RNA–Protein interactions for RNA: ENST00000504687.5

LMNA-220, Transcript of lamin A/C, humanhuman

TSL 4

Gene LMNA, Length 546 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-220ENST00000504687 NFKBIEO00221 500 aa15.42■□□□□ 0.06
LMNA-220ENST00000504687 PSMD14O00487 310 aa15.42■□□□□ 0.06
LMNA-220ENST00000504687 DTNBO60941 627 aa15.42■□□□□ 0.06
LMNA-220ENST00000504687 TOP1P11387 765 aaKnown RBP15.42■□□□□ 0.06
LMNA-220ENST00000504687 KIF23Q02241 960 aaPredicted RBP15.42■□□□□ 0.06
LMNA-220ENST00000504687 GRM4Q14833 912 aa15.42■□□□□ 0.06
LMNA-220ENST00000504687 CFAP100Q494V2 611 aa15.42■□□□□ 0.06
LMNA-220ENST00000504687 SLC44A5Q8NCS7 719 aa15.42■□□□□ 0.06
LMNA-220ENST00000504687 PNMA1Q8ND90 353 aa15.42■□□□□ 0.06
LMNA-220ENST00000504687 NUP133Q8WUM0 1156 aa15.42■□□□□ 0.06
LMNA-220ENST00000504687 PHKBQ93100 1093 aa15.42■□□□□ 0.06
LMNA-220ENST00000504687 ZBED3Q96IU2 234 aaPredicted RBP15.42■□□□□ 0.06
LMNA-220ENST00000504687 CHAMP1Q96JM3 812 aa15.42■□□□□ 0.06
LMNA-220ENST00000504687 SYT17Q9BSW7 474 aa15.42■□□□□ 0.06
LMNA-220ENST00000504687 SLC26A6Q9BXS9 759 aa15.42■□□□□ 0.06
LMNA-220ENST00000504687 DICER1Q9UPY3 1922 aaKnown RBP15.41■□□□□ 0.06
LMNA-220ENST00000504687 SPDYE2BA6NHP3 402 aa15.41■□□□□ 0.06
LMNA-220ENST00000504687 NMT2O60551 498 aa15.41■□□□□ 0.06
LMNA-220ENST00000504687 SPDYE6P0CI01 402 aa15.41■□□□□ 0.06
LMNA-220ENST00000504687 RPS12P25398 132 aaKnown RBP15.41■□□□□ 0.06
LMNA-220ENST00000504687 ZNF445P59923 1031 aa15.41■□□□□ 0.06
LMNA-220ENST00000504687 NFIAQ12857 509 aa15.41■□□□□ 0.06
LMNA-220ENST00000504687 PICALMQ13492 652 aa15.41■□□□□ 0.06
LMNA-220ENST00000504687 TRIM29Q14134 588 aa15.41■□□□□ 0.06
LMNA-220ENST00000504687 TNIP1Q15025 636 aa15.41■□□□□ 0.06
LMNA-220ENST00000504687 KRT40Q6A162 431 aa15.41■□□□□ 0.06
LMNA-220ENST00000504687 CCDC144CPQ8IYA2 1237 aa15.41■□□□□ 0.06
LMNA-220ENST00000504687 OGFOD1Q8N543 542 aa15.41■□□□□ 0.06
LMNA-220ENST00000504687 NLGN2Q8NFZ4 835 aa15.41■□□□□ 0.06
LMNA-220ENST00000504687 LEO1Q8WVC0 666 aaPredicted RBP15.41■□□□□ 0.06
LMNA-220ENST00000504687 SYAP1Q96A49 352 aaPredicted RBP15.41■□□□□ 0.06
LMNA-220ENST00000504687 TMEM47Q9BQJ4 181 aa15.41■□□□□ 0.06
LMNA-220ENST00000504687 GNL3Q9BVP2 549 aaKnown RBP eCLIP15.41■□□□□ 0.06
LMNA-220ENST00000504687 CNTNAP5Q8WYK1 1306 aa15.41■□□□□ 0.06
LMNA-220ENST00000504687 PALM3A6NDB9 673 aaPredicted RBP15.4■□□□□ 0.06
LMNA-220ENST00000504687 XBP1P17861 261 aa15.4■□□□□ 0.06
LMNA-220ENST00000504687 SHMT1P34896 483 aa15.4■□□□□ 0.06
LMNA-220ENST00000504687 CXCL9Q07325 125 aa15.4■□□□□ 0.06
LMNA-220ENST00000504687 PKN1Q16512 942 aa15.4■□□□□ 0.06
LMNA-220ENST00000504687 CIAPIN1Q6FI81 312 aa15.4■□□□□ 0.06
LMNA-220ENST00000504687 TATDN1Q6P1N9 297 aa15.4■□□□□ 0.06
LMNA-220ENST00000504687 JDP2Q8WYK2 163 aa15.4■□□□□ 0.06
LMNA-220ENST00000504687 PRMT6Q96LA8 375 aaPredicted RBP15.4■□□□□ 0.06
LMNA-220ENST00000504687 FOXP1Q9H334 677 aaPredicted RBP15.4■□□□□ 0.06
LMNA-220ENST00000504687 POLR3EQ9NVU0 708 aa15.4■□□□□ 0.06
LMNA-220ENST00000504687 MTMR4Q9NYA4 1195 aa15.4■□□□□ 0.06
LMNA-220ENST00000504687 RTEL1Q9NZ71 1219 aa15.4■□□□□ 0.06
LMNA-220ENST00000504687 MORC2Q9Y6X9 1032 aaPredicted RBP15.4■□□□□ 0.06
LMNA-220ENST00000504687 FSD2A1L4K1 749 aa15.39■□□□□ 0.05
LMNA-220ENST00000504687 FIBPO43427 364 aa15.39■□□□□ 0.05
LMNA-220ENST00000504687 YEATS4O95619 227 aa15.39■□□□□ 0.05
LMNA-220ENST00000504687 MMP1P03956 469 aa15.39■□□□□ 0.05
LMNA-220ENST00000504687 NASPP49321 788 aaPredicted RBP15.39■□□□□ 0.05
LMNA-220ENST00000504687 RBM5P52756 815 aaKnown RBP eCLIP15.39■□□□□ 0.05
LMNA-220ENST00000504687 AKAP17AQ02040 695 aaKnown RBP15.39■□□□□ 0.05
LMNA-220ENST00000504687 SPDYE2Q495Y8 402 aa15.39■□□□□ 0.05
LMNA-220ENST00000504687 MYSM1Q5VVJ2 828 aa15.39■□□□□ 0.05
LMNA-220ENST00000504687 FAM83AQ86UY5 434 aa15.39■□□□□ 0.05
LMNA-220ENST00000504687 SPATA32Q96LK8 384 aa15.39■□□□□ 0.05
LMNA-220ENST00000504687 GDPD2Q9HCC8 539 aa15.39■□□□□ 0.05
LMNA-220ENST00000504687 SH3GLB2Q9NR46 395 aa15.39■□□□□ 0.05
LMNA-220ENST00000504687 SYNPO2Q9UMS6 1093 aa15.39■□□□□ 0.05
LMNA-220ENST00000504687 GADD45BO75293 160 aaPredicted RBP15.38■□□□□ 0.05
LMNA-220ENST00000504687 RAD17O75943 681 aa15.38■□□□□ 0.05
LMNA-220ENST00000504687 SNHG28P0DPA3 235 aa15.38■□□□□ 0.05
LMNA-220ENST00000504687 ZNF280AP59817 542 aaPredicted RBP15.38■□□□□ 0.05
LMNA-220ENST00000504687 DLGAP5Q15398 846 aa15.38■□□□□ 0.05
LMNA-220ENST00000504687 SAFBQ15424 915 aaKnown RBP eCLIP15.38■□□□□ 0.05
LMNA-220ENST00000504687 FAM173BQ6P4H8 233 aa15.38■□□□□ 0.05
LMNA-220ENST00000504687 SH3BP5LQ7L8J4 393 aa15.38■□□□□ 0.05
LMNA-220ENST00000504687 SRBD1Q8N5C6 995 aaKnown RBP15.38■□□□□ 0.05
LMNA-220ENST00000504687 FAM151AQ8WW52 585 aa15.38■□□□□ 0.05
LMNA-220ENST00000504687 DPF2Q92785 391 aa15.38■□□□□ 0.05
LMNA-220ENST00000504687 CEP95Q96GE4 821 aa15.38■□□□□ 0.05
LMNA-220ENST00000504687 SPZ1Q9BXG8 430 aa15.38■□□□□ 0.05
LMNA-220ENST00000504687 TMOD2Q9NZR1 351 aa15.38■□□□□ 0.05
LMNA-220ENST00000504687 MAD2L2Q9UI95 211 aa15.38■□□□□ 0.05
LMNA-220ENST00000504687 HERC5Q9UII4 1024 aaKnown RBP15.38■□□□□ 0.05
LMNA-220ENST00000504687 MYH4Q9Y623 1939 aa15.37■□□□□ 0.05
LMNA-220ENST00000504687 FZD9O00144 591 aa15.37■□□□□ 0.05
LMNA-220ENST00000504687 LETM1O95202 739 aaPredicted RBP15.37■□□□□ 0.05
LMNA-220ENST00000504687 PLEKHA8P1O95397 391 aa15.37■□□□□ 0.05
LMNA-220ENST00000504687 GUCY1A2P33402 732 aa15.37■□□□□ 0.05
LMNA-220ENST00000504687 GUCY1B3Q02153 619 aa15.37■□□□□ 0.05
LMNA-220ENST00000504687 PFKFB3Q16875 520 aaPredicted RBP15.37■□□□□ 0.05
LMNA-220ENST00000504687 SLC4A8Q2Y0W8 1093 aa15.37■□□□□ 0.05
LMNA-220ENST00000504687 FOXD4L6Q3SYB3 417 aaPredicted RBP15.37■□□□□ 0.05
LMNA-220ENST00000504687 FOXD4L3Q6VB84 417 aaPredicted RBP15.37■□□□□ 0.05
LMNA-220ENST00000504687 MKL1Q969V6 931 aa15.37■□□□□ 0.05
LMNA-220ENST00000504687 AIFM3Q96NN9 605 aa15.37■□□□□ 0.05
LMNA-220ENST00000504687 PHF20Q9BVI0 1012 aa15.37■□□□□ 0.05
LMNA-220ENST00000504687 TDRD3Q9H7E2 651 aaKnown RBP15.37■□□□□ 0.05
LMNA-220ENST00000504687 DNAJC18Q9H819 358 aa15.37■□□□□ 0.05
LMNA-220ENST00000504687 PCDHAC2Q9Y5I4 1007 aa15.37■□□□□ 0.05
LMNA-220ENST00000504687 DDTLA6NHG4 134 aaPredicted RBP15.36■□□□□ 0.05
LMNA-220ENST00000504687 KIF28PB7ZC32 967 aa15.36■□□□□ 0.05
LMNA-220ENST00000504687 TBC1D12O60347 775 aa15.36■□□□□ 0.05
LMNA-220ENST00000504687 TTLL1O95922 423 aa15.36■□□□□ 0.05
LMNA-220ENST00000504687 AKR1B1P15121 316 aa15.36■□□□□ 0.05
LMNA-220ENST00000504687 OTUD7BQ6GQQ9 843 aa15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms