RNA–Protein interactions for RNA: ENST00000503742.5

UBE2D3-216, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 1 (best)

Gene UBE2D3, Length 1,977 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-216ENST00000503742 KAT14Q9H8E8 782 aa24.65■■□□□ 1.54
UBE2D3-216ENST00000503742 TTF2Q9UNY4 1162 aaKnown RBP24.65■■□□□ 1.54
UBE2D3-216ENST00000503742 V9GY48 417 aaPredicted RBP24.65■■□□□ 1.54
UBE2D3-216ENST00000503742 SNED1Q8TER0 1413 aa24.65■■□□□ 1.54
UBE2D3-216ENST00000503742 CHRNA5P30532 468 aa24.65■■□□□ 1.54
UBE2D3-216ENST00000503742 CNKSR1Q969H4 720 aa24.65■■□□□ 1.54
UBE2D3-216ENST00000503742 MXD3Q9BW11 206 aa24.65■■□□□ 1.54
UBE2D3-216ENST00000503742 USP17L3A6NCW0 530 aa24.64■■□□□ 1.54
UBE2D3-216ENST00000503742 USP17L4A6NCW7 530 aa24.64■■□□□ 1.54
UBE2D3-216ENST00000503742 USP17L1Q7RTZ2 530 aa24.64■■□□□ 1.54
UBE2D3-216ENST00000503742 C7orf43Q8WVR3 580 aa24.64■■□□□ 1.54
UBE2D3-216ENST00000503742 EIF4ENIF1Q9NRA8 985 aaKnown RBP24.64■■□□□ 1.54
UBE2D3-216ENST00000503742 F8W031 263 aaPredicted RBP24.63■■□□□ 1.53
UBE2D3-216ENST00000503742 KINO60870 393 aaKnown RBP24.63■■□□□ 1.53
UBE2D3-216ENST00000503742 WDHD1O75717 1129 aaPredicted RBP24.63■■□□□ 1.53
UBE2D3-216ENST00000503742 XBP1P17861 261 aa24.63■■□□□ 1.53
UBE2D3-216ENST00000503742 TOB1P50616 345 aaPredicted RBP24.63■■□□□ 1.53
UBE2D3-216ENST00000503742 PNMA1Q8ND90 353 aa24.63■■□□□ 1.53
UBE2D3-216ENST00000503742 TRIM44Q96DX7 344 aaPredicted RBP24.63■■□□□ 1.53
UBE2D3-216ENST00000503742 PHF20Q9BVI0 1012 aa24.63■■□□□ 1.53
UBE2D3-216ENST00000503742 A0A1B0GVL5 298 aa24.63■■□□□ 1.53
UBE2D3-216ENST00000503742 G3V3G9 751 aa24.63■■□□□ 1.53
UBE2D3-216ENST00000503742 CMA1P23946 247 aa24.63■■□□□ 1.53
UBE2D3-216ENST00000503742 KIF5BP33176 963 aa24.63■■□□□ 1.53
UBE2D3-216ENST00000503742 DCAF8Q5TAQ9 597 aa24.63■■□□□ 1.53
UBE2D3-216ENST00000503742 HHIPL2Q6UWX4 724 aa24.63■■□□□ 1.53
UBE2D3-216ENST00000503742 VPS54Q9P1Q0 977 aa24.63■■□□□ 1.53
UBE2D3-216ENST00000503742 ZNF646O15015 1829 aaPredicted RBP24.63■■□□□ 1.53
UBE2D3-216ENST00000503742 NDUFA8P51970 172 aa24.62■■□□□ 1.53
UBE2D3-216ENST00000503742 NR5A1Q13285 461 aa24.62■■□□□ 1.53
UBE2D3-216ENST00000503742 OXER1Q8TDS5 423 aa24.62■■□□□ 1.53
UBE2D3-216ENST00000503742 DBNDD1Q9H9R9 158 aa24.62■■□□□ 1.53
UBE2D3-216ENST00000503742 hCG_1642624A0A1W2PR95 340 aa24.62■■□□□ 1.53
UBE2D3-216ENST00000503742 MARCKSP29966 332 aaPredicted RBP24.62■■□□□ 1.53
UBE2D3-216ENST00000503742 RILPL1Q5EBL4 403 aa24.62■■□□□ 1.53
UBE2D3-216ENST00000503742 JMYQ8N9B5 988 aa24.62■■□□□ 1.53
UBE2D3-216ENST00000503742 NEDD1Q8NHV4 660 aa24.62■■□□□ 1.53
UBE2D3-216ENST00000503742 ADAMTSL1Q8N6G6 1762 aa24.61■■□□□ 1.53
UBE2D3-216ENST00000503742 FKBP1AP62942 108 aaKnown RBP24.61■■□□□ 1.53
UBE2D3-216ENST00000503742 GRM4Q14833 912 aa24.61■■□□□ 1.53
UBE2D3-216ENST00000503742 FAM200AQ8TCP9 573 aa24.61■■□□□ 1.53
UBE2D3-216ENST00000503742 SCN9AQ15858 1988 aa24.61■■□□□ 1.53
UBE2D3-216ENST00000503742 SASS6Q6UVJ0 657 aa24.6■■□□□ 1.53
UBE2D3-216ENST00000503742 KCNQ5Q9NR82 932 aa24.6■■□□□ 1.53
UBE2D3-216ENST00000503742 STRIP1Q5VSL9 837 aa24.6■■□□□ 1.53
UBE2D3-216ENST00000503742 TMEM47Q9BQJ4 181 aa24.6■■□□□ 1.53
UBE2D3-216ENST00000503742 DDX4Q9NQI0 724 aaKnown RBP24.6■■□□□ 1.53
UBE2D3-216ENST00000503742 FAM237AA0A1B0GTK4 181 aa24.59■■□□□ 1.53
UBE2D3-216ENST00000503742 NOVP48745 357 aa24.59■■□□□ 1.53
UBE2D3-216ENST00000503742 SCNN1DP51172 638 aa24.59■■□□□ 1.53
UBE2D3-216ENST00000503742 GABPAQ06546 454 aa24.59■■□□□ 1.53
UBE2D3-216ENST00000503742 NPY5RQ15761 445 aa24.59■■□□□ 1.53
UBE2D3-216ENST00000503742 APOBEC3HQ6NTF7 200 aaKnown RBP24.59■■□□□ 1.53
UBE2D3-216ENST00000503742 TEKT1Q969V4 418 aa24.59■■□□□ 1.53
UBE2D3-216ENST00000503742 MRIQ9BWK5 157 aa24.59■■□□□ 1.53
UBE2D3-216ENST00000503742 KRT2P35908 639 aa24.58■■□□□ 1.53
UBE2D3-216ENST00000503742 PFKFB3Q16875 520 aaPredicted RBP24.58■■□□□ 1.53
UBE2D3-216ENST00000503742 ANO6Q4KMQ2 910 aa24.58■■□□□ 1.53
UBE2D3-216ENST00000503742 USP40Q9NVE5 1235 aa24.58■■□□□ 1.53
UBE2D3-216ENST00000503742 MAD2L2Q9UI95 211 aa24.58■■□□□ 1.53
UBE2D3-216ENST00000503742 BAZ2BQ9UIF8 2168 aaKnown RBP24.58■■□□□ 1.53
UBE2D3-216ENST00000503742 ECE2O60344 883 aa24.58■■□□□ 1.52
UBE2D3-216ENST00000503742 SCG2P13521 617 aa24.58■■□□□ 1.52
UBE2D3-216ENST00000503742 HS1BP3Q53T59 392 aa24.58■■□□□ 1.52
UBE2D3-216ENST00000503742 DACT2Q5SW24 774 aa24.58■■□□□ 1.52
UBE2D3-216ENST00000503742 CC2D2BQ6DHV5 1058 aa24.58■■□□□ 1.52
UBE2D3-216ENST00000503742 CDC42EP5Q6NZY7 148 aa24.58■■□□□ 1.52
UBE2D3-216ENST00000503742 PDGFDQ9GZP0 370 aaPredicted RBP24.58■■□□□ 1.52
UBE2D3-216ENST00000503742 HPSEQ9Y251 543 aa24.58■■□□□ 1.52
UBE2D3-216ENST00000503742 C10orf71Q711Q0 1435 aa24.57■■□□□ 1.52
UBE2D3-216ENST00000503742 CUTAO60888 179 aa24.57■■□□□ 1.52
UBE2D3-216ENST00000503742 PFKFB1P16118 471 aa24.57■■□□□ 1.52
UBE2D3-216ENST00000503742 GNAQP50148 359 aa24.57■■□□□ 1.52
UBE2D3-216ENST00000503742 PICALMQ13492 652 aa24.57■■□□□ 1.52
UBE2D3-216ENST00000503742 SHC4Q6S5L8 630 aa24.57■■□□□ 1.52
UBE2D3-216ENST00000503742 STAG2Q8N3U4 1231 aa24.57■■□□□ 1.52
UBE2D3-216ENST00000503742 ZNF219Q9P2Y4 722 aaPredicted RBP24.57■■□□□ 1.52
UBE2D3-216ENST00000503742 USP25Q9UHP3 1055 aa24.57■■□□□ 1.52
UBE2D3-216ENST00000503742 STX8Q9UNK0 236 aa24.57■■□□□ 1.52
UBE2D3-216ENST00000503742 CRKP46108 304 aa24.56■■□□□ 1.52
UBE2D3-216ENST00000503742 BAG6P46379 1132 aa24.56■■□□□ 1.52
UBE2D3-216ENST00000503742 TNFRSF25Q93038 417 aa24.56■■□□□ 1.52
UBE2D3-216ENST00000503742 PLIN4Q96Q06 1357 aa24.56■■□□□ 1.52
UBE2D3-216ENST00000503742 ZNF202O95125 648 aa24.56■■□□□ 1.52
UBE2D3-216ENST00000503742 RESP18Q5W5W9 173 aa24.56■■□□□ 1.52
UBE2D3-216ENST00000503742 ZDHHC15Q96MV8 337 aa24.56■■□□□ 1.52
UBE2D3-216ENST00000503742 CABP5Q9NP86 173 aa24.56■■□□□ 1.52
UBE2D3-216ENST00000503742 MORC2Q9Y6X9 1032 aaPredicted RBP24.56■■□□□ 1.52
UBE2D3-216ENST00000503742 PALM3A6NDB9 673 aaPredicted RBP24.55■■□□□ 1.52
UBE2D3-216ENST00000503742 CAVIN2O95810 425 aa24.55■■□□□ 1.52
UBE2D3-216ENST00000503742 CBX8Q9HC52 389 aa24.55■■□□□ 1.52
UBE2D3-216ENST00000503742 RRAGDQ9NQL2 400 aaPredicted RBP24.55■■□□□ 1.52
UBE2D3-216ENST00000503742 PCDHB6Q9Y5E3 794 aa24.55■■□□□ 1.52
UBE2D3-216ENST00000503742 VEGFAP15692 232 aaPredicted RBP24.54■■□□□ 1.52
UBE2D3-216ENST00000503742 HDLBPQ00341 1268 aaKnown RBP24.54■■□□□ 1.52
UBE2D3-216ENST00000503742 KIAA2012Q0VF49 1180 aa24.54■■□□□ 1.52
UBE2D3-216ENST00000503742 KRI1Q8N9T8 703 aaKnown RBP24.54■■□□□ 1.52
UBE2D3-216ENST00000503742 TIGD1Q96MW7 591 aa24.54■■□□□ 1.52
UBE2D3-216ENST00000503742 OSBPL5Q9H0X9 879 aaPredicted RBP24.54■■□□□ 1.52
UBE2D3-216ENST00000503742 BRMS1Q9HCU9 246 aa24.54■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 162.7 ms