RNA–Protein interactions for RNA: ENST00000502443.1

USP46-203, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 2

Gene USP46, Length 572 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-203ENST00000502443 CHMLP26374 656 aa8.69□□□□□ -1.02
USP46-203ENST00000502443 GUCY1A2P33402 732 aa8.69□□□□□ -1.02
USP46-203ENST00000502443 CTDSPL2Q05D32 466 aa8.69□□□□□ -1.02
USP46-203ENST00000502443 PDE4BQ07343 736 aa8.69□□□□□ -1.02
USP46-203ENST00000502443 DGKZQ13574 1117 aa8.69□□□□□ -1.02
USP46-203ENST00000502443 ZYXQ15942 572 aaKnown RBP8.69□□□□□ -1.02
USP46-203ENST00000502443 SH3D19Q5HYK7 790 aa8.69□□□□□ -1.02
USP46-203ENST00000502443 TREML2Q5T2D2 321 aa8.69□□□□□ -1.02
USP46-203ENST00000502443 ZNF444Q8N0Y2 327 aaPredicted RBP8.69□□□□□ -1.02
USP46-203ENST00000502443 PROCA1Q8NCQ7 364 aaPredicted RBP8.69□□□□□ -1.02
USP46-203ENST00000502443 ACER1Q8TDN7 264 aa8.69□□□□□ -1.02
USP46-203ENST00000502443 ZNF296Q8WUU4 475 aaPredicted RBP8.69□□□□□ -1.02
USP46-203ENST00000502443 RUFY2Q8WXA3 655 aa8.69□□□□□ -1.02
USP46-203ENST00000502443 PARK7Q99497 189 aaKnown RBP8.69□□□□□ -1.02
USP46-203ENST00000502443 AGTPBP1Q9UPW5 1226 aa8.69□□□□□ -1.02
USP46-203ENST00000502443 TLR2O60603 784 aa8.68□□□□□ -1.02
USP46-203ENST00000502443 ATP2B2Q01814 1243 aa8.68□□□□□ -1.02
USP46-203ENST00000502443 ICA1Q05084 483 aa8.68□□□□□ -1.02
USP46-203ENST00000502443 PABPC4Q13310 644 aaKnown RBP eCLIP8.68□□□□□ -1.02
USP46-203ENST00000502443 NOM1Q5C9Z4 860 aaKnown RBP8.68□□□□□ -1.02
USP46-203ENST00000502443 USP17L2Q6R6M4 530 aa8.68□□□□□ -1.02
USP46-203ENST00000502443 CLEC10AQ8IUN9 316 aa8.68□□□□□ -1.02
USP46-203ENST00000502443 SMCR8Q8TEV9 937 aaPredicted RBP8.68□□□□□ -1.02
USP46-203ENST00000502443 KIAA1683Q9H0B3 1180 aa8.68□□□□□ -1.02
USP46-203ENST00000502443 IL25Q9H293 177 aa8.68□□□□□ -1.02
USP46-203ENST00000502443 KANSL2Q9H9L4 492 aa8.68□□□□□ -1.02
USP46-203ENST00000502443 ARHGEF10LQ9HCE6 1279 aa8.68□□□□□ -1.02
USP46-203ENST00000502443 INCENPQ9NQS7 918 aa8.68□□□□□ -1.02
USP46-203ENST00000502443 EMILIN3Q9NT22 766 aa8.68□□□□□ -1.02
USP46-203ENST00000502443 PNMA3Q9UL41 463 aa8.68□□□□□ -1.02
USP46-203ENST00000502443 SLC45A1Q9Y2W3 748 aa8.68□□□□□ -1.02
USP46-203ENST00000502443 LOC285556D6RIA3 1793 aa8.68□□□□□ -1.02
USP46-203ENST00000502443 A0A1W2PRG0 241 aa8.67□□□□□ -1.02
USP46-203ENST00000502443 ZNF213O14771 459 aa8.67□□□□□ -1.02
USP46-203ENST00000502443 ZMYM6O95789 1325 aa8.67□□□□□ -1.02
USP46-203ENST00000502443 TSPY3P0CV98 308 aa8.67□□□□□ -1.02
USP46-203ENST00000502443 TSPY8P0CW00 308 aa8.67□□□□□ -1.02
USP46-203ENST00000502443 EEF2P13639 858 aaKnown RBP8.67□□□□□ -1.02
USP46-203ENST00000502443 OSBPP22059 807 aa8.67□□□□□ -1.02
USP46-203ENST00000502443 USP14P54578 494 aa8.67□□□□□ -1.02
USP46-203ENST00000502443 HAND2P61296 217 aa8.67□□□□□ -1.02
USP46-203ENST00000502443 IRX3P78415 501 aaPredicted RBP8.67□□□□□ -1.02
USP46-203ENST00000502443 SP3Q02447 781 aa8.67□□□□□ -1.02
USP46-203ENST00000502443 BMP2KLQ5H9B9 411 aa8.67□□□□□ -1.02
USP46-203ENST00000502443 FAM47AQ5JRC9 791 aa8.67□□□□□ -1.02
USP46-203ENST00000502443 RAD50Q92878 1312 aa8.67□□□□□ -1.02
USP46-203ENST00000502443 DSCC1Q9BVC3 393 aa8.67□□□□□ -1.02
USP46-203ENST00000502443 TOMM22Q9NS69 142 aa8.67□□□□□ -1.02
USP46-203ENST00000502443 CPA4Q9UI42 421 aa8.67□□□□□ -1.02
USP46-203ENST00000502443 ANAPC4Q9UJX5 808 aa8.67□□□□□ -1.02
USP46-203ENST00000502443 TSPY2A6NKD2 308 aa8.66□□□□□ -1.02
USP46-203ENST00000502443 SGSM2O43147 1006 aa8.66□□□□□ -1.02
USP46-203ENST00000502443 RAD21O60216 631 aa8.66□□□□□ -1.02
USP46-203ENST00000502443 RANBP6O60518 1105 aaKnown RBP8.66□□□□□ -1.02
USP46-203ENST00000502443 VCAM1P19320 739 aa8.66□□□□□ -1.02
USP46-203ENST00000502443 HOXA7P31268 230 aaPredicted RBP8.66□□□□□ -1.02
USP46-203ENST00000502443 TFAP4Q01664 338 aa8.66□□□□□ -1.02
USP46-203ENST00000502443 RRP12Q5JTH9 1297 aaKnown RBP8.66□□□□□ -1.02
USP46-203ENST00000502443 C17orf99Q6UX52 265 aa8.66□□□□□ -1.02
USP46-203ENST00000502443 MFSD6Q6ZSS7 791 aa8.66□□□□□ -1.02
USP46-203ENST00000502443 SIAH1Q8IUQ4 282 aa8.66□□□□□ -1.02
USP46-203ENST00000502443 TNS4Q8IZW8 715 aa8.66□□□□□ -1.02
USP46-203ENST00000502443 SPICE1Q8N0Z3 855 aa8.66□□□□□ -1.02
USP46-203ENST00000502443 CD99L2Q8TCZ2 262 aa8.66□□□□□ -1.02
USP46-203ENST00000502443 ERO1AQ96HE7 468 aa8.66□□□□□ -1.02
USP46-203ENST00000502443 C12orf42Q96LP6 360 aa8.66□□□□□ -1.02
USP46-203ENST00000502443 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.66□□□□□ -1.02
USP46-203ENST00000502443 ASCC2Q9H1I8 757 aaPredicted RBP8.66□□□□□ -1.02
USP46-203ENST00000502443 SH2D4AQ9H788 454 aa8.66□□□□□ -1.02
USP46-203ENST00000502443 CTNNA3Q9UI47 895 aa8.66□□□□□ -1.02
USP46-203ENST00000502443 DDX52Q9Y2R4 599 aaKnown RBP eCLIP8.66□□□□□ -1.02
USP46-203ENST00000502443 GREB1LQ9C091 1923 aaPredicted RBP8.66□□□□□ -1.02
USP46-203ENST00000502443 ADGRA2Q96PE1 1338 aa8.65□□□□□ -1.02
USP46-203ENST00000502443 MYH4Q9Y623 1939 aa8.65□□□□□ -1.02
USP46-203ENST00000502443 USP17L15C9J2P7 530 aa8.65□□□□□ -1.02
USP46-203ENST00000502443 USP17L13C9JLJ4 530 aa8.65□□□□□ -1.02
USP46-203ENST00000502443 USP17L11C9JVI0 530 aa8.65□□□□□ -1.02
USP46-203ENST00000502443 USP17L18D6R9N7 530 aa8.65□□□□□ -1.02
USP46-203ENST00000502443 USP17L22D6RA61 530 aa8.65□□□□□ -1.02
USP46-203ENST00000502443 USP17L17D6RBQ6 530 aa8.65□□□□□ -1.02
USP46-203ENST00000502443 USP17L19D6RCP7 530 aa8.65□□□□□ -1.02
USP46-203ENST00000502443 USP17L20D6RJB6 530 aa8.65□□□□□ -1.02
USP46-203ENST00000502443 ORC4O43929 436 aa8.65□□□□□ -1.02
USP46-203ENST00000502443 ECM2O94769 699 aaPredicted RBP8.65□□□□□ -1.02
USP46-203ENST00000502443 FGRP09769 529 aa8.65□□□□□ -1.02
USP46-203ENST00000502443 USP17L24Q0WX57 530 aa8.65□□□□□ -1.02
USP46-203ENST00000502443 KIF22Q14807 665 aa8.65□□□□□ -1.02
USP46-203ENST00000502443 IMMTQ16891 758 aaKnown RBP8.65□□□□□ -1.02
USP46-203ENST00000502443 AKNAD1Q5T1N1 836 aa8.65□□□□□ -1.02
USP46-203ENST00000502443 KIAA1211Q6ZU35 1233 aa8.65□□□□□ -1.02
USP46-203ENST00000502443 CTU1Q7Z7A3 348 aaKnown RBP8.65□□□□□ -1.02
USP46-203ENST00000502443 ANKRD13CQ8N6S4 541 aa8.65□□□□□ -1.02
USP46-203ENST00000502443 NEDD1Q8NHV4 660 aa8.65□□□□□ -1.02
USP46-203ENST00000502443 STAG1Q8WVM7 1258 aa8.65□□□□□ -1.02
USP46-203ENST00000502443 CEP95Q96GE4 821 aa8.65□□□□□ -1.02
USP46-203ENST00000502443 NBPF3Q9H094 633 aa8.65□□□□□ -1.02
USP46-203ENST00000502443 RNF41Q9H4P4 317 aaPredicted RBP8.65□□□□□ -1.02
USP46-203ENST00000502443 RPAP3Q9H6T3 665 aaPredicted RBP8.65□□□□□ -1.02
USP46-203ENST00000502443 GOPCQ9HD26 462 aa8.65□□□□□ -1.02
USP46-203ENST00000502443 NYAP2Q9P242 653 aa8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms