RNA–Protein interactions for RNA: ENST00000502527.2

VCAN-204, Transcript of versican, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VCAN, Length 2,087 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-204ENST00000502527 VPS72Q15906 364 aa18.95■□□□□ 0.62
VCAN-204ENST00000502527 SBK1Q52WX2 424 aa18.95■□□□□ 0.62
VCAN-204ENST00000502527 SMIM5Q71RC9 77 aa18.95■□□□□ 0.62
VCAN-204ENST00000502527 CTCFLQ8NI51 663 aaPredicted RBP18.95■□□□□ 0.62
VCAN-204ENST00000502527 TAF1P21675 1872 aa18.95■□□□□ 0.62
VCAN-204ENST00000502527 ZBTB22O15209 634 aa18.94■□□□□ 0.62
VCAN-204ENST00000502527 E4F1Q66K89 784 aaPredicted RBP18.94■□□□□ 0.62
VCAN-204ENST00000502527 SPTY2D1Q68D10 685 aaPredicted RBP18.94■□□□□ 0.62
VCAN-204ENST00000502527 KIF18AQ8NI77 898 aa18.94■□□□□ 0.62
VCAN-204ENST00000502527 DPF2Q92785 391 aa18.94■□□□□ 0.62
VCAN-204ENST00000502527 hCG_1642624A0A1W2PR95 340 aa18.94■□□□□ 0.62
VCAN-204ENST00000502527 GNPATO15228 680 aa18.94■□□□□ 0.62
VCAN-204ENST00000502527 PRR29P0C7W0 189 aa18.94■□□□□ 0.62
VCAN-204ENST00000502527 VSTM4Q8IW00 320 aa18.94■□□□□ 0.62
VCAN-204ENST00000502527 PDCL2Q8N4E4 241 aa18.94■□□□□ 0.62
VCAN-204ENST00000502527 FERMT2Q96AC1 680 aa18.94■□□□□ 0.62
VCAN-204ENST00000502527 PRDX5P30044 214 aa18.93■□□□□ 0.62
VCAN-204ENST00000502527 PDILTQ8N807 584 aa18.93■□□□□ 0.62
VCAN-204ENST00000502527 ENOX1Q8TC92 643 aaKnown RBP18.93■□□□□ 0.62
VCAN-204ENST00000502527 FAM205CA6NFA0 338 aa18.93■□□□□ 0.62
VCAN-204ENST00000502527 CCP110O43303 1012 aa18.93■□□□□ 0.62
VCAN-204ENST00000502527 TUBB4AP04350 444 aa18.93■□□□□ 0.62
VCAN-204ENST00000502527 TOP1P11387 765 aaKnown RBP18.93■□□□□ 0.62
VCAN-204ENST00000502527 SPATA20Q8TB22 786 aa18.93■□□□□ 0.62
VCAN-204ENST00000502527 RTCBQ9Y3I0 505 aaKnown RBP18.93■□□□□ 0.62
VCAN-204ENST00000502527 CNTNAP5Q8WYK1 1306 aa18.92■□□□□ 0.62
VCAN-204ENST00000502527 IGSF3O75054 1194 aa18.92■□□□□ 0.62
VCAN-204ENST00000502527 NT5C2P49902 561 aa18.92■□□□□ 0.62
VCAN-204ENST00000502527 NCBP1Q09161 790 aaKnown RBP18.92■□□□□ 0.62
VCAN-204ENST00000502527 EARS2Q5JPH6 523 aaKnown RBP18.92■□□□□ 0.62
VCAN-204ENST00000502527 USP49Q70CQ1 688 aa18.92■□□□□ 0.62
VCAN-204ENST00000502527 NGLY1Q96IV0 654 aa18.92■□□□□ 0.62
VCAN-204ENST00000502527 PPP1R13BQ96KQ4 1090 aa18.92■□□□□ 0.62
VCAN-204ENST00000502527 BAZ2AQ9UIF9 1905 aaKnown RBP18.92■□□□□ 0.62
VCAN-204ENST00000502527 PIP4K2BP78356 416 aa18.91■□□□□ 0.62
VCAN-204ENST00000502527 CT47A1Q5JQC4 288 aaPredicted RBP18.91■□□□□ 0.62
VCAN-204ENST00000502527 FAM47AQ5JRC9 791 aa18.91■□□□□ 0.62
VCAN-204ENST00000502527 PTF1AQ7RTS3 328 aa18.91■□□□□ 0.62
VCAN-204ENST00000502527 DZIP1Q86YF9 867 aaKnown RBP18.91■□□□□ 0.62
VCAN-204ENST00000502527 GRAMD1CQ8IYS0 662 aa18.91■□□□□ 0.62
VCAN-204ENST00000502527 SRBD1Q8N5C6 995 aaKnown RBP18.91■□□□□ 0.62
VCAN-204ENST00000502527 TNFRSF25Q93038 417 aa18.91■□□□□ 0.62
VCAN-204ENST00000502527 CASZ1Q86V15 1759 aa18.91■□□□□ 0.62
VCAN-204ENST00000502527 MYH2Q9UKX2 1941 aa18.91■□□□□ 0.62
VCAN-204ENST00000502527 SLFN14P0C7P3 912 aa18.91■□□□□ 0.62
VCAN-204ENST00000502527 ERCC5P28715 1186 aaPredicted RBP18.91■□□□□ 0.62
VCAN-204ENST00000502527 TM4SF1P30408 202 aa18.91■□□□□ 0.62
VCAN-204ENST00000502527 DHX58Q96C10 678 aa18.91■□□□□ 0.62
VCAN-204ENST00000502527 NFE2L3Q9Y4A8 694 aa18.91■□□□□ 0.62
VCAN-204ENST00000502527 DLEC1Q9Y238 1755 aa18.9■□□□□ 0.62
VCAN-204ENST00000502527 TSPY2A6NKD2 308 aa18.9■□□□□ 0.62
VCAN-204ENST00000502527 NMT2O60551 498 aa18.9■□□□□ 0.62
VCAN-204ENST00000502527 TOM1O60784 492 aa18.9■□□□□ 0.62
VCAN-204ENST00000502527 CYP2D6P10635 497 aa18.9■□□□□ 0.62
VCAN-204ENST00000502527 SCG2P13521 617 aa18.9■□□□□ 0.62
VCAN-204ENST00000502527 ZNF18P17022 549 aa18.9■□□□□ 0.62
VCAN-204ENST00000502527 CDK11BP21127 795 aaKnown RBP18.9■□□□□ 0.62
VCAN-204ENST00000502527 KIF5BP33176 963 aa18.9■□□□□ 0.62
VCAN-204ENST00000502527 NPY5RQ15761 445 aa18.9■□□□□ 0.62
VCAN-204ENST00000502527 TTC38Q5R3I4 469 aa18.9■□□□□ 0.62
VCAN-204ENST00000502527 C8orf37Q96NL8 207 aa18.9■□□□□ 0.62
VCAN-204ENST00000502527 TMX1Q9H3N1 280 aa18.9■□□□□ 0.62
VCAN-204ENST00000502527 CCNL1Q9UK58 526 aaPredicted RBP18.9■□□□□ 0.62
VCAN-204ENST00000502527 COL24A1Q17RW2 1714 aa18.9■□□□□ 0.62
VCAN-204ENST00000502527 MYH6P13533 1939 aa18.9■□□□□ 0.62
VCAN-204ENST00000502527 TRAPPC10P48553 1259 aa18.89■□□□□ 0.62
VCAN-204ENST00000502527 PLCD1P51178 756 aa18.89■□□□□ 0.62
VCAN-204ENST00000502527 EVX2Q03828 476 aa18.89■□□□□ 0.62
VCAN-204ENST00000502527 FMR1Q06787 632 aaKnown RBP eCLIP18.89■□□□□ 0.62
VCAN-204ENST00000502527 CCDC24Q8N4L8 307 aa18.89■□□□□ 0.62
VCAN-204ENST00000502527 EPSTI1Q96J88 318 aa18.89■□□□□ 0.62
VCAN-204ENST00000502527 ARID3AQ99856 593 aa18.89■□□□□ 0.62
VCAN-204ENST00000502527 TMEM232C9JQI7 657 aa18.89■□□□□ 0.61
VCAN-204ENST00000502527 NPHP1O15259 732 aa18.89■□□□□ 0.61
VCAN-204ENST00000502527 ZNF174Q15697 407 aa18.89■□□□□ 0.61
VCAN-204ENST00000502527 ZNF827Q17R98 1081 aa18.89■□□□□ 0.61
VCAN-204ENST00000502527 PPP4R3BQ5MIZ7 849 aa18.89■□□□□ 0.61
VCAN-204ENST00000502527 TXNRD3Q86VQ6 643 aa18.89■□□□□ 0.61
VCAN-204ENST00000502527 SYMPKQ92797 1274 aaKnown RBP18.89■□□□□ 0.61
VCAN-204ENST00000502527 ARHGEF1Q92888 912 aaKnown RBP18.89■□□□□ 0.61
VCAN-204ENST00000502527 MCM9Q9NXL9 1143 aa18.89■□□□□ 0.61
VCAN-204ENST00000502527 IRS2Q9Y4H2 1338 aa18.89■□□□□ 0.61
VCAN-204ENST00000502527 NLRP5P59047 1200 aa18.88■□□□□ 0.61
VCAN-204ENST00000502527 PFKFB3Q16875 520 aaPredicted RBP18.88■□□□□ 0.61
VCAN-204ENST00000502527 SH3RF1Q7Z6J0 888 aa18.88■□□□□ 0.61
VCAN-204ENST00000502527 WDR66Q8TBY9 1149 aa18.88■□□□□ 0.61
VCAN-204ENST00000502527 PAGE5Q96GU1 130 aa18.88■□□□□ 0.61
VCAN-204ENST00000502527 INTS13Q9NVM9 706 aa18.88■□□□□ 0.61
VCAN-204ENST00000502527 A0A087X0B3 334 aa18.88■□□□□ 0.61
VCAN-204ENST00000502527 ATP2C1P98194 919 aaPredicted RBP18.88■□□□□ 0.61
VCAN-204ENST00000502527 MAST2Q6P0Q8 1798 aa18.87■□□□□ 0.61
VCAN-204ENST00000502527 LDHBP07195 334 aaKnown RBP18.87■□□□□ 0.61
VCAN-204ENST00000502527 FCHSD1Q86WN1 690 aa18.87■□□□□ 0.61
VCAN-204ENST00000502527 DGKHQ86XP1 1220 aa18.87■□□□□ 0.61
VCAN-204ENST00000502527 KAT14Q9H8E8 782 aa18.87■□□□□ 0.61
VCAN-204ENST00000502527 ANKIB1Q9P2G1 1089 aa18.87■□□□□ 0.61
VCAN-204ENST00000502527 LEMD3Q9Y2U8 911 aa18.87■□□□□ 0.61
VCAN-204ENST00000502527 USP17L8P0C7I0 530 aa18.86■□□□□ 0.61
VCAN-204ENST00000502527 CALML3P27482 149 aa18.86■□□□□ 0.61
VCAN-204ENST00000502527 USP5P45974 858 aa18.86■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms