RNA–Protein interactions for RNA: ENST00000497611.1

CDC7-205, Transcript of cell division cycle 7, humanhuman

TSL 3

Gene CDC7, Length 729 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC7-205ENST00000497611 MPHOSPH10O00566 681 aaKnown RBP16.74■□□□□ 0.27
CDC7-205ENST00000497611 TRIM32Q13049 653 aa16.74■□□□□ 0.27
CDC7-205ENST00000497611 NKX2-3Q8TAU0 364 aa16.74■□□□□ 0.27
CDC7-205ENST00000497611 C12orf42Q96LP6 360 aa16.74■□□□□ 0.27
CDC7-205ENST00000497611 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.74■□□□□ 0.27
CDC7-205ENST00000497611 PUS7LQ9H0K6 701 aaKnown RBP16.74■□□□□ 0.27
CDC7-205ENST00000497611 PORCNQ9H237 461 aa16.74■□□□□ 0.27
CDC7-205ENST00000497611 PCDHB15Q9Y5E8 787 aa16.74■□□□□ 0.27
CDC7-205ENST00000497611 A0A1W2PRG0 241 aa16.73■□□□□ 0.27
CDC7-205ENST00000497611 SGPL1O95470 568 aa16.73■□□□□ 0.27
CDC7-205ENST00000497611 CYP2B6P20813 491 aa16.73■□□□□ 0.27
CDC7-205ENST00000497611 ERVK-9P63128 1117 aa16.73■□□□□ 0.27
CDC7-205ENST00000497611 ERVK-24P63145 666 aa16.73■□□□□ 0.27
CDC7-205ENST00000497611 UBE3CQ15386 1083 aa16.73■□□□□ 0.27
CDC7-205ENST00000497611 CATSPERGQ6ZRH7 1159 aa16.73■□□□□ 0.27
CDC7-205ENST00000497611 DEFB118Q96PH6 123 aa16.73■□□□□ 0.27
CDC7-205ENST00000497611 KIAA1683Q9H0B3 1180 aa16.73■□□□□ 0.27
CDC7-205ENST00000497611 ECHDC1Q9NTX5 307 aa16.73■□□□□ 0.27
CDC7-205ENST00000497611 USP17L15C9J2P7 530 aa16.72■□□□□ 0.27
CDC7-205ENST00000497611 USP17L13C9JLJ4 530 aa16.72■□□□□ 0.27
CDC7-205ENST00000497611 USP17L12C9JPN9 530 aa16.72■□□□□ 0.27
CDC7-205ENST00000497611 USP17L11C9JVI0 530 aa16.72■□□□□ 0.27
CDC7-205ENST00000497611 USP17L21D6R901 530 aa16.72■□□□□ 0.27
CDC7-205ENST00000497611 USP17L18D6R9N7 530 aa16.72■□□□□ 0.27
CDC7-205ENST00000497611 USP17L22D6RA61 530 aa16.72■□□□□ 0.27
CDC7-205ENST00000497611 USP17L17D6RBQ6 530 aa16.72■□□□□ 0.27
CDC7-205ENST00000497611 USP17L19D6RCP7 530 aa16.72■□□□□ 0.27
CDC7-205ENST00000497611 USP17L20D6RJB6 530 aa16.72■□□□□ 0.27
CDC7-205ENST00000497611 CNMDO75829 334 aa16.72■□□□□ 0.27
CDC7-205ENST00000497611 VCAM1P19320 739 aa16.72■□□□□ 0.27
CDC7-205ENST00000497611 USP17L24Q0WX57 530 aa16.72■□□□□ 0.27
CDC7-205ENST00000497611 UBE2Q1Q7Z7E8 422 aa16.72■□□□□ 0.27
CDC7-205ENST00000497611 ATP8A2Q9NTI2 1148 aa16.72■□□□□ 0.27
CDC7-205ENST00000497611 SLC4A4Q9Y6R1 1079 aa16.72■□□□□ 0.27
CDC7-205ENST00000497611 DDX60LQ5H9U9 1706 aaKnown RBP16.71■□□□□ 0.27
CDC7-205ENST00000497611 DOCK3Q8IZD9 2030 aa16.71■□□□□ 0.27
CDC7-205ENST00000497611 TFRCP02786 760 aaKnown RBP16.71■□□□□ 0.27
CDC7-205ENST00000497611 AKR1B1P15121 316 aa16.71■□□□□ 0.27
CDC7-205ENST00000497611 USP14P54578 494 aa16.71■□□□□ 0.27
CDC7-205ENST00000497611 KIAA1755Q5JYT7 1200 aa16.71■□□□□ 0.27
CDC7-205ENST00000497611 C12orf60Q5U649 245 aa16.71■□□□□ 0.27
CDC7-205ENST00000497611 CLEC10AQ8IUN9 316 aa16.71■□□□□ 0.27
CDC7-205ENST00000497611 RPAP3Q9H6T3 665 aaPredicted RBP16.71■□□□□ 0.27
CDC7-205ENST00000497611 H0YGN5 161 aa16.7■□□□□ 0.26
CDC7-205ENST00000497611 HMGCRP04035 888 aa16.7■□□□□ 0.26
CDC7-205ENST00000497611 CDK8P49336 464 aa16.7■□□□□ 0.26
CDC7-205ENST00000497611 ZSCAN25Q6NSZ9 544 aa16.7■□□□□ 0.26
CDC7-205ENST00000497611 SIAH1Q8IUQ4 282 aa16.7■□□□□ 0.26
CDC7-205ENST00000497611 CCAR1Q8IX12 1150 aaKnown RBP16.7■□□□□ 0.26
CDC7-205ENST00000497611 DPF3Q92784 378 aa16.7■□□□□ 0.26
CDC7-205ENST00000497611 PAK6Q9NQU5 681 aaPredicted RBP16.7■□□□□ 0.26
CDC7-205ENST00000497611 SWAP70Q9UH65 585 aa16.7■□□□□ 0.26
CDC7-205ENST00000497611 NAV1Q8NEY1 1877 aa16.69■□□□□ 0.26
CDC7-205ENST00000497611 MAPK4P31152 587 aa16.69■□□□□ 0.26
CDC7-205ENST00000497611 CTR9Q6PD62 1173 aa16.69■□□□□ 0.26
CDC7-205ENST00000497611 GPR142Q7Z601 462 aa16.69■□□□□ 0.26
CDC7-205ENST00000497611 OTUD7AQ8TE49 926 aaPredicted RBP16.69■□□□□ 0.26
CDC7-205ENST00000497611 TRIB2Q92519 343 aa16.69■□□□□ 0.26
CDC7-205ENST00000497611 OSBP2Q969R2 916 aa16.69■□□□□ 0.26
CDC7-205ENST00000497611 NUDT12Q9BQG2 462 aa16.69■□□□□ 0.26
CDC7-205ENST00000497611 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.69■□□□□ 0.261e-6■□□□□ 8.4
CDC7-205ENST00000497611 BTBD7Q9P203 1132 aa16.69■□□□□ 0.26
CDC7-205ENST00000497611 RABGAP1Q9Y3P9 1069 aa16.69■□□□□ 0.26
CDC7-205ENST00000497611 FARP2O94887 1054 aaPredicted RBP16.68■□□□□ 0.26
CDC7-205ENST00000497611 RRP1P56182 461 aaKnown RBP16.68■□□□□ 0.26
CDC7-205ENST00000497611 CCL14Q16627 93 aa16.68■□□□□ 0.26
CDC7-205ENST00000497611 MORN1Q5T089 497 aa16.68■□□□□ 0.26
CDC7-205ENST00000497611 TMEM179Q6ZVK1 233 aa16.68■□□□□ 0.26
CDC7-205ENST00000497611 PLEKHH3Q7Z736 793 aa16.68■□□□□ 0.26
CDC7-205ENST00000497611 STK11IPQ8N1F8 1099 aa16.68■□□□□ 0.26
CDC7-205ENST00000497611 KBTBD3Q8NAB2 608 aa16.68■□□□□ 0.26
CDC7-205ENST00000497611 GTF3C2Q8WUA4 911 aaPredicted RBP16.68■□□□□ 0.26
CDC7-205ENST00000497611 USP6NLQ92738 828 aa16.68■□□□□ 0.26
CDC7-205ENST00000497611 STRBPQ96SI9 672 aaKnown RBP16.68■□□□□ 0.26
CDC7-205ENST00000497611 SPDYE16A6NNV3 312 aaPredicted RBP16.67■□□□□ 0.26
CDC7-205ENST00000497611 HABP4Q5JVS0 413 aaKnown RBP16.67■□□□□ 0.26
CDC7-205ENST00000497611 WDR78Q5VTH9 848 aa16.67■□□□□ 0.26
CDC7-205ENST00000497611 C16orf86Q6ZW13 317 aa16.67■□□□□ 0.26
CDC7-205ENST00000497611 GCC1Q96CN9 775 aa16.67■□□□□ 0.26
CDC7-205ENST00000497611 GPATCH3Q96I76 525 aa16.67■□□□□ 0.26
CDC7-205ENST00000497611 YTHDC1Q96MU7 727 aaKnown RBP16.67■□□□□ 0.26
CDC7-205ENST00000497611 CRBNQ96SW2 442 aa16.67■□□□□ 0.26
CDC7-205ENST00000497611 CRISPLD2Q9H0B8 497 aa16.67■□□□□ 0.26
CDC7-205ENST00000497611 HMX1Q9NP08 348 aaPredicted RBP16.67■□□□□ 0.26
CDC7-205ENST00000497611 RPTORQ8N122 1335 aa16.67■□□□□ 0.26
CDC7-205ENST00000497611 PLXNB2O15031 1838 aa16.66■□□□□ 0.26
CDC7-205ENST00000497611 GSG1L2A8MUP6 293 aa16.66■□□□□ 0.26
CDC7-205ENST00000497611 RNF113AO15541 343 aaKnown RBP16.66■□□□□ 0.26
CDC7-205ENST00000497611 AMOTL1Q8IY63 956 aa16.66■□□□□ 0.26
CDC7-205ENST00000497611 SPICE1Q8N0Z3 855 aa16.66■□□□□ 0.26
CDC7-205ENST00000497611 DIS3LQ8TF46 1054 aaKnown RBP16.66■□□□□ 0.26
CDC7-205ENST00000497611 SOCS4Q8WXH5 440 aa16.66■□□□□ 0.26
CDC7-205ENST00000497611 DDRGK1Q96HY6 314 aa16.66■□□□□ 0.26
CDC7-205ENST00000497611 PAWRQ96IZ0 340 aaKnown RBP16.66■□□□□ 0.26
CDC7-205ENST00000497611 CWC22Q9HCG8 908 aaKnown RBP16.66■□□□□ 0.26
CDC7-205ENST00000497611 COLQQ9Y215 455 aaPredicted RBP16.66■□□□□ 0.26
CDC7-205ENST00000497611 XRCC5P13010 732 aaKnown RBP16.65■□□□□ 0.26
CDC7-205ENST00000497611 PRKAR2AP13861 404 aaKnown RBP16.65■□□□□ 0.26
CDC7-205ENST00000497611 ICA1Q05084 483 aa16.65■□□□□ 0.26
CDC7-205ENST00000497611 COG2Q14746 738 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 139.6 ms