RNA–Protein interactions for RNA: ENST00000498698.1

HMGCL-207, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 3

Gene HMGCL, Length 463 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-207ENST00000498698 VCAM1P19320 739 aa11.4□□□□□ -0.58
HMGCL-207ENST00000498698 USP14P54578 494 aa11.4□□□□□ -0.58
HMGCL-207ENST00000498698 UBXN2AP68543 259 aa11.4□□□□□ -0.58
HMGCL-207ENST00000498698 USP17L24Q0WX57 530 aa11.4□□□□□ -0.58
HMGCL-207ENST00000498698 Q3C1V9 767 aa11.4□□□□□ -0.58
HMGCL-207ENST00000498698 SIAH1Q8IUQ4 282 aa11.4□□□□□ -0.58
HMGCL-207ENST00000498698 OTUD7AQ8TE49 926 aaPredicted RBP11.4□□□□□ -0.58
HMGCL-207ENST00000498698 OSBP2Q969R2 916 aa11.4□□□□□ -0.58
HMGCL-207ENST00000498698 SHISA4Q96DD7 197 aa11.4□□□□□ -0.58
HMGCL-207ENST00000498698 STRBPQ96SI9 672 aaKnown RBP11.4□□□□□ -0.58
HMGCL-207ENST00000498698 RNF208Q9H0X6 261 aa11.4□□□□□ -0.58
HMGCL-207ENST00000498698 UNC93B1Q9H1C4 597 aa11.4□□□□□ -0.58
HMGCL-207ENST00000498698 SLC4A4Q9Y6R1 1079 aa11.4□□□□□ -0.58
HMGCL-207ENST00000498698 PHIPQ8WWQ0 1821 aa11.39□□□□□ -0.59
HMGCL-207ENST00000498698 MPHOSPH10O00566 681 aaKnown RBP11.39□□□□□ -0.59
HMGCL-207ENST00000498698 RNF113AO15541 343 aaKnown RBP11.39□□□□□ -0.59
HMGCL-207ENST00000498698 INHAP05111 366 aa11.39□□□□□ -0.59
HMGCL-207ENST00000498698 GJA8P48165 433 aa11.39□□□□□ -0.59
HMGCL-207ENST00000498698 CDK8P49336 464 aa11.39□□□□□ -0.59
HMGCL-207ENST00000498698 CTR9Q6PD62 1173 aa11.39□□□□□ -0.59
HMGCL-207ENST00000498698 CATSPERGQ6ZRH7 1159 aa11.39□□□□□ -0.59
HMGCL-207ENST00000498698 TMEM179Q6ZVK1 233 aa11.39□□□□□ -0.59
HMGCL-207ENST00000498698 C16orf86Q6ZW13 317 aa11.39□□□□□ -0.59
HMGCL-207ENST00000498698 NKX2-3Q8TAU0 364 aa11.39□□□□□ -0.59
HMGCL-207ENST00000498698 PI4K2BQ8TCG2 481 aa11.39□□□□□ -0.59
HMGCL-207ENST00000498698 GTF3C2Q8WUA4 911 aaPredicted RBP11.39□□□□□ -0.59
HMGCL-207ENST00000498698 APPBP2Q92624 585 aa11.39□□□□□ -0.59
HMGCL-207ENST00000498698 CCDC17Q96LX7 622 aa11.39□□□□□ -0.59
HMGCL-207ENST00000498698 YTHDC1Q96MU7 727 aaKnown RBP11.39□□□□□ -0.59
HMGCL-207ENST00000498698 ZSWIM8A7E2V4 1837 aa11.39□□□□□ -0.59
HMGCL-207ENST00000498698 TTC41PQ6P2S7 1318 aa11.38□□□□□ -0.59
HMGCL-207ENST00000498698 MYO5AQ9Y4I1 1855 aaKnown RBP11.38□□□□□ -0.59
HMGCL-207ENST00000498698 TNRC18O15417 2968 aaPredicted RBP11.38□□□□□ -0.59
HMGCL-207ENST00000498698 GSG1L2A8MUP6 293 aa11.38□□□□□ -0.59
HMGCL-207ENST00000498698 CNMDO75829 334 aa11.38□□□□□ -0.59
HMGCL-207ENST00000498698 ZFYP08048 801 aaPredicted RBP11.38□□□□□ -0.59
HMGCL-207ENST00000498698 AKR1B1P15121 316 aa11.38□□□□□ -0.59
HMGCL-207ENST00000498698 MAPK4P31152 587 aa11.38□□□□□ -0.59
HMGCL-207ENST00000498698 ERVK-9P63128 1117 aa11.38□□□□□ -0.59
HMGCL-207ENST00000498698 ERVK-24P63145 666 aa11.38□□□□□ -0.59
HMGCL-207ENST00000498698 GIMAP6Q6P9H5 292 aa11.38□□□□□ -0.59
HMGCL-207ENST00000498698 LBX2Q6XYB7 198 aa11.38□□□□□ -0.59
HMGCL-207ENST00000498698 UBE2Q1Q7Z7E8 422 aa11.38□□□□□ -0.59
HMGCL-207ENST00000498698 DDRGK1Q96HY6 314 aa11.38□□□□□ -0.59
HMGCL-207ENST00000498698 PAGR1Q9BTK6 254 aa11.38□□□□□ -0.59
HMGCL-207ENST00000498698 PORCNQ9H237 461 aa11.38□□□□□ -0.59
HMGCL-207ENST00000498698 RPAP3Q9H6T3 665 aaPredicted RBP11.38□□□□□ -0.59
HMGCL-207ENST00000498698 RABGAP1Q9Y3P9 1069 aa11.38□□□□□ -0.59
HMGCL-207ENST00000498698 SALL3Q9BXA9 1300 aa11.37□□□□□ -0.59
HMGCL-207ENST00000498698 ERC2O15083 957 aa11.37□□□□□ -0.59
HMGCL-207ENST00000498698 GLRX3O76003 335 aaKnown RBP11.37□□□□□ -0.59
HMGCL-207ENST00000498698 HDAC1Q13547 482 aaPredicted RBP11.37□□□□□ -0.59
HMGCL-207ENST00000498698 SBK1Q52WX2 424 aa11.37□□□□□ -0.59
HMGCL-207ENST00000498698 KIAA1755Q5JYT7 1200 aa11.37□□□□□ -0.59
HMGCL-207ENST00000498698 CLEC10AQ8IUN9 316 aa11.37□□□□□ -0.59
HMGCL-207ENST00000498698 AMOTL1Q8IY63 956 aa11.37□□□□□ -0.59
HMGCL-207ENST00000498698 U2AF1L4Q8WU68 220 aaKnown RBP11.37□□□□□ -0.59
HMGCL-207ENST00000498698 USP6NLQ92738 828 aa11.37□□□□□ -0.59
HMGCL-207ENST00000498698 PAK6Q9NQU5 681 aaPredicted RBP11.37□□□□□ -0.59
HMGCL-207ENST00000498698 TMX2Q9Y320 296 aa11.37□□□□□ -0.59
HMGCL-207ENST00000498698 CENPFP49454 3210 aa11.37□□□□□ -0.59
HMGCL-207ENST00000498698 LOC285556D6RIA3 1793 aa11.36□□□□□ -0.59
HMGCL-207ENST00000498698 SPDYE16A6NNV3 312 aaPredicted RBP11.36□□□□□ -0.59
HMGCL-207ENST00000498698 GPAA1O43292 621 aa11.36□□□□□ -0.59
HMGCL-207ENST00000498698 SGPL1O95470 568 aa11.36□□□□□ -0.59
HMGCL-207ENST00000498698 HMGCRP04035 888 aa11.36□□□□□ -0.59
HMGCL-207ENST00000498698 XRCC5P13010 732 aaKnown RBP11.36□□□□□ -0.59
HMGCL-207ENST00000498698 MX1P20591 662 aa11.36□□□□□ -0.59
HMGCL-207ENST00000498698 MORN1Q5T089 497 aa11.36□□□□□ -0.59
HMGCL-207ENST00000498698 ANKRD45Q5TZF3 282 aa11.36□□□□□ -0.59
HMGCL-207ENST00000498698 GPR142Q7Z601 462 aa11.36□□□□□ -0.59
HMGCL-207ENST00000498698 SOCS4Q8WXH5 440 aa11.36□□□□□ -0.59
HMGCL-207ENST00000498698 NUDT12Q9BQG2 462 aa11.36□□□□□ -0.59
HMGCL-207ENST00000498698 EPB41L4AQ9HCS5 686 aaPredicted RBP11.36□□□□□ -0.59
HMGCL-207ENST00000498698 BTBD7Q9P203 1132 aa11.36□□□□□ -0.59
HMGCL-207ENST00000498698 ARPP21Q9UBL0 812 aaPredicted RBP11.36□□□□□ -0.59
HMGCL-207ENST00000498698 PTPRFP10586 1907 aa11.36□□□□□ -0.59
HMGCL-207ENST00000498698 FOCADQ5VW36 1801 aa11.35□□□□□ -0.59
HMGCL-207ENST00000498698 M0R2C6 588 aa11.35□□□□□ -0.59
HMGCL-207ENST00000498698 CYP2B6P20813 491 aa11.35□□□□□ -0.59
HMGCL-207ENST00000498698 ICA1Q05084 483 aa11.35□□□□□ -0.59
HMGCL-207ENST00000498698 TRIM32Q13049 653 aa11.35□□□□□ -0.59
HMGCL-207ENST00000498698 AAMPQ13685 434 aa11.35□□□□□ -0.59
HMGCL-207ENST00000498698 COG2Q14746 738 aa11.35□□□□□ -0.59
HMGCL-207ENST00000498698 LRRFIP1Q32MZ4 808 aaKnown RBP11.35□□□□□ -0.59
HMGCL-207ENST00000498698 PLEKHH3Q7Z736 793 aa11.35□□□□□ -0.59
HMGCL-207ENST00000498698 CCAR1Q8IX12 1150 aaKnown RBP11.35□□□□□ -0.59
HMGCL-207ENST00000498698 TRIB2Q92519 343 aa11.35□□□□□ -0.59
HMGCL-207ENST00000498698 LPAR1Q92633 364 aa11.35□□□□□ -0.59
HMGCL-207ENST00000498698 GCC1Q96CN9 775 aa11.35□□□□□ -0.59
HMGCL-207ENST00000498698 DEFB118Q96PH6 123 aa11.35□□□□□ -0.59
HMGCL-207ENST00000498698 SEC62Q99442 399 aaKnown RBP11.35□□□□□ -0.59
HMGCL-207ENST00000498698 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.35□□□□□ -0.59
HMGCL-207ENST00000498698 CRISPLD2Q9H0B8 497 aa11.35□□□□□ -0.59
HMGCL-207ENST00000498698 VCPKMTQ9H867 229 aa11.35□□□□□ -0.59
HMGCL-207ENST00000498698 KANSL2Q9H9L4 492 aa11.35□□□□□ -0.59
HMGCL-207ENST00000498698 ARHGEF10LQ9HCE6 1279 aa11.35□□□□□ -0.59
HMGCL-207ENST00000498698 HOXC10Q9NYD6 342 aa11.35□□□□□ -0.59
HMGCL-207ENST00000498698 STAP2Q9UGK3 403 aa11.35□□□□□ -0.59
HMGCL-207ENST00000498698 DDX60LQ5H9U9 1706 aaKnown RBP11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms