RNA–Protein interactions for RNA: ENST00000498284.1

PTPRK-215, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5

Gene PTPRK, Length 524 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-215ENST00000498284 NME1P15531 152 aaKnown RBP7.05□□□□□ -1.28
PTPRK-215ENST00000498284 GIPRP48546 466 aa7.05□□□□□ -1.28
PTPRK-215ENST00000498284 CPSF6Q16630 551 aaKnown RBP eCLIP7.05□□□□□ -1.28
PTPRK-215ENST00000498284 LSRQ86X29 649 aaPredicted RBP7.05□□□□□ -1.28
PTPRK-215ENST00000498284 DNAJB8Q8NHS0 232 aa7.05□□□□□ -1.28
PTPRK-215ENST00000498284 BAHD1Q8TBE0 780 aaPredicted RBP7.05□□□□□ -1.28
PTPRK-215ENST00000498284 PPP1R13LQ8WUF5 828 aa7.05□□□□□ -1.28
PTPRK-215ENST00000498284 SHDQ96IW2 340 aa7.05□□□□□ -1.28
PTPRK-215ENST00000498284 TM9SF2Q99805 663 aa7.05□□□□□ -1.28
PTPRK-215ENST00000498284 PIM2Q9P1W9 311 aa7.05□□□□□ -1.28
PTPRK-215ENST00000498284 TPX2Q9ULW0 747 aaKnown RBP7.05□□□□□ -1.28
PTPRK-215ENST00000498284 LEMD3Q9Y2U8 911 aa7.05□□□□□ -1.28
PTPRK-215ENST00000498284 TNFRSF10CO14798 259 aa7.04□□□□□ -1.28
PTPRK-215ENST00000498284 GBP1P32455 592 aa7.04□□□□□ -1.28
PTPRK-215ENST00000498284 RUFY4Q6ZNE9 571 aa7.04□□□□□ -1.28
PTPRK-215ENST00000498284 OR6P1Q8NGX9 317 aa7.04□□□□□ -1.28
PTPRK-215ENST00000498284 ANAPC16Q96DE5 110 aa7.04□□□□□ -1.28
PTPRK-215ENST00000498284 HEXIM2Q96MH2 286 aaKnown RBP7.04□□□□□ -1.28
PTPRK-215ENST00000498284 LRRC4CQ9HCJ2 640 aa7.04□□□□□ -1.28
PTPRK-215ENST00000498284 PRDM5Q9NQX1 630 aaPredicted RBP7.04□□□□□ -1.28
PTPRK-215ENST00000498284 GTF2IRD1Q9UHL9 959 aa7.04□□□□□ -1.28
PTPRK-215ENST00000498284 CNTNAP4Q9C0A0 1308 aa7.03□□□□□ -1.28
PTPRK-215ENST00000498284 CYP26A1O43174 497 aa7.03□□□□□ -1.28
PTPRK-215ENST00000498284 UBOX5O94941 541 aa7.03□□□□□ -1.28
PTPRK-215ENST00000498284 TGFB1P01137 390 aa7.03□□□□□ -1.28
PTPRK-215ENST00000498284 POLR2BP30876 1174 aaKnown RBP7.03□□□□□ -1.28
PTPRK-215ENST00000498284 CCNFP41002 786 aa7.03□□□□□ -1.28
PTPRK-215ENST00000498284 ETV3P41162 512 aa7.03□□□□□ -1.28
PTPRK-215ENST00000498284 INTS3Q68E01 1043 aaKnown RBP7.03□□□□□ -1.28
PTPRK-215ENST00000498284 ZNF746Q6NUN9 644 aaPredicted RBP7.03□□□□□ -1.28
PTPRK-215ENST00000498284 SLC9A7Q96T83 725 aa7.03□□□□□ -1.28
PTPRK-215ENST00000498284 TANGO6Q9C0B7 1094 aa7.03□□□□□ -1.28
PTPRK-215ENST00000498284 MRVI1Q9Y6F6 885 aa7.03□□□□□ -1.28
PTPRK-215ENST00000498284 IGF2BP3O00425 579 aaKnown RBP eCLIP7.02□□□□□ -1.29
PTPRK-215ENST00000498284 ACRP10323 421 aa7.02□□□□□ -1.29
PTPRK-215ENST00000498284 FOSL1P15407 271 aa7.02□□□□□ -1.29
PTPRK-215ENST00000498284 CYP7A1P22680 504 aa7.02□□□□□ -1.29
PTPRK-215ENST00000498284 GUCY2CP25092 1073 aa7.02□□□□□ -1.29
PTPRK-215ENST00000498284 SFRP5Q5T4F7 317 aa7.02□□□□□ -1.29
PTPRK-215ENST00000498284 TAB3Q8N5C8 712 aaPredicted RBP7.02□□□□□ -1.29
PTPRK-215ENST00000498284 MAPK8IP1Q9UQF2 711 aa7.02□□□□□ -1.29
PTPRK-215ENST00000498284 CHMP4BP1P59074 171 aa7.01□□□□□ -1.29
PTPRK-215ENST00000498284 ARHGAP27Q6ZUM4 889 aa7.01□□□□□ -1.29
PTPRK-215ENST00000498284 FAM169BQ8N8A8 192 aa7.01□□□□□ -1.29
PTPRK-215ENST00000498284 FAM181AQ8N9Y4 354 aa7.01□□□□□ -1.29
PTPRK-215ENST00000498284 RNF112Q9ULX5 631 aa7.01□□□□□ -1.29
PTPRK-215ENST00000498284 COL17A1Q9UMD9 1497 aaPredicted RBP7□□□□□ -1.29
PTPRK-215ENST00000498284 FAM86C2PA6NEL3 165 aa7□□□□□ -1.29
PTPRK-215ENST00000498284 GNAT3A8MTJ3 354 aa7□□□□□ -1.29
PTPRK-215ENST00000498284 HOXA10P31260 410 aaPredicted RBP7□□□□□ -1.29
PTPRK-215ENST00000498284 ETFBP38117 255 aa7□□□□□ -1.29
PTPRK-215ENST00000498284 OXCT1P55809 520 aa7□□□□□ -1.29
PTPRK-215ENST00000498284 UNC5AQ6ZN44 842 aa7□□□□□ -1.29
PTPRK-215ENST00000498284 C19orf47Q8N9M1 422 aaKnown RBP7□□□□□ -1.29
PTPRK-215ENST00000498284 COX4I2Q96KJ9 171 aa7□□□□□ -1.29
PTPRK-215ENST00000498284 KREMEN1Q96MU8 473 aa7□□□□□ -1.29
PTPRK-215ENST00000498284 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP7□□□□□ -1.296e-9■□□□□ 9.6
PTPRK-215ENST00000498284 ZNF408Q9H9D4 720 aa7□□□□□ -1.29
PTPRK-215ENST00000498284 MKNK2Q9HBH9 465 aa7□□□□□ -1.29
PTPRK-215ENST00000498284 U3KQE9 123 aa7□□□□□ -1.29
PTPRK-215ENST00000498284 CBX7O95931 251 aa6.99□□□□□ -1.29
PTPRK-215ENST00000498284 ATP2B1P20020 1258 aa6.99□□□□□ -1.29
PTPRK-215ENST00000498284 GRIK1P39086 918 aa6.99□□□□□ -1.29
PTPRK-215ENST00000498284 ZYXQ15942 572 aaKnown RBP6.99□□□□□ -1.29
PTPRK-215ENST00000498284 PPP2R5EQ16537 467 aa6.99□□□□□ -1.29
PTPRK-215ENST00000498284 C22orf34Q6ZV56 151 aa6.99□□□□□ -1.29
PTPRK-215ENST00000498284 TTC6Q86TZ1 520 aa6.99□□□□□ -1.29
PTPRK-215ENST00000498284 TMEM192Q8IY95 271 aa6.99□□□□□ -1.29
PTPRK-215ENST00000498284 RNF141Q8WVD5 230 aa6.99□□□□□ -1.29
PTPRK-215ENST00000498284 DHRS1Q96LJ7 313 aa6.99□□□□□ -1.29
PTPRK-215ENST00000498284 SLC6A18Q96N87 628 aa6.99□□□□□ -1.29
PTPRK-215ENST00000498284 ZC3H7BQ9UGR2 993 aaKnown RBP6.99□□□□□ -1.29
PTPRK-215ENST00000498284 A0A1W2PQH9 124 aa6.98□□□□□ -1.29
PTPRK-215ENST00000498284 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.98□□□□□ -1.29
PTPRK-215ENST00000498284 PRR33A8MZF0 331 aa6.98□□□□□ -1.29
PTPRK-215ENST00000498284 RBAK-RBAKDNI3L0D1 243 aa6.98□□□□□ -1.29
PTPRK-215ENST00000498284 SMAD7O15105 426 aaKnown RBP6.98□□□□□ -1.29
PTPRK-215ENST00000498284 COBLO75128 1261 aa6.98□□□□□ -1.29
PTPRK-215ENST00000498284 CLEC3AO75596 197 aa6.98□□□□□ -1.29
PTPRK-215ENST00000498284 ZNF865P0CJ78 1059 aaPredicted RBP6.98□□□□□ -1.29
PTPRK-215ENST00000498284 ITIH2P19823 946 aa6.98□□□□□ -1.29
PTPRK-215ENST00000498284 KIR3DL1P43629 444 aa6.98□□□□□ -1.29
PTPRK-215ENST00000498284 CASP7P55210 303 aa6.98□□□□□ -1.29
PTPRK-215ENST00000498284 SF3A1Q15459 793 aaKnown RBP6.98□□□□□ -1.29
PTPRK-215ENST00000498284 INTS5Q6P9B9 1019 aaKnown RBP6.98□□□□□ -1.29
PTPRK-215ENST00000498284 SREK1Q8WXA9 508 aaKnown RBP6.98□□□□□ -1.29
PTPRK-215ENST00000498284 VWCEQ96DN2 955 aa6.98□□□□□ -1.29
PTPRK-215ENST00000498284 ASPNQ9BXN1 380 aa6.98□□□□□ -1.29
PTPRK-215ENST00000498284 KRTAP9-2Q9BYQ4 174 aa6.98□□□□□ -1.29
PTPRK-215ENST00000498284 PRKAG3Q9UGI9 489 aa6.98□□□□□ -1.29
PTPRK-215ENST00000498284 RNF4P78317 190 aa6.97□□□□□ -1.29
PTPRK-215ENST00000498284 TNNI3KQ59H18 835 aa6.97□□□□□ -1.29
PTPRK-215ENST00000498284 NBPF12Q5TAG4 269 aaPredicted RBP6.97□□□□□ -1.29
PTPRK-215ENST00000498284 PLD6Q8N2A8 252 aaKnown RBP6.97□□□□□ -1.29
PTPRK-215ENST00000498284 MFSD4AQ8N468 514 aa6.97□□□□□ -1.29
PTPRK-215ENST00000498284 NETO1Q8TDF5 533 aa6.97□□□□□ -1.29
PTPRK-215ENST00000498284 FBXL18Q96ME1 805 aa6.97□□□□□ -1.29
PTPRK-215ENST00000498284 TNKS2Q9H2K2 1166 aa6.97□□□□□ -1.29
PTPRK-215ENST00000498284 SUCOQ9UBS9 1254 aaKnown RBP6.97□□□□□ -1.29
PTPRK-215ENST00000498284 PLAGL2Q9UPG8 496 aa6.97□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms