF4-206ENST00000504782 H0YGN5 161 aa15.45■□□□□ 0.06
RNF4-206ENST00000504782 MPHOSPH10O00566 681 aaKnown RBP15.45■□□□□ 0.06
RNF4-206ENST00000504782 VCAM1P19320 739 aa15.45■□□□□ 0.06
RNF4-206ENST00000504782 ERVK-9P63128 1117 aa15.45■□□□□ 0.06
RNF4-206ENST00000504782 ERVK-24P63145 666 aa15.45■□□□□ 0.06
RNF4-206ENST00000504782 CATSPERGQ6ZRH7 1159 aa15.45■□□□□ 0.06
RNF4-206ENST00000504782 SIAH1Q8IUQ4 282 aa15.45■□□□□ 0.06
RNF4-206ENST00000504782 NKX2-3Q8TAU0 364 aa15.45■□□□□ 0.06
RNF4-206ENST00000504782 TRIB2Q92519 343 aa15.45■□□□□ 0.06
RNF4-206ENST00000504782 KIAA1683Q9H0B3 1180 aa15.45■□□□□ 0.06
RNF4-206ENST00000504782 CABP5Q9NP86 173 aa15.45■□□□□ 0.06
RNF4-206ENST00000504782 PAK6Q9NQU5 681 aaPredicted RBP15.45■□□□□ 0.06
RNF4-206ENST00000504782 USP17L15C9J2P7 530 aa15.44■□□□□ 0.06
RNF4-206ENST00000504782 USP17L13C9JLJ4 530 aa15.44■□□□□ 0.06
RNF4-206ENST00000504782 USP17L11C9JVI0 530 aa15.44■□□□□ 0.06
RNF4-206ENST00000504782 USP17L18D6R9N7 530 aa15.44■□□□□ 0.06
RNF4-206ENST00000504782 USP17L22D6RA61 530 aa15.44■□□□□ 0.06
RNF4-206ENST00000504782 USP17L17D6RBQ6 530 aa15.44■□□□□ 0.06
RNF4-206ENST00000504782 USP17L19D6RCP7 530 aa15.44■□□□□ 0.06
RNF4-206ENST00000504782 USP17L20D6RJB6 530 aa15.44■□□□□ 0.06
RNF4-206ENST00000504782 TFRCP02786 760 aaKnown RBP15.44■□□□□ 0.06
RNF4-206ENST00000504782 AKR1B1P15121 316 aa15.44■□□□□ 0.06
RNF4-206ENST00000504782 USP17L24Q0WX57 530 aa15.44■□□□□ 0.06
RNF4-206ENST00000504782 UBE3CQ15386 1083 aa15.44■□□□□ 0.06
RNF4-206ENST00000504782 HABP4Q5JVS0 413 aaKnown RBP15.44■□□□□ 0.06
RNF4-206ENST00000504782 BTBD7Q9P203 1132 aa15.44■□□□□ 0.06
RNF4-206ENST00000504782 PARP14Q460N5 1801 aa15.43■□□□□ 0.06
RNF4-206ENST00000504782 USP17L12C9JPN9 530 aa15.43■□□□□ 0.06
RNF4-206ENST00000504782 USP17L21D6R901 530 aa15.43■□□□□ 0.06
RNF4-206ENST00000504782 FARP2O94887 1054 aaPredicted RBP15.43■□□□□ 0.06
RNF4-206ENST00000504782 HMGCRP04035 888 aa15.43■□□□□ 0.06
RNF4-206ENST00000504782 CCL14Q16627 93 aa15.43■□□□□ 0.06
RNF4-206ENST00000504782 C12orf60Q5U649 245 aa15.43■□□□□ 0.06
RNF4-206ENST00000504782 GPR142Q7Z601 462 aa15.43■□□□□ 0.06
RNF4-206ENST00000504782 DIS3LQ8TF46 1054 aaKnown RBP15.43■□□□□ 0.06
RNF4-206ENST00000504782 USP6NLQ92738 828 aa15.43■□□□□ 0.06
RNF4-206ENST00000504782 DPF3Q92784 378 aa15.43■□□□□ 0.06
RNF4-206ENST00000504782 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.43■□□□□ 0.06
RNF4-206ENST00000504782 CRISPLD2Q9H0B8 497 aa15.43■□□□□ 0.06
RNF4-206ENST00000504782 XRN2Q9H0D6 950 aaKnown RBP eCLIP15.43■□□□□ 0.06
RNF4-206ENST00000504782 RPAP3Q9H6T3 665 aaPredicted RBP15.43■□□□□ 0.06
RNF4-206ENST00000504782 ECHDC1Q9NTX5 307 aa15.43■□□□□ 0.06
RNF4-206ENST00000504782 COLQQ9Y215 455 aaPredicted RBP15.43■□□□□ 0.06
RNF4-206ENST00000504782 SLC4A4Q9Y6R1 1079 aa15.43■□□□□ 0.06
RNF4-206ENST00000504782 SPDYE16A6NNV3 312 aaPredicted RBP15.42■□□□□ 0.06
RNF4-206ENST00000504782 CDK8P49336 464 aa15.42■□□□□ 0.06
RNF4-206ENST00000504782 USP14P54578 494 aa15.42■□□□□ 0.06
RNF4-206ENST00000504782 MORN1Q5T089 497 aa15.42■□□□□ 0.06
RNF4-206ENST00000504782 CTR9Q6PD62 1173 aa15.42■□□□□ 0.06
RNF4-206ENST00000504782 OTUD7AQ8TE49 926 aaPredicted RBP15.42■□□□□ 0.06
RNF4-206ENST00000504782 NUDT12Q9BQG2 462 aa15.42■□□□□ 0.06
RNF4-206ENST00000504782 ATP8A2Q9NTI2 1148 aa15.42■□□□□ 0.06
RNF4-206ENST00000504782 PCDH10Q9P2E7 1040 aa15.42■□□□□ 0.06
RNF4-206ENST00000504782 COL11A1P12107 1806 aaPredicted RBP15.41■□□□□ 0.06
RNF4-206ENST00000504782 A0A0G2JMZ2 1700 aa15.41■□□□□ 0.06
RNF4-206ENST00000504782 MAPK4P31152 587 aa15.41■□□□□ 0.06
RNF4-206ENST00000504782 PLEKHH3Q7Z736 793 aa15.41■□□□□ 0.06
RNF4-206ENST00000504782 OSBP2Q969R2 916 aa15.41■□□□□ 0.06
RNF4-206ENST00000504782 RABGAP1Q9Y3P9 1069 aa15.41■□□□□ 0.06
RNF4-206ENST00000504782 RPTORQ8N122 1335 aa15.41■□□□□ 0.06
RNF4-206ENST00000504782 MNX1P50219 401 aaPredicted RBP15.4■□□□□ 0.06
RNF4-206ENST00000504782 TMEM179Q6ZVK1 233 aa15.4■□□□□ 0.06
RNF4-206ENST00000504782 STK11IPQ8N1F8 1099 aa15.4■□□□□ 0.06
RNF4-206ENST00000504782 GCC1Q96CN9 775 aa15.4■□□□□ 0.06
RNF4-206ENST00000504782 PAWRQ96IZ0 340 aaKnown RBP15.4■□□□□ 0.06
RNF4-206ENST00000504782 STRBPQ96SI9 672 aaKnown RBP15.4■□□□□ 0.06
RNF4-206ENST00000504782 FLRT1Q9NZU1 646 aa15.4■□□□□ 0.06
RNF4-206ENST00000504782 SWAP70Q9UH65 585 aa15.4■□□□□ 0.06
RNF4-206ENST00000504782 GREB1LQ9C091 1923 aaPredicted RBP15.4■□□□□ 0.06
RNF4-206ENST00000504782 FRMPD3Q5JV73 1810 aa15.4■□□□□ 0.06
RNF4-206ENST00000504782 GSG1L2A8MUP6 293 aa15.39■□□□□ 0.05
RNF4-206ENST00000504782 PRKAR2AP13861 404 aaKnown RBP15.39■□□□□ 0.05
RNF4-206ENST00000504782 CACNB2Q08289 660 aaPredicted RBP15.39■□□□□ 0.05
RNF4-206ENST00000504782 MAP3K21Q5TCX8 1036 aa15.39■□□□□ 0.05
RNF4-206ENST00000504782 LBX2Q6XYB7 198 aa15.39■□□□□ 0.05
RNF4-206ENST00000504782 C16orf86Q6ZW13 317 aa15.39■□□□□ 0.05
RNF4-206ENST00000504782 SPICE1Q8N0Z3 855 aa15.39■□□□□ 0.05
RNF4-206ENST00000504782 KBTBD3Q8NAB2 608 aa15.39■□□□□ 0.05
RNF4-206ENST00000504782 GTF3C2Q8WUA4 911 aaPredicted RBP15.39■□□□□ 0.05
RNF4-206ENST00000504782 HMX1Q9NP08 348 aaPredicted RBP15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms