RNA–Protein interactions for RNA: ENST00000502820.1

HTT-202, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 287 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-202ENST00000502820 CCDC174Q6PII3 467 aa6.28□□□□□ -1.4
HTT-202ENST00000502820 SLC4A10Q6U841 1118 aa6.28□□□□□ -1.4
HTT-202ENST00000502820 SH3BP5LQ7L8J4 393 aa6.28□□□□□ -1.4
HTT-202ENST00000502820 DZIP1Q86YF9 867 aaKnown RBP6.28□□□□□ -1.4
HTT-202ENST00000502820 TRMT2AQ8IZ69 625 aaKnown RBP6.28□□□□□ -1.4
HTT-202ENST00000502820 WDR66Q8TBY9 1149 aa6.28□□□□□ -1.4
HTT-202ENST00000502820 FBXL18Q96ME1 805 aa6.28□□□□□ -1.4
HTT-202ENST00000502820 PPP1R12CQ9BZL4 782 aa6.28□□□□□ -1.4
HTT-202ENST00000502820 RBPJLQ9UBG7 517 aa6.28□□□□□ -1.4
HTT-202ENST00000502820 MORF4L1Q9UBU8 362 aa6.28□□□□□ -1.4
HTT-202ENST00000502820 ABCF2Q9UG63 623 aa6.28□□□□□ -1.4
HTT-202ENST00000502820 RPAP1Q9BWH6 1393 aaPredicted RBP6.28□□□□□ -1.4
HTT-202ENST00000502820 UTYO14607 1347 aa6.27□□□□□ -1.41
HTT-202ENST00000502820 MROH5Q6ZUA9 1318 aa6.27□□□□□ -1.41
HTT-202ENST00000502820 ZBBXA8MT70 800 aa6.27□□□□□ -1.41
HTT-202ENST00000502820 GRM8O00222 908 aa6.27□□□□□ -1.41
HTT-202ENST00000502820 ALDH1L1O75891 902 aa6.27□□□□□ -1.41
HTT-202ENST00000502820 PGK1P00558 417 aa6.27□□□□□ -1.41
HTT-202ENST00000502820 MYOGP15173 224 aa6.27□□□□□ -1.41
HTT-202ENST00000502820 CSF2RAP15509 400 aa6.27□□□□□ -1.41
HTT-202ENST00000502820 CCNA1P78396 465 aa6.27□□□□□ -1.41
HTT-202ENST00000502820 LRRC41Q15345 812 aa6.27□□□□□ -1.41
HTT-202ENST00000502820 RAB30Q15771 203 aa6.27□□□□□ -1.41
HTT-202ENST00000502820 FAM47AQ5JRC9 791 aa6.27□□□□□ -1.41
HTT-202ENST00000502820 MORN1Q5T089 497 aa6.27□□□□□ -1.41
HTT-202ENST00000502820 KRT40Q6A162 431 aa6.27□□□□□ -1.41
HTT-202ENST00000502820 ZNF365Q70YC5 407 aa6.27□□□□□ -1.41
HTT-202ENST00000502820 OTOP2Q7RTS6 562 aa6.27□□□□□ -1.41
HTT-202ENST00000502820 MRPL50Q8N5N7 158 aaKnown RBP6.27□□□□□ -1.41
HTT-202ENST00000502820 TRPV1Q8NER1 839 aa6.27□□□□□ -1.41
HTT-202ENST00000502820 NPLOC4Q8TAT6 608 aa6.27□□□□□ -1.41
HTT-202ENST00000502820 KLHDC4Q8TBB5 520 aa6.27□□□□□ -1.41
HTT-202ENST00000502820 KAZALD1Q96I82 304 aa6.27□□□□□ -1.41
HTT-202ENST00000502820 MRIQ9BWK5 157 aa6.27□□□□□ -1.41
HTT-202ENST00000502820 ZMYND15Q9H091 742 aa6.27□□□□□ -1.41
HTT-202ENST00000502820 C11orf16Q9NQ32 467 aa6.27□□□□□ -1.41
HTT-202ENST00000502820 SUGT1Q9Y2Z0 365 aa6.27□□□□□ -1.41
HTT-202ENST00000502820 FSD2A1L4K1 749 aa6.26□□□□□ -1.41
HTT-202ENST00000502820 GOLGA6L3A6NEY3 463 aa6.26□□□□□ -1.41
HTT-202ENST00000502820 PRR33A8MZF0 331 aa6.26□□□□□ -1.41
HTT-202ENST00000502820 ENTPD3O75355 529 aa6.26□□□□□ -1.41
HTT-202ENST00000502820 GDF11O95390 407 aa6.26□□□□□ -1.41
HTT-202ENST00000502820 PTPREP23469 700 aa6.26□□□□□ -1.41
HTT-202ENST00000502820 BTDP43251 543 aa6.26□□□□□ -1.41
HTT-202ENST00000502820 BACE1P56817 501 aa6.26□□□□□ -1.41
HTT-202ENST00000502820 PLS1Q14651 629 aa6.26□□□□□ -1.41
HTT-202ENST00000502820 EP400NLQ6ZTU2 488 aa6.26□□□□□ -1.41
HTT-202ENST00000502820 RNF180Q86T96 592 aa6.26□□□□□ -1.41
HTT-202ENST00000502820 TMEM199Q8N511 208 aa6.26□□□□□ -1.41
HTT-202ENST00000502820 SSH1Q8WYL5 1049 aa6.26□□□□□ -1.41
HTT-202ENST00000502820 HERVK_113Q902F9 699 aa6.26□□□□□ -1.41
HTT-202ENST00000502820 HLA-CQ95604 372 aa6.26□□□□□ -1.41
HTT-202ENST00000502820 PHOX2BQ99453 314 aa6.26□□□□□ -1.41
HTT-202ENST00000502820 FEZ1Q99689 392 aa6.26□□□□□ -1.41
HTT-202ENST00000502820 SRCIN1Q9C0H9 1055 aa6.26□□□□□ -1.41
HTT-202ENST00000502820 UPF2Q9HAU5 1272 aaKnown RBP6.26□□□□□ -1.41
HTT-202ENST00000502820 XPNPEP3Q9NQH7 507 aa6.26□□□□□ -1.41
HTT-202ENST00000502820 DDX4Q9NQI0 724 aaKnown RBP6.26□□□□□ -1.41
HTT-202ENST00000502820 YBX2Q9Y2T7 364 aaKnown RBP6.26□□□□□ -1.41
HTT-202ENST00000502820 LAMB1P07942 1786 aa6.26□□□□□ -1.41
HTT-202ENST00000502820 PTPRCP08575 1304 aa6.25□□□□□ -1.41
HTT-202ENST00000502820 DDX11L8A8MPP1 907 aa6.25□□□□□ -1.41
HTT-202ENST00000502820 PI4K2BG5E9Z4 385 aa6.25□□□□□ -1.41
HTT-202ENST00000502820 ERC2O15083 957 aa6.25□□□□□ -1.41
HTT-202ENST00000502820 TLL1O43897 1013 aa6.25□□□□□ -1.41
HTT-202ENST00000502820 PDE8BO95263 885 aa6.25□□□□□ -1.41
HTT-202ENST00000502820 TIMP1P01033 207 aa6.25□□□□□ -1.41
HTT-202ENST00000502820 RARBP10826 455 aa6.25□□□□□ -1.41
HTT-202ENST00000502820 SLC5A1P13866 664 aa6.25□□□□□ -1.41
HTT-202ENST00000502820 CAP2P40123 477 aa6.25□□□□□ -1.41
HTT-202ENST00000502820 FAAP100Q0VG06 881 aa6.25□□□□□ -1.41
HTT-202ENST00000502820 PPIGQ13427 754 aaKnown RBP eCLIP6.25□□□□□ -1.41
HTT-202ENST00000502820 ALDH1L2Q3SY69 923 aa6.25□□□□□ -1.41
HTT-202ENST00000502820 RABL6Q3YEC7 729 aaPredicted RBP6.25□□□□□ -1.41
HTT-202ENST00000502820 TMEM240Q5SV17 173 aa6.25□□□□□ -1.41
HTT-202ENST00000502820 CRACR2BQ8N4Y2 399 aaPredicted RBP6.25□□□□□ -1.41
HTT-202ENST00000502820 ARNTL2Q8WYA1 636 aa6.25□□□□□ -1.41
HTT-202ENST00000502820 ANKS1AQ92625 1134 aa6.25□□□□□ -1.41
HTT-202ENST00000502820 USP6NLQ92738 828 aa6.25□□□□□ -1.41
HTT-202ENST00000502820 CDCA7LQ96GN5 454 aa6.25□□□□□ -1.41
HTT-202ENST00000502820 SUCLG2Q96I99 432 aa6.25□□□□□ -1.41
HTT-202ENST00000502820 OSBPL5Q9H0X9 879 aaPredicted RBP6.25□□□□□ -1.41
HTT-202ENST00000502820 MTIF3Q9H2K0 278 aaKnown RBP6.25□□□□□ -1.41
HTT-202ENST00000502820 CD320Q9NPF0 282 aa6.25□□□□□ -1.41
HTT-202ENST00000502820 STARD7Q9NQZ5 370 aa6.25□□□□□ -1.41
HTT-202ENST00000502820 GNL3LQ9NVN8 582 aaKnown RBP6.25□□□□□ -1.41
HTT-202ENST00000502820 TTC28Q96AY4 2481 aa6.24□□□□□ -1.41
HTT-202ENST00000502820 A0A1W2PQ45 241 aaPredicted RBP6.24□□□□□ -1.41
HTT-202ENST00000502820 A0A1W2PQY0 241 aa6.24□□□□□ -1.41
HTT-202ENST00000502820 SLC15A5A6NIM6 579 aa6.24□□□□□ -1.41
HTT-202ENST00000502820 USP17L10C9JJH3 530 aa6.24□□□□□ -1.41
HTT-202ENST00000502820 KIAA0355O15063 1070 aa6.24□□□□□ -1.41
HTT-202ENST00000502820 SEPT4O43236 478 aa6.24□□□□□ -1.41
HTT-202ENST00000502820 FGBP02675 491 aa6.24□□□□□ -1.41
HTT-202ENST00000502820 CT47B1P0C2W7 299 aaPredicted RBP6.24□□□□□ -1.41
HTT-202ENST00000502820 NBPF7P0C2Y1 421 aaPredicted RBP6.24□□□□□ -1.41
HTT-202ENST00000502820 CYBAP13498 195 aa6.24□□□□□ -1.41
HTT-202ENST00000502820 ADORA2AP29274 412 aa6.24□□□□□ -1.41
HTT-202ENST00000502820 CCL23P55773 120 aa6.24□□□□□ -1.41
HTT-202ENST00000502820 RRP1BQ14684 758 aaKnown RBP6.24□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms