RNA–Protein interactions for RNA: ENST00000498653.5

FXN-205, Transcript of frataxin, humanhuman

TSL 1 (best) BASIC

Gene FXN, Length 856 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXN-205ENST00000498653 GJC2Q5T442 439 aaPredicted RBP6.9□□□□□ -1.3
FXN-205ENST00000498653 KIAA0319Q5VV43 1072 aa6.9□□□□□ -1.3
FXN-205ENST00000498653 LRSAM1Q6UWE0 723 aa6.9□□□□□ -1.3
FXN-205ENST00000498653 PACS2Q86VP3 889 aa6.9□□□□□ -1.3
FXN-205ENST00000498653 RNF135Q8IUD6 432 aa6.9□□□□□ -1.3
FXN-205ENST00000498653 CRIPAKQ8N1N5 446 aa6.9□□□□□ -1.3
FXN-205ENST00000498653 ANKRD13CQ8N6S4 541 aa6.9□□□□□ -1.3
FXN-205ENST00000498653 ASIC4Q96FT7 647 aa6.9□□□□□ -1.3
FXN-205ENST00000498653 CDCA7LQ96GN5 454 aa6.9□□□□□ -1.3
FXN-205ENST00000498653 PRMT6Q96LA8 375 aaPredicted RBP6.9□□□□□ -1.3
FXN-205ENST00000498653 UPF3BQ9BZI7 483 aaKnown RBP6.9□□□□□ -1.3
FXN-205ENST00000498653 NPDC1Q9NQX5 325 aaPredicted RBP6.9□□□□□ -1.3
FXN-205ENST00000498653 MYBBP1AQ9BQG0 1328 aaKnown RBP6.9□□□□□ -1.3
FXN-205ENST00000498653 CNOT1A5YKK6 2376 aaKnown RBP6.9□□□□□ -1.31
FXN-205ENST00000498653 RALGAPA2Q2PPJ7 1873 aa6.9□□□□□ -1.31
FXN-205ENST00000498653 TK2O00142 265 aa6.89□□□□□ -1.31
FXN-205ENST00000498653 TAF4O00268 1085 aa6.89□□□□□ -1.31
FXN-205ENST00000498653 GPR37O15354 613 aa6.89□□□□□ -1.31
FXN-205ENST00000498653 ARHGEF15O94989 841 aa6.89□□□□□ -1.31
FXN-205ENST00000498653 HSPA5P11021 654 aaKnown RBP6.89□□□□□ -1.31
FXN-205ENST00000498653 CCL14Q16627 93 aa6.89□□□□□ -1.31
FXN-205ENST00000498653 MTHFSDQ2M296 383 aaKnown RBP6.89□□□□□ -1.31
FXN-205ENST00000498653 GIGYF2Q6Y7W6 1299 aaKnown RBP6.89□□□□□ -1.31
FXN-205ENST00000498653 ZNF365Q70YC5 407 aa6.89□□□□□ -1.31
FXN-205ENST00000498653 NEK9Q8TD19 979 aa6.89□□□□□ -1.31
FXN-205ENST00000498653 TMEM39BQ9GZU3 492 aa6.89□□□□□ -1.31
FXN-205ENST00000498653 DDX20Q9UHI6 824 aaKnown RBP6.89□□□□□ -1.31
FXN-205ENST00000498653 MED23Q9ULK4 1368 aa6.89□□□□□ -1.31
FXN-205ENST00000498653 TNKSO95271 1327 aa6.88□□□□□ -1.31
FXN-205ENST00000498653 TRIM6-TRIM34B2RNG4 842 aa6.88□□□□□ -1.31
FXN-205ENST00000498653 SNRPA1P09661 255 aaKnown RBP6.88□□□□□ -1.31
FXN-205ENST00000498653 ACRP10323 421 aa6.88□□□□□ -1.31
FXN-205ENST00000498653 XRCC5P13010 732 aaKnown RBP6.88□□□□□ -1.31
FXN-205ENST00000498653 ZKSCAN1P17029 563 aaPredicted RBP6.88□□□□□ -1.31
FXN-205ENST00000498653 ATXN1P54253 815 aaKnown RBP6.88□□□□□ -1.31
FXN-205ENST00000498653 LSM11P83369 360 aaKnown RBP eCLIP6.88□□□□□ -1.31
FXN-205ENST00000498653 ZXDAP98168 799 aa6.88□□□□□ -1.31
FXN-205ENST00000498653 MAP2K5Q13163 448 aa6.88□□□□□ -1.31
FXN-205ENST00000498653 PUS10Q3MIT2 529 aaKnown RBP6.88□□□□□ -1.31
FXN-205ENST00000498653 CFAP100Q494V2 611 aa6.88□□□□□ -1.31
FXN-205ENST00000498653 PSRC1Q6PGN9 363 aaPredicted RBP6.88□□□□□ -1.31
FXN-205ENST00000498653 PADI6Q6TGC4 694 aa6.88□□□□□ -1.31
FXN-205ENST00000498653 CERS5Q8N5B7 392 aa6.88□□□□□ -1.31
FXN-205ENST00000498653 NGEFQ8N5V2 710 aa6.88□□□□□ -1.31
FXN-205ENST00000498653 IL17REQ8NFR9 667 aa6.88□□□□□ -1.31
FXN-205ENST00000498653 ZBED2Q9BTP6 218 aa6.88□□□□□ -1.31
FXN-205ENST00000498653 PCDHA11Q9Y5I1 949 aa6.88□□□□□ -1.31
FXN-205ENST00000498653 LAMA5O15230 3695 aa6.88□□□□□ -1.31
FXN-205ENST00000498653 ABCA12Q86UK0 2595 aa6.87□□□□□ -1.31
FXN-205ENST00000498653 MYO9AB2RTY4 2548 aa6.87□□□□□ -1.31
FXN-205ENST00000498653 SH3TC1Q8TE82 1336 aa6.87□□□□□ -1.31
FXN-205ENST00000498653 MYO1BO43795 1136 aa6.87□□□□□ -1.31
FXN-205ENST00000498653 CA3P07451 260 aa6.87□□□□□ -1.31
FXN-205ENST00000498653 CSF2RAP15509 400 aa6.87□□□□□ -1.31
FXN-205ENST00000498653 TEFQ10587 303 aa6.87□□□□□ -1.31
FXN-205ENST00000498653 PPIGQ13427 754 aaKnown RBP eCLIP6.87□□□□□ -1.31
FXN-205ENST00000498653 TNFAIP1Q13829 316 aa6.87□□□□□ -1.31
FXN-205ENST00000498653 KIF6Q6ZMV9 814 aa6.87□□□□□ -1.31
FXN-205ENST00000498653 SPRED2Q7Z698 418 aa6.87□□□□□ -1.31
FXN-205ENST00000498653 SMCR8Q8TEV9 937 aaPredicted RBP6.87□□□□□ -1.31
FXN-205ENST00000498653 CARD14Q9BXL6 1004 aa6.87□□□□□ -1.31
FXN-205ENST00000498653 ANKIB1Q9P2G1 1089 aa6.87□□□□□ -1.31
FXN-205ENST00000498653 RABGEF1Q9UJ41 708 aa6.87□□□□□ -1.31
FXN-205ENST00000498653 SLC45A1Q9Y2W3 748 aa6.87□□□□□ -1.31
FXN-205ENST00000498653 LOC285556D6RIA3 1793 aa6.87□□□□□ -1.31
FXN-205ENST00000498653 DMXL2Q8TDJ6 3036 aa6.87□□□□□ -1.31
FXN-205ENST00000498653 SPEF2Q9C093 1822 aa6.86□□□□□ -1.31
FXN-205ENST00000498653 H3BQ06 376 aaPredicted RBP6.86□□□□□ -1.31
FXN-205ENST00000498653 TIMP1P01033 207 aa6.86□□□□□ -1.31
FXN-205ENST00000498653 OATP04181 439 aa6.86□□□□□ -1.31
FXN-205ENST00000498653 INPP5BP32019 993 aa6.86□□□□□ -1.31
FXN-205ENST00000498653 RING1Q06587 406 aa6.86□□□□□ -1.31
FXN-205ENST00000498653 FAAP100Q0VG06 881 aa6.86□□□□□ -1.31
FXN-205ENST00000498653 DMRTA1Q5VZB9 504 aa6.86□□□□□ -1.31
FXN-205ENST00000498653 MFSD5Q6N075 450 aa6.86□□□□□ -1.31
FXN-205ENST00000498653 SLC44A5Q8NCS7 719 aa6.86□□□□□ -1.31
FXN-205ENST00000498653 ARNTL2Q8WYA1 636 aa6.86□□□□□ -1.31
FXN-205ENST00000498653 USP6NLQ92738 828 aa6.86□□□□□ -1.31
FXN-205ENST00000498653 TMEM39AQ9NV64 488 aa6.86□□□□□ -1.31
FXN-205ENST00000498653 TBX21Q9UL17 535 aa6.86□□□□□ -1.31
FXN-205ENST00000498653 ZMIZ1Q9ULJ6 1067 aa6.86□□□□□ -1.31
FXN-205ENST00000498653 PIEZO2Q9H5I5 2752 aa6.86□□□□□ -1.31
FXN-205ENST00000498653 XDHP47989 1333 aa6.85□□□□□ -1.31
FXN-205ENST00000498653 A0A0G2JLL6 359 aaPredicted RBP6.85□□□□□ -1.31
FXN-205ENST00000498653 KBTBD13C9JR72 458 aa6.85□□□□□ -1.31
FXN-205ENST00000498653 PQBP1O60828 265 aaKnown RBP6.85□□□□□ -1.31
FXN-205ENST00000498653 PDGFBP01127 241 aaPredicted RBP6.85□□□□□ -1.31
FXN-205ENST00000498653 PROS1P07225 676 aa6.85□□□□□ -1.31
FXN-205ENST00000498653 ADCYAP1R1P41586 468 aa6.85□□□□□ -1.31
FXN-205ENST00000498653 SIGLEC14Q08ET2 396 aa6.85□□□□□ -1.31
FXN-205ENST00000498653 SF3B3Q15393 1217 aaKnown RBP6.85□□□□□ -1.31
FXN-205ENST00000498653 PROX2Q3B8N5 592 aa6.85□□□□□ -1.31
FXN-205ENST00000498653 SOWAHCQ53LP3 525 aaPredicted RBP6.85□□□□□ -1.31
FXN-205ENST00000498653 TTLL5Q6EMB2 1281 aa6.85□□□□□ -1.31
FXN-205ENST00000498653 CCDC174Q6PII3 467 aa6.85□□□□□ -1.31
FXN-205ENST00000498653 ADGRD1Q6QNK2 874 aa6.85□□□□□ -1.31
FXN-205ENST00000498653 PRRT2Q7Z6L0 340 aaPredicted RBP6.85□□□□□ -1.31
FXN-205ENST00000498653 TTC13Q8NBP0 860 aa6.85□□□□□ -1.31
FXN-205ENST00000498653 FERMT2Q96AC1 680 aa6.85□□□□□ -1.31
FXN-205ENST00000498653 TESK2Q96S53 571 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms