RNA–Protein interactions for RNA: ENST00000498819.1

SECISBP2-208, Transcript of SECIS binding protein 2, human

TSL 5

Gene SECISBP2, Length 854 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SECISBP2-208	ENST00000498819	USP17L2	Q6R6M4	530 aa		12.05	□□□□□ -0.48
SECISBP2-208	ENST00000498819	ERICH6	Q7L0X2	663 aa		12.05	□□□□□ -0.48
SECISBP2-208	ENST00000498819	FERMT2	Q96AC1	680 aa		12.05	□□□□□ -0.48
SECISBP2-208	ENST00000498819	TSPYL2	Q9H2G4	693 aa	Predicted RBP	12.05	□□□□□ -0.48
SECISBP2-208	ENST00000498819	PRDM12	Q9H4Q4	367 aa		12.05	□□□□□ -0.48
SECISBP2-208	ENST00000498819	USP17L15	C9J2P7	530 aa		12.04	□□□□□ -0.48
SECISBP2-208	ENST00000498819	USP17L13	C9JLJ4	530 aa		12.04	□□□□□ -0.48
SECISBP2-208	ENST00000498819	USP17L11	C9JVI0	530 aa		12.04	□□□□□ -0.48
SECISBP2-208	ENST00000498819	USP17L18	D6R9N7	530 aa		12.04	□□□□□ -0.48
SECISBP2-208	ENST00000498819	USP17L22	D6RA61	530 aa		12.04	□□□□□ -0.48
SECISBP2-208	ENST00000498819	USP17L17	D6RBQ6	530 aa		12.04	□□□□□ -0.48
SECISBP2-208	ENST00000498819	USP17L19	D6RCP7	530 aa		12.04	□□□□□ -0.48
SECISBP2-208	ENST00000498819	USP17L20	D6RJB6	530 aa		12.04	□□□□□ -0.48
SECISBP2-208	ENST00000498819	MYCN	P04198	464 aa	Predicted RBP	12.04	□□□□□ -0.48
SECISBP2-208	ENST00000498819	BMP1	P13497	986 aa		12.04	□□□□□ -0.48
SECISBP2-208	ENST00000498819	GSTO1	P78417	241 aa		12.04	□□□□□ -0.48
SECISBP2-208	ENST00000498819	USP17L24	Q0WX57	530 aa		12.04	□□□□□ -0.48
SECISBP2-208	ENST00000498819	CCDC85B	Q15834	202 aa	Predicted RBP	12.04	□□□□□ -0.48
SECISBP2-208	ENST00000498819	LBX2	Q6XYB7	198 aa		12.04	□□□□□ -0.48
SECISBP2-208	ENST00000498819	WDR63	Q8IWG1	891 aa		12.04	□□□□□ -0.48
SECISBP2-208	ENST00000498819	ZNF384	Q8TF68	577 aa		12.04	□□□□□ -0.48
SECISBP2-208	ENST00000498819	C12orf42	Q96LP6	360 aa		12.04	□□□□□ -0.48
SECISBP2-208	ENST00000498819	NECAB3	Q96P71	396 aa	Predicted RBP	12.04	□□□□□ -0.48
SECISBP2-208	ENST00000498819	PBX4	Q9BYU1	374 aa		12.04	□□□□□ -0.48
SECISBP2-208	ENST00000498819	USP44	Q9H0E7	712 aa		12.04	□□□□□ -0.48
SECISBP2-208	ENST00000498819	CXXC1	Q9P0U4	656 aa	Predicted RBP	12.04	□□□□□ -0.48
SECISBP2-208	ENST00000498819	PHF24	Q9UPV7	400 aa		12.04	□□□□□ -0.48
SECISBP2-208	ENST00000498819	STRN	O43815	780 aa		12.03	□□□□□ -0.48
SECISBP2-208	ENST00000498819	ADGRE1	Q14246	886 aa		12.03	□□□□□ -0.48
SECISBP2-208	ENST00000498819	DPP9	Q86TI2	863 aa		12.03	□□□□□ -0.48
SECISBP2-208	ENST00000498819	METTL16	Q86W50	562 aa	Known RBP	12.03	□□□□□ -0.48
SECISBP2-208	ENST00000498819	FOXP4	Q8IVH2	680 aa	Predicted RBP	12.03	□□□□□ -0.48
SECISBP2-208	ENST00000498819	SIL1	Q9H173	461 aa		12.03	□□□□□ -0.48
SECISBP2-208	ENST00000498819	TMEM39A	Q9NV64	488 aa		12.03	□□□□□ -0.48
SECISBP2-208	ENST00000498819	ZBTB21	Q9ULJ3	1066 aa		12.03	□□□□□ -0.48
SECISBP2-208	ENST00000498819	XIRP2	A4UGR9	3374 aa		12.02	□□□□□ -0.49
SECISBP2-208	ENST00000498819	IGFBP4	P22692	258 aa		12.02	□□□□□ -0.49
SECISBP2-208	ENST00000498819	ADORA1	P30542	326 aa		12.02	□□□□□ -0.49
SECISBP2-208	ENST00000498819	PBX2	P40425	430 aa		12.02	□□□□□ -0.49
SECISBP2-208	ENST00000498819	AAK1	Q2M2I8	961 aa		12.02	□□□□□ -0.49
SECISBP2-208	ENST00000498819	TMEM31	Q5JXX7	168 aa		12.02	□□□□□ -0.49
SECISBP2-208	ENST00000498819	CATSPERG	Q6ZRH7	1159 aa		12.02	□□□□□ -0.49
SECISBP2-208	ENST00000498819	CCDC129	Q6ZRS4	1044 aa		12.02	□□□□□ -0.49
SECISBP2-208	ENST00000498819	TEX11	Q8IYF3	940 aa		12.02	□□□□□ -0.49
SECISBP2-208	ENST00000498819	NSUN4	Q96CB9	384 aa	Known RBP	12.02	□□□□□ -0.49
SECISBP2-208	ENST00000498819	TOX2	Q96NM4	488 aa		12.02	□□□□□ -0.49
SECISBP2-208	ENST00000498819	BUD13	Q9BRD0	619 aa	Known RBP eCLIP	12.02	□□□□□ -0.49	5e-8	■□□□□ 8.8
SECISBP2-208	ENST00000498819	EPHX3	Q9H6B9	360 aa		12.02	□□□□□ -0.49
SECISBP2-208	ENST00000498819	DNAJC18	Q9H819	358 aa		12.02	□□□□□ -0.49
SECISBP2-208	ENST00000498819	BTBD7	Q9P203	1132 aa		12.02	□□□□□ -0.49
SECISBP2-208	ENST00000498819	PQBP1	O60828	265 aa	Known RBP	12.01	□□□□□ -0.49
SECISBP2-208	ENST00000498819	GDF11	O95390	407 aa		12.01	□□□□□ -0.49
SECISBP2-208	ENST00000498819	ADORA2A	P29274	412 aa		12.01	□□□□□ -0.49
SECISBP2-208	ENST00000498819	IL15	P40933	162 aa	Predicted RBP	12.01	□□□□□ -0.49
SECISBP2-208	ENST00000498819	FAAP100	Q0VG06	881 aa		12.01	□□□□□ -0.49
SECISBP2-208	ENST00000498819	SHROOM1	Q2M3G4	852 aa	Predicted RBP	12.01	□□□□□ -0.49
SECISBP2-208	ENST00000498819	FAM47A	Q5JRC9	791 aa		12.01	□□□□□ -0.49
SECISBP2-208	ENST00000498819	RASIP1	Q5U651	963 aa		12.01	□□□□□ -0.49
SECISBP2-208	ENST00000498819	CCDC174	Q6PII3	467 aa		12.01	□□□□□ -0.49
SECISBP2-208	ENST00000498819	ANKRD33	Q7Z3H0	272 aa		12.01	□□□□□ -0.49
SECISBP2-208	ENST00000498819	CRACR2B	Q8N4Y2	399 aa	Predicted RBP	12.01	□□□□□ -0.49
SECISBP2-208	ENST00000498819	SLC44A5	Q8NCS7	719 aa		12.01	□□□□□ -0.49
SECISBP2-208	ENST00000498819	SLC5A4	Q9NY91	659 aa		12.01	□□□□□ -0.49
SECISBP2-208	ENST00000498819	GRXCR1	A8MXD5	290 aa		12	□□□□□ -0.49
SECISBP2-208	ENST00000498819	DCDC2C	A8MYV0	355 aa		12	□□□□□ -0.49
SECISBP2-208	ENST00000498819	TIMP1	P01033	207 aa		12	□□□□□ -0.49
SECISBP2-208	ENST00000498819	USP14	P54578	494 aa		12	□□□□□ -0.49
SECISBP2-208	ENST00000498819	PRAMEF19	Q5SWL8	479 aa		12	□□□□□ -0.49
SECISBP2-208	ENST00000498819	MFSD5	Q6N075	450 aa		12	□□□□□ -0.49
SECISBP2-208	ENST00000498819	RNF180	Q86T96	592 aa		12	□□□□□ -0.49
SECISBP2-208	ENST00000498819	ALYREF	Q86V81	257 aa	Known RBP	12	□□□□□ -0.49
SECISBP2-208	ENST00000498819	TRIM34	Q9BYJ4	488 aa		12	□□□□□ -0.49
SECISBP2-208	ENST00000498819		A0A1W2PQ45	241 aa	Predicted RBP	11.99	□□□□□ -0.49
SECISBP2-208	ENST00000498819		A0A1W2PQY0	241 aa		11.99	□□□□□ -0.49
SECISBP2-208	ENST00000498819	SPDYE16	A6NNV3	312 aa	Predicted RBP	11.99	□□□□□ -0.49
SECISBP2-208	ENST00000498819	GPR37L1	O60883	481 aa		11.99	□□□□□ -0.49
SECISBP2-208	ENST00000498819	RARB	P10826	455 aa		11.99	□□□□□ -0.49
SECISBP2-208	ENST00000498819	TIMM10	P62072	90 aa		11.99	□□□□□ -0.49
SECISBP2-208	ENST00000498819	PPIG	Q13427	754 aa	Known RBP eCLIP	11.99	□□□□□ -0.49	2e-6	■■□□□ 14.2
SECISBP2-208	ENST00000498819	MVP	Q14764	893 aa	Known RBP	11.99	□□□□□ -0.49
SECISBP2-208	ENST00000498819	RAB30	Q15771	203 aa		11.99	□□□□□ -0.49
SECISBP2-208	ENST00000498819	TMEM240	Q5SV17	173 aa		11.99	□□□□□ -0.49
SECISBP2-208	ENST00000498819	C16orf59	Q7L2K0	433 aa		11.99	□□□□□ -0.49
SECISBP2-208	ENST00000498819	SH3RF3	Q8TEJ3	882 aa	Predicted RBP	11.99	□□□□□ -0.49
SECISBP2-208	ENST00000498819	KIAA1683	Q9H0B3	1180 aa		11.99	□□□□□ -0.49
SECISBP2-208	ENST00000498819	XPNPEP3	Q9NQH7	507 aa		11.99	□□□□□ -0.49
SECISBP2-208	ENST00000498819	NRBP1	Q9UHY1	535 aa		11.99	□□□□□ -0.49
SECISBP2-208	ENST00000498819	MSRA	Q9UJ68	235 aa		11.99	□□□□□ -0.49
SECISBP2-208	ENST00000498819	PTPRC	P08575	1304 aa		11.98	□□□□□ -0.49
SECISBP2-208	ENST00000498819	COBL	O75128	1261 aa		11.98	□□□□□ -0.49
SECISBP2-208	ENST00000498819	BAG3	O95817	575 aa		11.98	□□□□□ -0.49
SECISBP2-208	ENST00000498819	PLCG2	P16885	1265 aa		11.98	□□□□□ -0.49
SECISBP2-208	ENST00000498819	VCAM1	P19320	739 aa		11.98	□□□□□ -0.49
SECISBP2-208	ENST00000498819	KCNQ1	P51787	676 aa		11.98	□□□□□ -0.49
SECISBP2-208	ENST00000498819	TFF2	Q03403	129 aa		11.98	□□□□□ -0.49
SECISBP2-208	ENST00000498819	ZYX	Q15942	572 aa	Known RBP	11.98	□□□□□ -0.49
SECISBP2-208	ENST00000498819	SHCBP1	Q8NEM2	672 aa		11.98	□□□□□ -0.49
SECISBP2-208	ENST00000498819	SNX27	Q96L92	541 aa		11.98	□□□□□ -0.49
SECISBP2-208	ENST00000498819	FEZ1	Q99689	392 aa		11.98	□□□□□ -0.49
SECISBP2-208	ENST00000498819	NOL10	Q9BSC4	688 aa	Known RBP	11.98	□□□□□ -0.49

Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms