RNA–Protein interactions for RNA: ENST00000498219.5

HPS1-214, Transcript of HPS1, biogenesis of lysosomal organelles complex 3 subunit 1, humanhuman

TSL 5

Gene HPS1, Length 845 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1-214ENST00000498219 TRIM17Q9Y577 477 aa17.6■□□□□ 0.41
HPS1-214ENST00000498219 GIMAP6Q6P9H5 292 aa17.59■□□□□ 0.41
HPS1-214ENST00000498219 OTOP1Q7RTM1 612 aa17.59■□□□□ 0.41
HPS1-214ENST00000498219 FEZ1Q99689 392 aa17.59■□□□□ 0.41
HPS1-214ENST00000498219 HELLSQ9NRZ9 838 aa17.59■□□□□ 0.41
HPS1-214ENST00000498219 EMILIN3Q9NT22 766 aa17.59■□□□□ 0.41
HPS1-214ENST00000498219 TMOD4Q9NZQ9 345 aa17.59■□□□□ 0.41
HPS1-214ENST00000498219 MGAMO43451 1857 aa17.58■□□□□ 0.41
HPS1-214ENST00000498219 ZNF589Q86UQ0 364 aaPredicted RBP17.58■□□□□ 0.4
HPS1-214ENST00000498219 NAPBQ9H115 298 aa17.58■□□□□ 0.4
HPS1-214ENST00000498219 SLC45A1Q9Y2W3 748 aa17.58■□□□□ 0.4
HPS1-214ENST00000498219 A0A1W2PRG0 241 aa17.57■□□□□ 0.4
HPS1-214ENST00000498219 C19orf81C9J6K1 198 aa17.57■□□□□ 0.4
HPS1-214ENST00000498219 PRDM1O75626 825 aa17.57■□□□□ 0.4
HPS1-214ENST00000498219 CTGFP29279 349 aa17.57■□□□□ 0.4
HPS1-214ENST00000498219 MCMDC2Q4G0Z9 681 aa17.57■□□□□ 0.4
HPS1-214ENST00000498219 USP17L2Q6R6M4 530 aa17.57■□□□□ 0.4
HPS1-214ENST00000498219 NACAP1Q9BZK3 213 aa17.57■□□□□ 0.4
HPS1-214ENST00000498219 EFCC1Q9HA90 598 aa17.57■□□□□ 0.4
HPS1-214ENST00000498219 DOCK3Q8IZD9 2030 aa17.56■□□□□ 0.4
HPS1-214ENST00000498219 CCDC85CA6NKD9 419 aa17.56■□□□□ 0.4
HPS1-214ENST00000498219 PEX10O60683 326 aa17.56■□□□□ 0.4
HPS1-214ENST00000498219 BCRP11274 1271 aa17.56■□□□□ 0.4
HPS1-214ENST00000498219 LACTBP83111 547 aaPredicted RBP17.56■□□□□ 0.4
HPS1-214ENST00000498219 TMEM179Q6ZVK1 233 aa17.56■□□□□ 0.4
HPS1-214ENST00000498219 SMCR8Q8TEV9 937 aaPredicted RBP17.56■□□□□ 0.4
HPS1-214ENST00000498219 ASCC2Q9H1I8 757 aaPredicted RBP17.56■□□□□ 0.4
HPS1-214ENST00000498219 MKNK2Q9HBH9 465 aa17.56■□□□□ 0.4
HPS1-214ENST00000498219 GREB1LQ9C091 1923 aaPredicted RBP17.56■□□□□ 0.4
HPS1-214ENST00000498219 ROBO3Q96MS0 1386 aa17.55■□□□□ 0.4
HPS1-214ENST00000498219 RASA1P20936 1047 aa17.55■□□□□ 0.4
HPS1-214ENST00000498219 OSBPP22059 807 aa17.55■□□□□ 0.4
HPS1-214ENST00000498219 ATP2B2Q01814 1243 aa17.55■□□□□ 0.4
HPS1-214ENST00000498219 CTDSPL2Q05D32 466 aa17.55■□□□□ 0.4
HPS1-214ENST00000498219 CWC27Q6UX04 472 aaKnown RBP17.55■□□□□ 0.4
HPS1-214ENST00000498219 SIAH1Q8IUQ4 282 aa17.55■□□□□ 0.4
HPS1-214ENST00000498219 ANKRD13CQ8N6S4 541 aa17.55■□□□□ 0.4
HPS1-214ENST00000498219 P2RX7Q99572 595 aaKnown RBP17.55■□□□□ 0.4
HPS1-214ENST00000498219 INCENPQ9NQS7 918 aa17.55■□□□□ 0.4
HPS1-214ENST00000498219 DIAPH3Q9NSV4 1193 aa17.55■□□□□ 0.4
HPS1-214ENST00000498219 PNMA3Q9UL41 463 aa17.55■□□□□ 0.4
HPS1-214ENST00000498219 HPS5Q9UPZ3 1129 aa17.55■□□□□ 0.4
HPS1-214ENST00000498219 CCDC171Q6TFL3 1326 aa17.54■□□□□ 0.4
HPS1-214ENST00000498219 IRX3P78415 501 aaPredicted RBP17.54■□□□□ 0.4
HPS1-214ENST00000498219 ICA1Q05084 483 aa17.54■□□□□ 0.4
HPS1-214ENST00000498219 PPARAQ07869 468 aa17.54■□□□□ 0.4
HPS1-214ENST00000498219 PABPC4Q13310 644 aaKnown RBP eCLIP17.54■□□□□ 0.44e-7■■■□□ 17.1
HPS1-214ENST00000498219 KIAA1755Q5JYT7 1200 aa17.54■□□□□ 0.4
HPS1-214ENST00000498219 FBXO46Q6PJ61 603 aaPredicted RBP17.54■□□□□ 0.4
HPS1-214ENST00000498219 CCDC17Q96LX7 622 aa17.54■□□□□ 0.4
HPS1-214ENST00000498219 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.54■□□□□ 0.4
HPS1-214ENST00000498219 KIAA1683Q9H0B3 1180 aa17.54■□□□□ 0.4
HPS1-214ENST00000498219 MYH4Q9Y623 1939 aa17.54■□□□□ 0.4
HPS1-214ENST00000498219 HSPD1P10809 573 aaKnown RBP17.53■□□□□ 0.4
HPS1-214ENST00000498219 PSMC4P43686 418 aa17.53■□□□□ 0.4
HPS1-214ENST00000498219 KIF22Q14807 665 aa17.53■□□□□ 0.4
HPS1-214ENST00000498219 PKN2Q16513 984 aaKnown RBP17.53■□□□□ 0.4
HPS1-214ENST00000498219 TRIM47Q96LD4 638 aa17.53■□□□□ 0.4
HPS1-214ENST00000498219 C12orf42Q96LP6 360 aa17.53■□□□□ 0.4
HPS1-214ENST00000498219 IL25Q9H293 177 aa17.53■□□□□ 0.4
HPS1-214ENST00000498219 TAOK2Q9UL54 1235 aa17.53■□□□□ 0.4
HPS1-214ENST00000498219 PTPN22Q9Y2R2 807 aa17.53■□□□□ 0.4
HPS1-214ENST00000498219 TACC3Q9Y6A5 838 aa17.53■□□□□ 0.4
HPS1-214ENST00000498219 FMNL1O95466 1100 aaPredicted RBP17.52■□□□□ 0.4
HPS1-214ENST00000498219 EEF2P13639 858 aaKnown RBP17.52■□□□□ 0.4
HPS1-214ENST00000498219 VCAM1P19320 739 aa17.52■□□□□ 0.4
HPS1-214ENST00000498219 CHMLP26374 656 aa17.52■□□□□ 0.4
HPS1-214ENST00000498219 HOXA7P31268 230 aaPredicted RBP17.52■□□□□ 0.4
HPS1-214ENST00000498219 USP14P54578 494 aa17.52■□□□□ 0.4
HPS1-214ENST00000498219 TICAM2Q86XR7 235 aa17.52■□□□□ 0.4
HPS1-214ENST00000498219 ARHGEF10LQ9HCE6 1279 aa17.52■□□□□ 0.4
HPS1-214ENST00000498219 HIP1O00291 1037 aa17.51■□□□□ 0.39
HPS1-214ENST00000498219 FGAP02671 866 aa17.51■□□□□ 0.39
HPS1-214ENST00000498219 HERVK_113P62684 666 aa17.51■□□□□ 0.39
HPS1-214ENST00000498219 BMP2KLQ5H9B9 411 aa17.51■□□□□ 0.39
HPS1-214ENST00000498219 FAM47AQ5JRC9 791 aa17.51■□□□□ 0.39
HPS1-214ENST00000498219 SPICE1Q8N0Z3 855 aa17.51■□□□□ 0.39
HPS1-214ENST00000498219 RPAP3Q9H6T3 665 aaPredicted RBP17.51■□□□□ 0.39
HPS1-214ENST00000498219 PTCH2Q9Y6C5 1203 aa17.51■□□□□ 0.39
HPS1-214ENST00000498219 USP17L15C9J2P7 530 aa17.5■□□□□ 0.39
HPS1-214ENST00000498219 USP17L13C9JLJ4 530 aa17.5■□□□□ 0.39
HPS1-214ENST00000498219 USP17L11C9JVI0 530 aa17.5■□□□□ 0.39
HPS1-214ENST00000498219 USP17L18D6R9N7 530 aa17.5■□□□□ 0.39
HPS1-214ENST00000498219 USP17L22D6RA61 530 aa17.5■□□□□ 0.39
HPS1-214ENST00000498219 USP17L17D6RBQ6 530 aa17.5■□□□□ 0.39
HPS1-214ENST00000498219 USP17L19D6RCP7 530 aa17.5■□□□□ 0.39
HPS1-214ENST00000498219 USP17L20D6RJB6 530 aa17.5■□□□□ 0.39
HPS1-214ENST00000498219 HAND2P61296 217 aa17.5■□□□□ 0.39
HPS1-214ENST00000498219 USP17L24Q0WX57 530 aa17.5■□□□□ 0.39
HPS1-214ENST00000498219 ALX1Q15699 326 aa17.5■□□□□ 0.39
HPS1-214ENST00000498219 POTEEQ6S8J3 1075 aa17.5■□□□□ 0.39
HPS1-214ENST00000498219 ZNF444Q8N0Y2 327 aaPredicted RBP17.5■□□□□ 0.39
HPS1-214ENST00000498219 TXNRD2Q9NNW7 524 aa17.5■□□□□ 0.39
HPS1-214ENST00000498219 RLFQ13129 1914 aa17.49■□□□□ 0.39
HPS1-214ENST00000498219 RAD21O60216 631 aa17.49■□□□□ 0.39
HPS1-214ENST00000498219 SLC3A2P08195 630 aaKnown RBP17.49■□□□□ 0.39
HPS1-214ENST00000498219 GCLCP48506 637 aaPredicted RBP17.49■□□□□ 0.39
HPS1-214ENST00000498219 PDE4BQ07343 736 aa17.49■□□□□ 0.39
HPS1-214ENST00000498219 ARHGEF6Q15052 776 aa17.49■□□□□ 0.39
HPS1-214ENST00000498219 CATSPERGQ6ZRH7 1159 aa17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms