RNA–Protein interactions for RNA: ENST00000498124.1

CDKN2A-208, Transcript of cyclin dependent kinase inhibitor 2A, humanhuman

TSL 1 (best) BASIC

Gene CDKN2A, Length 880 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2A-208ENST00000498124 TRIB2Q92519 343 aa27.31■■□□□ 1.96
CDKN2A-208ENST00000498124 KIAA1683Q9H0B3 1180 aa27.31■■□□□ 1.96
CDKN2A-208ENST00000498124 XRN2Q9H0D6 950 aaKnown RBP eCLIP27.31■■□□□ 1.96
CDKN2A-208ENST00000498124 BCL11AQ9H165 835 aa27.31■■□□□ 1.96
CDKN2A-208ENST00000498124 TRIOBPQ9H2D6 2365 aa27.31■■□□□ 1.96
CDKN2A-208ENST00000498124 ATP5JP18859 108 aa27.3■■□□□ 1.96
CDKN2A-208ENST00000498124 FEZ1Q99689 392 aa27.3■■□□□ 1.96
CDKN2A-208ENST00000498124 PORCNQ9H237 461 aa27.3■■□□□ 1.96
CDKN2A-208ENST00000498124 BOLA2Q9H3K6 86 aa27.3■■□□□ 1.96
CDKN2A-208ENST00000498124 DCP1AQ9NPI6 582 aaPredicted RBP27.3■■□□□ 1.96
CDKN2A-208ENST00000498124 PAG1Q9NWQ8 432 aa27.3■■□□□ 1.96
CDKN2A-208ENST00000498124 CNMDO75829 334 aa27.29■■□□□ 1.96
CDKN2A-208ENST00000498124 CHGBP05060 677 aa27.29■■□□□ 1.96
CDKN2A-208ENST00000498124 POLR3DP05423 398 aaPredicted RBP27.29■■□□□ 1.96
CDKN2A-208ENST00000498124 CYP2D6P10635 497 aa27.29■■□□□ 1.96
CDKN2A-208ENST00000498124 VCAM1P19320 739 aa27.29■■□□□ 1.96
CDKN2A-208ENST00000498124 GTF3C2Q8WUA4 911 aaPredicted RBP27.29■■□□□ 1.96
CDKN2A-208ENST00000498124 DPF3Q92784 378 aa27.29■■□□□ 1.96
CDKN2A-208ENST00000498124 MCM9Q9NXL9 1143 aa27.29■■□□□ 1.96
CDKN2A-208ENST00000498124 PCDH10Q9P2E7 1040 aa27.29■■□□□ 1.96
CDKN2A-208ENST00000498124 MYH7P12883 1935 aa27.28■■□□□ 1.96
CDKN2A-208ENST00000498124 ADD2P35612 726 aa27.28■■□□□ 1.96
CDKN2A-208ENST00000498124 FXR1P51114 621 aaKnown RBP eCLIP27.28■■□□□ 1.96
CDKN2A-208ENST00000498124 AAMPQ13685 434 aa27.28■■□□□ 1.96
CDKN2A-208ENST00000498124 USP6NLQ92738 828 aa27.28■■□□□ 1.96
CDKN2A-208ENST00000498124 HAUS7Q99871 368 aa27.28■■□□□ 1.96
CDKN2A-208ENST00000498124 PAGR1Q9BTK6 254 aa27.28■■□□□ 1.96
CDKN2A-208ENST00000498124 HTATIP2Q9BUP3 242 aa27.28■■□□□ 1.96
CDKN2A-208ENST00000498124 ARMT1Q9H993 441 aa27.28■■□□□ 1.96
CDKN2A-208ENST00000498124 ALPK3Q96L96 1907 aa27.28■■□□□ 1.96
CDKN2A-208ENST00000498124 TFRCP02786 760 aaKnown RBP27.27■■□□□ 1.96
CDKN2A-208ENST00000498124 CYP2B6P20813 491 aa27.27■■□□□ 1.96
CDKN2A-208ENST00000498124 USP14P54578 494 aa27.27■■□□□ 1.96
CDKN2A-208ENST00000498124 MAP3K21Q5TCX8 1036 aa27.27■■□□□ 1.96
CDKN2A-208ENST00000498124 SOCS4Q8WXH5 440 aa27.27■■□□□ 1.96
CDKN2A-208ENST00000498124 SZT2Q5T011 3432 aa27.26■■□□□ 1.96
CDKN2A-208ENST00000498124 BAZ2AQ9UIF9 1905 aaKnown RBP27.26■■□□□ 1.95
CDKN2A-208ENST00000498124 USP17L15C9J2P7 530 aa27.26■■□□□ 1.95
CDKN2A-208ENST00000498124 USP17L13C9JLJ4 530 aa27.26■■□□□ 1.95
CDKN2A-208ENST00000498124 USP17L11C9JVI0 530 aa27.26■■□□□ 1.95
CDKN2A-208ENST00000498124 USP17L18D6R9N7 530 aa27.26■■□□□ 1.95
CDKN2A-208ENST00000498124 USP17L22D6RA61 530 aa27.26■■□□□ 1.95
CDKN2A-208ENST00000498124 USP17L17D6RBQ6 530 aa27.26■■□□□ 1.95
CDKN2A-208ENST00000498124 USP17L19D6RCP7 530 aa27.26■■□□□ 1.95
CDKN2A-208ENST00000498124 USP17L20D6RJB6 530 aa27.26■■□□□ 1.95
CDKN2A-208ENST00000498124 CAPN2P17655 700 aa27.26■■□□□ 1.95
CDKN2A-208ENST00000498124 MAPK4P31152 587 aa27.26■■□□□ 1.95
CDKN2A-208ENST00000498124 USP17L24Q0WX57 530 aa27.26■■□□□ 1.95
CDKN2A-208ENST00000498124 SEPT2Q15019 361 aa27.26■■□□□ 1.95
CDKN2A-208ENST00000498124 CATSPERGQ6ZRH7 1159 aa27.26■■□□□ 1.95
CDKN2A-208ENST00000498124 SLC44A5Q8NCS7 719 aa27.26■■□□□ 1.95
CDKN2A-208ENST00000498124 CABP5Q9NP86 173 aa27.26■■□□□ 1.95
CDKN2A-208ENST00000498124 RPTORQ8N122 1335 aa27.25■■□□□ 1.95
CDKN2A-208ENST00000498124 A0A1W2PRG0 241 aa27.25■■□□□ 1.95
CDKN2A-208ENST00000498124 PRKAB2O43741 272 aa27.25■■□□□ 1.95
CDKN2A-208ENST00000498124 MBD4O95243 580 aa27.25■■□□□ 1.95
CDKN2A-208ENST00000498124 XRCC5P13010 732 aaKnown RBP27.25■■□□□ 1.95
CDKN2A-208ENST00000498124 MORN1Q5T089 497 aa27.25■■□□□ 1.95
CDKN2A-208ENST00000498124 GPR142Q7Z601 462 aa27.25■■□□□ 1.95
CDKN2A-208ENST00000498124 DIS3LQ8TF46 1054 aaKnown RBP27.25■■□□□ 1.95
CDKN2A-208ENST00000498124 NUDT12Q9BQG2 462 aa27.25■■□□□ 1.95
CDKN2A-208ENST00000498124 RABGAP1Q9Y3P9 1069 aa27.25■■□□□ 1.95
CDKN2A-208ENST00000498124 SMARCA5O60264 1052 aaPredicted RBP27.24■■□□□ 1.95
CDKN2A-208ENST00000498124 CHRDL2Q6WN34 429 aa27.24■■□□□ 1.95
CDKN2A-208ENST00000498124 A0A0G2JMZ2 1700 aa27.24■■□□□ 1.95
CDKN2A-208ENST00000498124 SMIM22K7EJ46 135 aa27.23■■□□□ 1.95
CDKN2A-208ENST00000498124 MNX1P50219 401 aaPredicted RBP27.23■■□□□ 1.95
CDKN2A-208ENST00000498124 LBX2Q6XYB7 198 aa27.23■■□□□ 1.95
CDKN2A-208ENST00000498124 DYNLL2Q96FJ2 89 aa27.23■■□□□ 1.95
CDKN2A-208ENST00000498124 LRRCC1Q9C099 1032 aa27.23■■□□□ 1.95
CDKN2A-208ENST00000498124 HMX1Q9NP08 348 aaPredicted RBP27.23■■□□□ 1.95
CDKN2A-208ENST00000498124 MYH8P13535 1937 aa27.23■■□□□ 1.95
CDKN2A-208ENST00000498124 RLFQ13129 1914 aa27.23■■□□□ 1.95
CDKN2A-208ENST00000498124 SPDYE16A6NNV3 312 aaPredicted RBP27.22■■□□□ 1.95
CDKN2A-208ENST00000498124 PRKAR2AP13861 404 aaKnown RBP27.22■■□□□ 1.95
CDKN2A-208ENST00000498124 PLEKHH3Q7Z736 793 aa27.22■■□□□ 1.95
CDKN2A-208ENST00000498124 PAWRQ96IZ0 340 aaKnown RBP27.22■■□□□ 1.95
CDKN2A-208ENST00000498124 PRO3102Q9H379 93 aa27.22■■□□□ 1.95
CDKN2A-208ENST00000498124 RPAP3Q9H6T3 665 aaPredicted RBP27.22■■□□□ 1.95
CDKN2A-208ENST00000498124 BTBD7Q9P203 1132 aa27.22■■□□□ 1.95
CDKN2A-208ENST00000498124 UBE3CQ15386 1083 aa27.21■■□□□ 1.95
CDKN2A-208ENST00000498124 CCL14Q16627 93 aa27.21■■□□□ 1.95
CDKN2A-208ENST00000498124 DDX24Q9GZR7 859 aaKnown RBP eCLIP27.21■■□□□ 1.95
CDKN2A-208ENST00000498124 CYP2D7A0A087X1C5 515 aa27.2■■□□□ 1.94
CDKN2A-208ENST00000498124 MPHOSPH10O00566 681 aaKnown RBP27.2■■□□□ 1.94
CDKN2A-208ENST00000498124 KIAA1755Q5JYT7 1200 aa27.2■■□□□ 1.94
CDKN2A-208ENST00000498124 ANKLE1Q8NAG6 615 aa27.2■■□□□ 1.94
CDKN2A-208ENST00000498124 EXOC6Q8TAG9 804 aa27.2■■□□□ 1.94
CDKN2A-208ENST00000498124 APBA2Q99767 749 aa27.2■■□□□ 1.94
CDKN2A-208ENST00000498124 ATP8A2Q9NTI2 1148 aa27.2■■□□□ 1.94
CDKN2A-208ENST00000498124 AKR1B1P15121 316 aa27.19■■□□□ 1.94
CDKN2A-208ENST00000498124 ZKSCAN1P17029 563 aaPredicted RBP27.19■■□□□ 1.94
CDKN2A-208ENST00000498124 RGS2P41220 211 aa27.19■■□□□ 1.94
CDKN2A-208ENST00000498124 CLEC10AQ8IUN9 316 aa27.19■■□□□ 1.94
CDKN2A-208ENST00000498124 SIAH1Q8IUQ4 282 aa27.19■■□□□ 1.94
CDKN2A-208ENST00000498124 RBM27Q9P2N5 1060 aaKnown RBP27.19■■□□□ 1.94
CDKN2A-208ENST00000498124 SWAP70Q9UH65 585 aa27.19■■□□□ 1.94
CDKN2A-208ENST00000498124 CACNB2Q08289 660 aaPredicted RBP27.18■■□□□ 1.94
CDKN2A-208ENST00000498124 C12orf60Q5U649 245 aa27.18■■□□□ 1.94
CDKN2A-208ENST00000498124 TMEM179Q6ZVK1 233 aa27.18■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms