RNA–Protein interactions for RNA: ENST00000498500.1

THBS3-209, Transcript of thrombospondin 3, humanhuman

TSL 2

Gene THBS3, Length 768 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-209ENST00000498500 ZBTB21Q9ULJ3 1066 aa14.72□□□□□ -0.05
THBS3-209ENST00000498500 NDUFB9Q9Y6M9 179 aa14.72□□□□□ -0.05
THBS3-209ENST00000498500 RLFQ13129 1914 aa14.71□□□□□ -0.05
THBS3-209ENST00000498500 ARID4AP29374 1257 aaPredicted RBP14.71□□□□□ -0.05
THBS3-209ENST00000498500 MCAMP43121 646 aa14.71□□□□□ -0.05
THBS3-209ENST00000498500 CCNA1P78396 465 aa14.71□□□□□ -0.05
THBS3-209ENST00000498500 SHROOM1Q2M3G4 852 aaPredicted RBP14.71□□□□□ -0.05
THBS3-209ENST00000498500 USP17L2Q6R6M4 530 aa14.71□□□□□ -0.05
THBS3-209ENST00000498500 DNAJC18Q9H819 358 aa14.71□□□□□ -0.05
THBS3-209ENST00000498500 EMILIN3Q9NT22 766 aa14.71□□□□□ -0.05
THBS3-209ENST00000498500 DDX20Q9UHI6 824 aaKnown RBP14.71□□□□□ -0.05
THBS3-209ENST00000498500 PALD1Q9ULE6 856 aa14.71□□□□□ -0.05
THBS3-209ENST00000498500 DDX19BQ9UMR2 479 aa14.71□□□□□ -0.05
THBS3-209ENST00000498500 NOP58Q9Y2X3 529 aaKnown RBP14.71□□□□□ -0.05
THBS3-209ENST00000498500 EYSQ5T1H1 3165 aa14.71□□□□□ -0.05
THBS3-209ENST00000498500 MSCO60682 206 aa14.7□□□□□ -0.06
THBS3-209ENST00000498500 UQCRFS1P1P0C7P4 283 aa14.7□□□□□ -0.06
THBS3-209ENST00000498500 RTP1P59025 263 aa14.7□□□□□ -0.06
THBS3-209ENST00000498500 ATP2B2Q01814 1243 aa14.7□□□□□ -0.06
THBS3-209ENST00000498500 G3BP1Q13283 466 aaKnown RBP eCLIP14.7□□□□□ -0.06
THBS3-209ENST00000498500 ZYXQ15942 572 aaKnown RBP14.7□□□□□ -0.06
THBS3-209ENST00000498500 LPAR1Q92633 364 aa14.7□□□□□ -0.06
THBS3-209ENST00000498500 CDX2Q99626 313 aaPredicted RBP14.7□□□□□ -0.06
THBS3-209ENST00000498500 ZBTB40Q9NUA8 1239 aa14.7□□□□□ -0.06
THBS3-209ENST00000498500 FLRT1Q9NZU1 646 aa14.7□□□□□ -0.06
THBS3-209ENST00000498500 RABGAP1Q9Y3P9 1069 aa14.7□□□□□ -0.06
THBS3-209ENST00000498500 IVNS1ABPQ9Y6Y0 642 aa14.7□□□□□ -0.06
THBS3-209ENST00000498500 FLT1P17948 1338 aa14.69□□□□□ -0.06
THBS3-209ENST00000498500 VCANP13611 3396 aa14.69□□□□□ -0.06
THBS3-209ENST00000498500 USP17L15C9J2P7 530 aa14.69□□□□□ -0.06
THBS3-209ENST00000498500 USP17L13C9JLJ4 530 aa14.69□□□□□ -0.06
THBS3-209ENST00000498500 USP17L11C9JVI0 530 aa14.69□□□□□ -0.06
THBS3-209ENST00000498500 USP17L18D6R9N7 530 aa14.69□□□□□ -0.06
THBS3-209ENST00000498500 USP17L22D6RA61 530 aa14.69□□□□□ -0.06
THBS3-209ENST00000498500 USP17L17D6RBQ6 530 aa14.69□□□□□ -0.06
THBS3-209ENST00000498500 USP17L19D6RCP7 530 aa14.69□□□□□ -0.06
THBS3-209ENST00000498500 USP17L20D6RJB6 530 aa14.69□□□□□ -0.06
THBS3-209ENST00000498500 HLA-DOAP06340 250 aa14.69□□□□□ -0.06
THBS3-209ENST00000498500 USP17L24Q0WX57 530 aa14.69□□□□□ -0.06
THBS3-209ENST00000498500 POTEEQ6S8J3 1075 aa14.69□□□□□ -0.06
THBS3-209ENST00000498500 METTL16Q86W50 562 aaKnown RBP14.69□□□□□ -0.06
THBS3-209ENST00000498500 YTHDC1Q96MU7 727 aaKnown RBP14.69□□□□□ -0.06
THBS3-209ENST00000498500 FEZ1Q99689 392 aa14.69□□□□□ -0.06
THBS3-209ENST00000498500 SNRKQ9NRH2 765 aa14.69□□□□□ -0.06
THBS3-209ENST00000498500 SAP30BPQ9UHR5 308 aaKnown RBP14.69□□□□□ -0.06
THBS3-209ENST00000498500 ATP11BQ9Y2G3 1177 aa14.69□□□□□ -0.06
THBS3-209ENST00000498500 SLC15A5A6NIM6 579 aa14.68□□□□□ -0.06
THBS3-209ENST00000498500 DNM1LO00429 736 aa14.68□□□□□ -0.06
THBS3-209ENST00000498500 SURF6O75683 361 aaKnown RBP14.68□□□□□ -0.06
THBS3-209ENST00000498500 PTPREP23469 700 aa14.68□□□□□ -0.06
THBS3-209ENST00000498500 PPP4CP60510 307 aa14.68□□□□□ -0.06
THBS3-209ENST00000498500 SHHQ15465 462 aa14.68□□□□□ -0.06
THBS3-209ENST00000498500 TNNI3KQ59H18 835 aa14.68□□□□□ -0.06
THBS3-209ENST00000498500 SIRT2Q8IXJ6 389 aa14.68□□□□□ -0.06
THBS3-209ENST00000498500 MAFAQ8NHW3 353 aaPredicted RBP14.68□□□□□ -0.06
THBS3-209ENST00000498500 SEMA6BQ9H3T3 888 aa14.68□□□□□ -0.06
THBS3-209ENST00000498500 GPR108Q9NPR9 543 aa14.68□□□□□ -0.06
THBS3-209ENST00000498500 FPGT-TNNI3KV9GXZ4 949 aa14.68□□□□□ -0.06
THBS3-209ENST00000498500 CNMDO75829 334 aa14.67□□□□□ -0.06
THBS3-209ENST00000498500 GH2P01242 217 aa14.67□□□□□ -0.06
THBS3-209ENST00000498500 CYP2C19P33261 490 aa14.67□□□□□ -0.06
THBS3-209ENST00000498500 TTC39AQ5SRH9 613 aa14.67□□□□□ -0.06
THBS3-209ENST00000498500 GJC2Q5T442 439 aaPredicted RBP14.67□□□□□ -0.06
THBS3-209ENST00000498500 PRDM5Q9NQX1 630 aaPredicted RBP14.67□□□□□ -0.06
THBS3-209ENST00000498500 PRUNE2Q8WUY3 3088 aa14.66□□□□□ -0.06
THBS3-209ENST00000498500 MYCNP04198 464 aaPredicted RBP14.66□□□□□ -0.06
THBS3-209ENST00000498500 USP14P54578 494 aa14.66□□□□□ -0.06
THBS3-209ENST00000498500 RAB3GAP1Q15042 981 aa14.66□□□□□ -0.06
THBS3-209ENST00000498500 C9orf50Q5SZB4 431 aa14.66□□□□□ -0.06
THBS3-209ENST00000498500 CATSPERGQ6ZRH7 1159 aa14.66□□□□□ -0.06
THBS3-209ENST00000498500 ADGRA1Q86SQ6 560 aa14.66□□□□□ -0.06
THBS3-209ENST00000498500 ARRDC4Q8NCT1 418 aa14.66□□□□□ -0.06
THBS3-209ENST00000498500 NPLOC4Q8TAT6 608 aa14.66□□□□□ -0.06
THBS3-209ENST00000498500 C12orf42Q96LP6 360 aa14.66□□□□□ -0.06
THBS3-209ENST00000498500 DBNDD2Q9BQY9 259 aa14.66□□□□□ -0.06
THBS3-209ENST00000498500 EXOC6BQ9Y2D4 811 aa14.66□□□□□ -0.06
THBS3-209ENST00000498500 ZNFX1Q9P2E3 1918 aaKnown RBP14.65□□□□□ -0.06
THBS3-209ENST00000498500 KBTBD13C9JR72 458 aa14.65□□□□□ -0.06
THBS3-209ENST00000498500 HOXC6P09630 235 aa14.65□□□□□ -0.06
THBS3-209ENST00000498500 OS9Q13438 667 aaPredicted RBP14.65□□□□□ -0.06
THBS3-209ENST00000498500 GRB14Q14449 540 aa14.65□□□□□ -0.06
THBS3-209ENST00000498500 CCDC158Q5M9N0 1113 aa14.65□□□□□ -0.06
THBS3-209ENST00000498500 SLC39A5Q6ZMH5 540 aa14.65□□□□□ -0.06
THBS3-209ENST00000498500 DPP9Q86TI2 863 aa14.65□□□□□ -0.06
THBS3-209ENST00000498500 TRPV1Q8NER1 839 aa14.65□□□□□ -0.06
THBS3-209ENST00000498500 MYLIPQ8WY64 445 aa14.65□□□□□ -0.06
THBS3-209ENST00000498500 PRDM6Q9NQX0 595 aa14.65□□□□□ -0.06
THBS3-209ENST00000498500 TLR7Q9NYK1 1049 aaKnown RBP14.65□□□□□ -0.06
THBS3-209ENST00000498500 BTBD7Q9P203 1132 aa14.65□□□□□ -0.06
THBS3-209ENST00000498500 SMCHD1A6NHR9 2005 aa14.65□□□□□ -0.06
THBS3-209ENST00000498500 CYP2E1P05181 493 aaPredicted RBP14.64□□□□□ -0.07
THBS3-209ENST00000498500 VCAM1P19320 739 aa14.64□□□□□ -0.07
THBS3-209ENST00000498500 RRP1P56182 461 aaKnown RBP14.64□□□□□ -0.07
THBS3-209ENST00000498500 DYNLL1P63167 89 aaKnown RBP14.64□□□□□ -0.07
THBS3-209ENST00000498500 ANO1Q5XXA6 986 aa14.64□□□□□ -0.07
THBS3-209ENST00000498500 RPAP2Q8IXW5 612 aaPredicted RBP14.64□□□□□ -0.07
THBS3-209ENST00000498500 BADQ92934 168 aa14.64□□□□□ -0.07
THBS3-209ENST00000498500 DBNLQ9UJU6 430 aaKnown RBP14.64□□□□□ -0.07
THBS3-209ENST00000498500 CYBAP13498 195 aa14.63□□□□□ -0.07
THBS3-209ENST00000498500 FOSL2P15408 326 aa14.63□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms