RNA–Protein interactions for RNA: ENST00000498658.5

FXR1-222, Transcript of FMR1 autosomal homolog 1, human

TSL 2

Gene FXR1, Length 683 nt, Biotype retained intron, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FXR1-222	ENST00000498658	HOXA7	P31268	230 aa	Predicted RBP	12.57	□□□□□ -0.4
FXR1-222	ENST00000498658	GCLC	P48506	637 aa	Predicted RBP	12.57	□□□□□ -0.4
FXR1-222	ENST00000498658	IRX6	P78412	446 aa	Predicted RBP	12.57	□□□□□ -0.4
FXR1-222	ENST00000498658	LACTB	P83111	547 aa	Predicted RBP	12.57	□□□□□ -0.4
FXR1-222	ENST00000498658	PLEKHM2	Q8IWE5	1019 aa		12.57	□□□□□ -0.4
FXR1-222	ENST00000498658	CPA4	Q9UI42	421 aa		12.57	□□□□□ -0.4
FXR1-222	ENST00000498658	ADGRA2	Q96PE1	1338 aa		12.57	□□□□□ -0.4
FXR1-222	ENST00000498658	LOC285556	D6RIA3	1793 aa		12.56	□□□□□ -0.4
FXR1-222	ENST00000498658	CCDC85C	A6NKD9	419 aa		12.56	□□□□□ -0.4
FXR1-222	ENST00000498658	HIP1	O00291	1037 aa		12.56	□□□□□ -0.4
FXR1-222	ENST00000498658	CYP2D6	P10635	497 aa		12.56	□□□□□ -0.4
FXR1-222	ENST00000498658	CDK8	P49336	464 aa		12.56	□□□□□ -0.4
FXR1-222	ENST00000498658	IRX3	P78415	501 aa	Predicted RBP	12.56	□□□□□ -0.4
FXR1-222	ENST00000498658	JAG1	P78504	1218 aa		12.56	□□□□□ -0.4
FXR1-222	ENST00000498658	TREML2	Q5T2D2	321 aa		12.56	□□□□□ -0.4
FXR1-222	ENST00000498658	IFNL3	Q8IZI9	196 aa		12.56	□□□□□ -0.4
FXR1-222	ENST00000498658	GTF3C2	Q8WUA4	911 aa	Predicted RBP	12.56	□□□□□ -0.4
FXR1-222	ENST00000498658	C12orf42	Q96LP6	360 aa		12.56	□□□□□ -0.4
FXR1-222	ENST00000498658	KIAA1683	Q9H0B3	1180 aa		12.56	□□□□□ -0.4
FXR1-222	ENST00000498658	NAPB	Q9H115	298 aa		12.56	□□□□□ -0.4
FXR1-222	ENST00000498658	SH2D4A	Q9H788	454 aa		12.56	□□□□□ -0.4
FXR1-222	ENST00000498658	ARHGEF10L	Q9HCE6	1279 aa		12.56	□□□□□ -0.4
FXR1-222	ENST00000498658	HPS5	Q9UPZ3	1129 aa		12.56	□□□□□ -0.4
FXR1-222	ENST00000498658	PTPN22	Q9Y2R2	807 aa		12.56	□□□□□ -0.4
FXR1-222	ENST00000498658	MYH8	P13535	1937 aa		12.56	□□□□□ -0.4
FXR1-222	ENST00000498658	MINDY4B	A8MYZ0	360 aa		12.55	□□□□□ -0.4
FXR1-222	ENST00000498658	BCR	P11274	1271 aa		12.55	□□□□□ -0.4
FXR1-222	ENST00000498658	MFAP1	P55081	439 aa	Known RBP	12.55	□□□□□ -0.4
FXR1-222	ENST00000498658	FCGRT	P55899	365 aa		12.55	□□□□□ -0.4
FXR1-222	ENST00000498658	MCMDC2	Q4G0Z9	681 aa		12.55	□□□□□ -0.4
FXR1-222	ENST00000498658	RILPL2	Q969X0	211 aa		12.55	□□□□□ -0.4
FXR1-222	ENST00000498658	DYNLL2	Q96FJ2	89 aa		12.55	□□□□□ -0.4
FXR1-222	ENST00000498658	MKNK2	Q9HBH9	465 aa		12.55	□□□□□ -0.4
FXR1-222	ENST00000498658	ROBO3	Q96MS0	1386 aa		12.55	□□□□□ -0.4
FXR1-222	ENST00000498658	CYP2D7	A0A087X1C5	515 aa		12.54	□□□□□ -0.4
FXR1-222	ENST00000498658	FMNL1	O95466	1100 aa	Predicted RBP	12.54	□□□□□ -0.4
FXR1-222	ENST00000498658	PSMC4	P43686	418 aa		12.54	□□□□□ -0.4
FXR1-222	ENST00000498658	PDE4B	Q07343	736 aa		12.54	□□□□□ -0.4
FXR1-222	ENST00000498658	SEPT2	Q15019	361 aa		12.54	□□□□□ -0.4
FXR1-222	ENST00000498658	FAM110C	Q1W6H9	321 aa		12.54	□□□□□ -0.4
FXR1-222	ENST00000498658	SHROOM1	Q2M3G4	852 aa	Predicted RBP	12.54	□□□□□ -0.4
FXR1-222	ENST00000498658	NBPF11	Q86T75	865 aa		12.54	□□□□□ -0.4
FXR1-222	ENST00000498658	ZNF444	Q8N0Y2	327 aa	Predicted RBP	12.54	□□□□□ -0.4
FXR1-222	ENST00000498658	SLC44A5	Q8NCS7	719 aa		12.54	□□□□□ -0.4
FXR1-222	ENST00000498658	SEC62	Q99442	399 aa	Known RBP	12.54	□□□□□ -0.4
FXR1-222	ENST00000498658	ASCC2	Q9H1I8	757 aa	Predicted RBP	12.54	□□□□□ -0.4
FXR1-222	ENST00000498658	KANSL2	Q9H9L4	492 aa		12.54	□□□□□ -0.4
FXR1-222	ENST00000498658	EMILIN3	Q9NT22	766 aa		12.54	□□□□□ -0.4
FXR1-222	ENST00000498658	USP17L15	C9J2P7	530 aa		12.53	□□□□□ -0.4
FXR1-222	ENST00000498658	USP17L13	C9JLJ4	530 aa		12.53	□□□□□ -0.4
FXR1-222	ENST00000498658	USP17L11	C9JVI0	530 aa		12.53	□□□□□ -0.4
FXR1-222	ENST00000498658	USP17L18	D6R9N7	530 aa		12.53	□□□□□ -0.4
FXR1-222	ENST00000498658	USP17L22	D6RA61	530 aa		12.53	□□□□□ -0.4
FXR1-222	ENST00000498658	USP17L17	D6RBQ6	530 aa		12.53	□□□□□ -0.4
FXR1-222	ENST00000498658	USP17L19	D6RCP7	530 aa		12.53	□□□□□ -0.4
FXR1-222	ENST00000498658	USP17L20	D6RJB6	530 aa		12.53	□□□□□ -0.4
FXR1-222	ENST00000498658	SDS	P20132	328 aa		12.53	□□□□□ -0.4
FXR1-222	ENST00000498658	GUCY1A2	P33402	732 aa		12.53	□□□□□ -0.4
FXR1-222	ENST00000498658	ICA1	Q05084	483 aa		12.53	□□□□□ -0.4
FXR1-222	ENST00000498658	USP17L24	Q0WX57	530 aa		12.53	□□□□□ -0.4
FXR1-222	ENST00000498658	LPAR1	Q92633	364 aa		12.53	□□□□□ -0.4
FXR1-222	ENST00000498658	AKR1B1	P15121	316 aa		12.52	□□□□□ -0.41
FXR1-222	ENST00000498658	VCAM1	P19320	739 aa		12.52	□□□□□ -0.41
FXR1-222	ENST00000498658	EVX2	Q03828	476 aa		12.52	□□□□□ -0.41
FXR1-222	ENST00000498658	ALX1	Q15699	326 aa		12.52	□□□□□ -0.41
FXR1-222	ENST00000498658	PPP4R3B	Q5MIZ7	849 aa		12.52	□□□□□ -0.41
FXR1-222	ENST00000498658	ANKRD13C	Q8N6S4	541 aa		12.52	□□□□□ -0.41
FXR1-222	ENST00000498658	ACER1	Q8TDN7	264 aa		12.52	□□□□□ -0.41
FXR1-222	ENST00000498658	EPB41L4A	Q9HCS5	686 aa	Predicted RBP	12.52	□□□□□ -0.41
FXR1-222	ENST00000498658	DIAPH3	Q9NSV4	1193 aa		12.52	□□□□□ -0.41
FXR1-222	ENST00000498658	SRRD	Q9UH36	339 aa		12.52	□□□□□ -0.41
FXR1-222	ENST00000498658	TMX2	Q9Y320	296 aa		12.52	□□□□□ -0.41
FXR1-222	ENST00000498658	HERVK_113	P62684	666 aa		12.51	□□□□□ -0.41
FXR1-222	ENST00000498658	PPARA	Q07869	468 aa		12.51	□□□□□ -0.41
FXR1-222	ENST00000498658	ZYX	Q15942	572 aa	Known RBP	12.51	□□□□□ -0.41
FXR1-222	ENST00000498658	SLC9C1	Q4G0N8	1177 aa		12.51	□□□□□ -0.41
FXR1-222	ENST00000498658	CATSPERG	Q6ZRH7	1159 aa		12.51	□□□□□ -0.41
FXR1-222	ENST00000498658	GPRC5A	Q8NFJ5	357 aa		12.51	□□□□□ -0.41
FXR1-222	ENST00000498658	COA7	Q96BR5	231 aa		12.51	□□□□□ -0.41
FXR1-222	ENST00000498658	TRIM47	Q96LD4	638 aa		12.51	□□□□□ -0.41
FXR1-222	ENST00000498658	FAM227B	Q96M60	508 aa		12.51	□□□□□ -0.41
FXR1-222	ENST00000498658	GOPC	Q9HD26	462 aa		12.51	□□□□□ -0.41
FXR1-222	ENST00000498658	MORF4L1	Q9UBU8	362 aa		12.51	□□□□□ -0.41
FXR1-222	ENST00000498658	SYNPO2	Q9UMS6	1093 aa		12.51	□□□□□ -0.41
FXR1-222	ENST00000498658	TNPO2	O14787	897 aa	Known RBP	12.5	□□□□□ -0.41
FXR1-222	ENST00000498658	RASA1	P20936	1047 aa		12.5	□□□□□ -0.41
FXR1-222	ENST00000498658	CCNA1	P78396	465 aa		12.5	□□□□□ -0.41
FXR1-222	ENST00000498658	NMI	Q13287	307 aa	Predicted RBP	12.5	□□□□□ -0.41
FXR1-222	ENST00000498658	CCDC129	Q6ZRS4	1044 aa		12.5	□□□□□ -0.41
FXR1-222	ENST00000498658	CCAR1	Q8IX12	1150 aa	Known RBP	12.5	□□□□□ -0.41
FXR1-222	ENST00000498658	SPDYE1	Q8NFV5	336 aa	Predicted RBP	12.5	□□□□□ -0.41
FXR1-222	ENST00000498658	RAET1E	Q8TD07	263 aa		12.5	□□□□□ -0.41
FXR1-222	ENST00000498658	ARMC5	Q96C12	935 aa		12.5	□□□□□ -0.41
FXR1-222	ENST00000498658	P2RX7	Q99572	595 aa	Known RBP	12.5	□□□□□ -0.41
FXR1-222	ENST00000498658	ARHGAP39	Q9C0H5	1083 aa		12.5	□□□□□ -0.41
FXR1-222	ENST00000498658	HOXC10	Q9NYD6	342 aa		12.5	□□□□□ -0.41
FXR1-222	ENST00000498658	ZMYM6	O95789	1325 aa		12.5	□□□□□ -0.41
FXR1-222	ENST00000498658	CCDC171	Q6TFL3	1326 aa		12.5	□□□□□ -0.41
FXR1-222	ENST00000498658	MYPN	Q86TC9	1320 aa		12.5	□□□□□ -0.41
FXR1-222	ENST00000498658		A0A0D9SFI3	127 aa		12.49	□□□□□ -0.41

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