RNA–Protein interactions for RNA: ENST00000504289.1

COL1A1-210, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 481 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-210ENST00000504289 ANO6Q4KMQ2 910 aa11.28□□□□□ -0.6
COL1A1-210ENST00000504289 RCSD1Q6JBY9 416 aa11.28□□□□□ -0.6
COL1A1-210ENST00000504289 KANK3Q6NY19 840 aa11.28□□□□□ -0.6
COL1A1-210ENST00000504289 SARM1Q6SZW1 724 aa11.28□□□□□ -0.6
COL1A1-210ENST00000504289 HHIPL2Q6UWX4 724 aa11.28□□□□□ -0.6
COL1A1-210ENST00000504289 PODNQ7Z5L7 613 aa11.28□□□□□ -0.6
COL1A1-210ENST00000504289 CKAP2LQ8IYA6 745 aa11.28□□□□□ -0.6
COL1A1-210ENST00000504289 TEX11Q8IYF3 940 aa11.28□□□□□ -0.6
COL1A1-210ENST00000504289 CEP57L1Q8IYX8 460 aa11.28□□□□□ -0.6
COL1A1-210ENST00000504289 NEDD1Q8NHV4 660 aa11.28□□□□□ -0.6
COL1A1-210ENST00000504289 CBX8Q9HC52 389 aa11.28□□□□□ -0.6
COL1A1-210ENST00000504289 KIAA1468Q9P260 1216 aa11.28□□□□□ -0.6
COL1A1-210ENST00000504289 MYH6P13533 1939 aa11.28□□□□□ -0.6
COL1A1-210ENST00000504289 NAV1Q8NEY1 1877 aa11.27□□□□□ -0.6
COL1A1-210ENST00000504289 QSER1Q2KHR3 1735 aa11.27□□□□□ -0.61
COL1A1-210ENST00000504289 BTBD18B2RXH4 712 aa11.27□□□□□ -0.61
COL1A1-210ENST00000504289 MYO1BO43795 1136 aa11.27□□□□□ -0.61
COL1A1-210ENST00000504289 PPFIA3O75145 1194 aa11.27□□□□□ -0.61
COL1A1-210ENST00000504289 PRDM1O75626 825 aa11.27□□□□□ -0.61
COL1A1-210ENST00000504289 PTMAP06454 111 aaKnown RBP11.27□□□□□ -0.61
COL1A1-210ENST00000504289 USP17L8P0C7I0 530 aa11.27□□□□□ -0.61
COL1A1-210ENST00000504289 TSPY3P0CV98 308 aa11.27□□□□□ -0.61
COL1A1-210ENST00000504289 TSPY8P0CW00 308 aa11.27□□□□□ -0.61
COL1A1-210ENST00000504289 CDC25BP30305 580 aa11.27□□□□□ -0.61
COL1A1-210ENST00000504289 GUCY1A2P33402 732 aa11.27□□□□□ -0.61
COL1A1-210ENST00000504289 NDUFA8P51970 172 aa11.27□□□□□ -0.61
COL1A1-210ENST00000504289 RHBDL3P58872 404 aa11.27□□□□□ -0.61
COL1A1-210ENST00000504289 GRM4Q14833 912 aa11.27□□□□□ -0.61
COL1A1-210ENST00000504289 DIXDC1Q155Q3 683 aa11.27□□□□□ -0.61
COL1A1-210ENST00000504289 PFKFB3Q16875 520 aaPredicted RBP11.27□□□□□ -0.61
COL1A1-210ENST00000504289 DPP8Q6V1X1 898 aaPredicted RBP11.27□□□□□ -0.61
COL1A1-210ENST00000504289 FERMT2Q96AC1 680 aa11.27□□□□□ -0.61
COL1A1-210ENST00000504289 PYM1Q9BRP8 204 aaKnown RBP11.27□□□□□ -0.61
COL1A1-210ENST00000504289 RRAGDQ9NQL2 400 aaPredicted RBP11.27□□□□□ -0.61
COL1A1-210ENST00000504289 GJB4Q9NTQ9 266 aa11.27□□□□□ -0.61
COL1A1-210ENST00000504289 FAM13BQ9NYF5 915 aa11.27□□□□□ -0.61
COL1A1-210ENST00000504289 SRPRBQ9Y5M8 271 aaKnown RBP11.27□□□□□ -0.61
COL1A1-210ENST00000504289 V9GY48 417 aaPredicted RBP11.27□□□□□ -0.61
COL1A1-210ENST00000504289 CNTNAP5Q8WYK1 1306 aa11.27□□□□□ -0.61
COL1A1-210ENST00000504289 PLIN4Q96Q06 1357 aa11.27□□□□□ -0.61
COL1A1-210ENST00000504289 DDX60LQ5H9U9 1706 aaKnown RBP11.26□□□□□ -0.61
COL1A1-210ENST00000504289 A0A1B0GVL5 298 aa11.26□□□□□ -0.61
COL1A1-210ENST00000504289 TRIM75PA6NK02 468 aa11.26□□□□□ -0.61
COL1A1-210ENST00000504289 GOLGA6L19H0YKK7 550 aa11.26□□□□□ -0.61
COL1A1-210ENST00000504289 NPM3O75607 178 aaKnown RBP11.26□□□□□ -0.61
COL1A1-210ENST00000504289 MMP10P09238 476 aa11.26□□□□□ -0.61
COL1A1-210ENST00000504289 CYP2D6P10635 497 aa11.26□□□□□ -0.61
COL1A1-210ENST00000504289 SCG2P13521 617 aa11.26□□□□□ -0.61
COL1A1-210ENST00000504289 PFKFB1P16118 471 aa11.26□□□□□ -0.61
COL1A1-210ENST00000504289 SYKP43405 635 aa11.26□□□□□ -0.61
COL1A1-210ENST00000504289 IQCB1Q15051 598 aa11.26□□□□□ -0.61
COL1A1-210ENST00000504289 CT47A1Q5JQC4 288 aaPredicted RBP11.26□□□□□ -0.61
COL1A1-210ENST00000504289 PNMA1Q8ND90 353 aa11.26□□□□□ -0.61
COL1A1-210ENST00000504289 TGFBRAP1Q8WUH2 860 aa11.26□□□□□ -0.61
COL1A1-210ENST00000504289 CNKSR1Q969H4 720 aa11.26□□□□□ -0.61
COL1A1-210ENST00000504289 SWAP70Q9UH65 585 aa11.26□□□□□ -0.61
COL1A1-210ENST00000504289 TUBE1Q9UJT0 475 aa11.26□□□□□ -0.61
COL1A1-210ENST00000504289 H0YIN7 160 aa11.25□□□□□ -0.61
COL1A1-210ENST00000504289 hCG_1984214I3L0E3 225 aa11.25□□□□□ -0.61
COL1A1-210ENST00000504289 WDHD1O75717 1129 aaPredicted RBP11.25□□□□□ -0.61
COL1A1-210ENST00000504289 RASA1P20936 1047 aa11.25□□□□□ -0.61
COL1A1-210ENST00000504289 CDK8P49336 464 aa11.25□□□□□ -0.61
COL1A1-210ENST00000504289 TOB1P50616 345 aaPredicted RBP11.25□□□□□ -0.61
COL1A1-210ENST00000504289 TPRNQ4KMQ1 711 aa11.25□□□□□ -0.61
COL1A1-210ENST00000504289 FAM47AQ5JRC9 791 aa11.25□□□□□ -0.61
COL1A1-210ENST00000504289 SRBD1Q8N5C6 995 aaKnown RBP11.25□□□□□ -0.61
COL1A1-210ENST00000504289 ZNF713Q8N859 430 aaPredicted RBP11.25□□□□□ -0.61
COL1A1-210ENST00000504289 DAGLBQ8NCG7 672 aa11.25□□□□□ -0.61
COL1A1-210ENST00000504289 CCDC148Q8NFR7 591 aa11.25□□□□□ -0.61
COL1A1-210ENST00000504289 CCDC12Q8WUD4 166 aaPredicted RBP11.25□□□□□ -0.61
COL1A1-210ENST00000504289 TNFRSF25Q93038 417 aa11.25□□□□□ -0.61
COL1A1-210ENST00000504289 SPZ1Q9BXG8 430 aa11.25□□□□□ -0.61
COL1A1-210ENST00000504289 IL17RBQ9NRM6 502 aa11.25□□□□□ -0.61
COL1A1-210ENST00000504289 DAGLAQ9Y4D2 1042 aa11.25□□□□□ -0.61
COL1A1-210ENST00000504289 FLT1P17948 1338 aa11.25□□□□□ -0.61
COL1A1-210ENST00000504289 FOCADQ5VW36 1801 aa11.25□□□□□ -0.61
COL1A1-210ENST00000504289 TNS1Q9HBL0 1735 aaKnown RBP11.24□□□□□ -0.61
COL1A1-210ENST00000504289 CDK5RAP2Q96SN8 1893 aa11.24□□□□□ -0.61
COL1A1-210ENST00000504289 EP400Q96L91 3159 aa11.24□□□□□ -0.61
COL1A1-210ENST00000504289 PALM3A6NDB9 673 aaPredicted RBP11.24□□□□□ -0.61
COL1A1-210ENST00000504289 SMTNL1A8MU46 457 aa11.24□□□□□ -0.61
COL1A1-210ENST00000504289 BECN2A8MW95 431 aa11.24□□□□□ -0.61
COL1A1-210ENST00000504289 IKBKBO14920 756 aa11.24□□□□□ -0.61
COL1A1-210ENST00000504289 PLEKHA8P1O95397 391 aa11.24□□□□□ -0.61
COL1A1-210ENST00000504289 TOP1P11387 765 aaKnown RBP11.24□□□□□ -0.61
COL1A1-210ENST00000504289 NLRP12P59046 1061 aa11.24□□□□□ -0.61
COL1A1-210ENST00000504289 TPM4P67936 248 aa11.24□□□□□ -0.61
COL1A1-210ENST00000504289 GTF2IP78347 998 aa11.24□□□□□ -0.61
COL1A1-210ENST00000504289 KIAA2012Q0VF49 1180 aa11.24□□□□□ -0.61
COL1A1-210ENST00000504289 GRIK5Q16478 980 aa11.24□□□□□ -0.61
COL1A1-210ENST00000504289 STRIP1Q5VSL9 837 aa11.24□□□□□ -0.61
COL1A1-210ENST00000504289 SHC4Q6S5L8 630 aa11.24□□□□□ -0.61
COL1A1-210ENST00000504289 MAPKAPK5Q8IW41 473 aa11.24□□□□□ -0.61
COL1A1-210ENST00000504289 STK11IPQ8N1F8 1099 aa11.24□□□□□ -0.61
COL1A1-210ENST00000504289 SUPT20HQ8NEM7 779 aa11.24□□□□□ -0.61
COL1A1-210ENST00000504289 MRFAP1L1Q96HT8 127 aa11.24□□□□□ -0.61
COL1A1-210ENST00000504289 DNAJC25Q9H1X3 360 aa11.24□□□□□ -0.61
COL1A1-210ENST00000504289 FBXO2Q9UK22 296 aaPredicted RBP11.24□□□□□ -0.61
COL1A1-210ENST00000504289 KCNH3Q9ULD8 1083 aa11.24□□□□□ -0.61
COL1A1-210ENST00000504289 KCNJ14Q9UNX9 436 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms