RNA–Protein interactions for RNA: ENST00000498027.5

CAPN2-212, Transcript of calpain 2, humanhuman

TSL 2

Gene CAPN2, Length 1,405 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN2-212ENST00000498027 NBPF9Q3BBW0 867 aa17.98■□□□□ 0.47
CAPN2-212ENST00000498027 CSRNP1Q96S65 589 aa17.98■□□□□ 0.47
CAPN2-212ENST00000498027 FAM217BQ9NTX9 383 aaPredicted RBP17.98■□□□□ 0.47
CAPN2-212ENST00000498027 GPRC5DQ9NZD1 345 aa17.98■□□□□ 0.47
CAPN2-212ENST00000498027 CNTNAP1P78357 1384 aa17.97■□□□□ 0.47
CAPN2-212ENST00000498027 STK36Q9NRP7 1315 aa17.97■□□□□ 0.47
CAPN2-212ENST00000498027 ZC3H4Q9UPT8 1303 aaKnown RBP17.97■□□□□ 0.47
CAPN2-212ENST00000498027 DICER1Q9UPY3 1922 aaKnown RBP17.97■□□□□ 0.47
CAPN2-212ENST00000498027 IGKV6D-41A0A0C4DH26 115 aa17.97■□□□□ 0.47
CAPN2-212ENST00000498027 ZSCAN22P10073 491 aaPredicted RBP17.97■□□□□ 0.47
CAPN2-212ENST00000498027 TOP1P11387 765 aaKnown RBP17.97■□□□□ 0.47
CAPN2-212ENST00000498027 CDC27P30260 824 aa17.97■□□□□ 0.47
CAPN2-212ENST00000498027 KIF5BP33176 963 aa17.97■□□□□ 0.47
CAPN2-212ENST00000498027 PKP1Q13835 747 aa17.97■□□□□ 0.47
CAPN2-212ENST00000498027 NTRK3Q16288 839 aa17.97■□□□□ 0.47
CAPN2-212ENST00000498027 KIF4BQ2VIQ3 1234 aa17.97■□□□□ 0.47
CAPN2-212ENST00000498027 RAB11FIP4Q86YS3 637 aa17.97■□□□□ 0.47
CAPN2-212ENST00000498027 CTCFLQ8NI51 663 aaPredicted RBP17.97■□□□□ 0.47
CAPN2-212ENST00000498027 NUP133Q8WUM0 1156 aa17.97■□□□□ 0.47
CAPN2-212ENST00000498027 MYL10Q9BUA6 226 aa17.97■□□□□ 0.47
CAPN2-212ENST00000498027 SHTN1A0MZ66 631 aa17.96■□□□□ 0.47
CAPN2-212ENST00000498027 TBC1D12O60347 775 aa17.96■□□□□ 0.47
CAPN2-212ENST00000498027 AKR1B1P15121 316 aa17.96■□□□□ 0.47
CAPN2-212ENST00000498027 C9orf131Q5VYM1 1079 aa17.96■□□□□ 0.47
CAPN2-212ENST00000498027 PNMA1Q8ND90 353 aa17.96■□□□□ 0.47
CAPN2-212ENST00000498027 DDX11Q96FC9 970 aa17.96■□□□□ 0.47
CAPN2-212ENST00000498027 DNAJC18Q9H819 358 aa17.96■□□□□ 0.47
CAPN2-212ENST00000498027 MTMR4Q9NYA4 1195 aa17.96■□□□□ 0.47
CAPN2-212ENST00000498027 ORC3Q9UBD5 711 aaPredicted RBP17.96■□□□□ 0.47
CAPN2-212ENST00000498027 MTMR6Q9Y217 621 aa17.96■□□□□ 0.47
CAPN2-212ENST00000498027 ATP6V1DQ9Y5K8 247 aa17.96■□□□□ 0.47
CAPN2-212ENST00000498027 RXRAP19793 462 aa17.95■□□□□ 0.46
CAPN2-212ENST00000498027 GNAQP50148 359 aa17.95■□□□□ 0.46
CAPN2-212ENST00000498027 SSRP1Q08945 709 aaKnown RBP17.95■□□□□ 0.46
CAPN2-212ENST00000498027 NFKBIBQ15653 356 aa17.95■□□□□ 0.46
CAPN2-212ENST00000498027 GPR162Q16538 588 aa17.95■□□□□ 0.46
CAPN2-212ENST00000498027 CERKLQ49MI3 558 aaPredicted RBP17.95■□□□□ 0.46
CAPN2-212ENST00000498027 RBM26Q5T8P6 1007 aaKnown RBP17.95■□□□□ 0.46
CAPN2-212ENST00000498027 CCDC144CPQ8IYA2 1237 aa17.95■□□□□ 0.46
CAPN2-212ENST00000498027 TRIM22Q8IYM9 498 aa17.95■□□□□ 0.46
CAPN2-212ENST00000498027 WASF1Q92558 559 aa17.95■□□□□ 0.46
CAPN2-212ENST00000498027 CEP95Q96GE4 821 aa17.95■□□□□ 0.46
CAPN2-212ENST00000498027 TMEM47Q9BQJ4 181 aa17.95■□□□□ 0.46
CAPN2-212ENST00000498027 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.95■□□□□ 0.46
CAPN2-212ENST00000498027 STX8Q9UNK0 236 aa17.95■□□□□ 0.46
CAPN2-212ENST00000498027 FMNL1O95466 1100 aaPredicted RBP17.94■□□□□ 0.46
CAPN2-212ENST00000498027 FDPSP14324 419 aaKnown RBP17.94■□□□□ 0.46
CAPN2-212ENST00000498027 TBC1D10BQ4KMP7 808 aaPredicted RBP17.94■□□□□ 0.46
CAPN2-212ENST00000498027 SAMD7Q7Z3H4 446 aa17.94■□□□□ 0.46
CAPN2-212ENST00000498027 H3BQV1 296 aa17.93■□□□□ 0.46
CAPN2-212ENST00000498027 TTLL1O95922 423 aa17.93■□□□□ 0.46
CAPN2-212ENST00000498027 F13A1P00488 732 aa17.93■□□□□ 0.46
CAPN2-212ENST00000498027 PTMSP20962 102 aa17.93■□□□□ 0.46
CAPN2-212ENST00000498027 LMOD1P29536 600 aaPredicted RBP17.93■□□□□ 0.46
CAPN2-212ENST00000498027 MAP3K10Q02779 954 aa17.93■□□□□ 0.46
CAPN2-212ENST00000498027 IFFO2Q5TF58 517 aa17.93■□□□□ 0.46
CAPN2-212ENST00000498027 TMEM179Q6ZVK1 233 aa17.93■□□□□ 0.46
CAPN2-212ENST00000498027 APOBEC3FQ8IUX4 373 aaKnown RBP17.93■□□□□ 0.46
CAPN2-212ENST00000498027 LZTS2Q9BRK4 669 aa17.93■□□□□ 0.46
CAPN2-212ENST00000498027 KANSL2Q9H9L4 492 aa17.93■□□□□ 0.46
CAPN2-212ENST00000498027 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.93■□□□□ 0.46
CAPN2-212ENST00000498027 PGAP2Q9UHJ9 254 aa17.93■□□□□ 0.46
CAPN2-212ENST00000498027 SBF1O95248 1867 aa17.92■□□□□ 0.46
CAPN2-212ENST00000498027 VPS37CA5D8V6 355 aaPredicted RBP17.92■□□□□ 0.46
CAPN2-212ENST00000498027 MPHOSPH10O00566 681 aaKnown RBP17.92■□□□□ 0.46
CAPN2-212ENST00000498027 SOCS7O14512 581 aa17.92■□□□□ 0.46
CAPN2-212ENST00000498027 MCM4P33991 863 aa17.92■□□□□ 0.46
CAPN2-212ENST00000498027 RASA3Q14644 834 aa17.92■□□□□ 0.46
CAPN2-212ENST00000498027 GRM4Q14833 912 aa17.92■□□□□ 0.46
CAPN2-212ENST00000498027 DPY19L2Q6NUT2 758 aa17.92■□□□□ 0.46
CAPN2-212ENST00000498027 TMTC3Q6ZXV5 915 aa17.92■□□□□ 0.46
CAPN2-212ENST00000498027 HOOK2Q96ED9 719 aa17.92■□□□□ 0.46
CAPN2-212ENST00000498027 RNF26Q9BY78 433 aaPredicted RBP17.92■□□□□ 0.46
CAPN2-212ENST00000498027 RBM27Q9P2N5 1060 aaKnown RBP17.92■□□□□ 0.46
CAPN2-212ENST00000498027 DDX11L8A8MPP1 907 aa17.91■□□□□ 0.46
CAPN2-212ENST00000498027 GOLGA6L22H0YM25 854 aa17.91■□□□□ 0.46
CAPN2-212ENST00000498027 BAG4O95429 457 aaKnown RBP17.91■□□□□ 0.46
CAPN2-212ENST00000498027 EGFRP00533 1210 aa17.91■□□□□ 0.46
CAPN2-212ENST00000498027 ABCB5Q2M3G0 1257 aa17.91■□□□□ 0.46
CAPN2-212ENST00000498027 TMEM39BQ9GZU3 492 aa17.91■□□□□ 0.46
CAPN2-212ENST00000498027 CABP5Q9NP86 173 aa17.91■□□□□ 0.46
CAPN2-212ENST00000498027 NYAP2Q9P242 653 aa17.91■□□□□ 0.46
CAPN2-212ENST00000498027 HACL1Q9UJ83 578 aa17.91■□□□□ 0.46
CAPN2-212ENST00000498027 SIPA1L1O43166 1804 aa17.91■□□□□ 0.46
CAPN2-212ENST00000498027 DEXIO95424 95 aa17.9■□□□□ 0.46
CAPN2-212ENST00000498027 AKAP17AQ02040 695 aaKnown RBP17.9■□□□□ 0.46
CAPN2-212ENST00000498027 NBPF11Q86T75 865 aa17.9■□□□□ 0.46
CAPN2-212ENST00000498027 PHKBQ93100 1093 aa17.9■□□□□ 0.46
CAPN2-212ENST00000498027 MKL1Q969V6 931 aa17.9■□□□□ 0.46
CAPN2-212ENST00000498027 C8orf76Q96K31 380 aa17.9■□□□□ 0.46
CAPN2-212ENST00000498027 SLC26A6Q9BXS9 759 aa17.9■□□□□ 0.46
CAPN2-212ENST00000498027 ZSCAN16Q9H4T2 348 aaPredicted RBP17.9■□□□□ 0.46
CAPN2-212ENST00000498027 ADARB2Q9NS39 739 aaKnown RBP17.9■□□□□ 0.46
CAPN2-212ENST00000498027 SYNPO2Q9UMS6 1093 aa17.9■□□□□ 0.46
CAPN2-212ENST00000498027 PPP2R3BQ9Y5P8 575 aa17.9■□□□□ 0.46
CAPN2-212ENST00000498027 FAM196BA6NMK8 535 aa17.89■□□□□ 0.46
CAPN2-212ENST00000498027 PRPF3O43395 683 aaKnown RBP17.89■□□□□ 0.46
CAPN2-212ENST00000498027 DTNBO60941 627 aa17.89■□□□□ 0.46
CAPN2-212ENST00000498027 DDNO94850 711 aaPredicted RBP17.89■□□□□ 0.46
CAPN2-212ENST00000498027 SMARCA1P28370 1054 aa17.89■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms