RNA–Protein interactions for RNA: ENST00000497564.5

VPS26A-209, Transcript of VPS26, retromer complex component A, humanhuman

TSL 5

Gene VPS26A, Length 462 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-209ENST00000497564 SUPT20HL1Q3ZLR7 823 aa16.66■□□□□ 0.26
VPS26A-209ENST00000497564 RRP12Q5JTH9 1297 aaKnown RBP16.66■□□□□ 0.26
VPS26A-209ENST00000497564 POTEDQ86YR6 584 aa16.66■□□□□ 0.26
VPS26A-209ENST00000497564 TOMM22Q9NS69 142 aa16.66■□□□□ 0.26
VPS26A-209ENST00000497564 SWAP70Q9UH65 585 aa16.66■□□□□ 0.26
VPS26A-209ENST00000497564 OTOFQ9HC10 1997 aa16.66■□□□□ 0.26
VPS26A-209ENST00000497564 PFKFB2O60825 505 aa16.65■□□□□ 0.26
VPS26A-209ENST00000497564 CDK8P49336 464 aa16.65■□□□□ 0.26
VPS26A-209ENST00000497564 APOBRQ0VD83 1088 aa16.65■□□□□ 0.26
VPS26A-209ENST00000497564 MAP3K11Q16584 847 aa16.65■□□□□ 0.26
VPS26A-209ENST00000497564 TMEM67Q5HYA8 995 aa16.65■□□□□ 0.26
VPS26A-209ENST00000497564 FAM83AQ86UY5 434 aa16.65■□□□□ 0.26
VPS26A-209ENST00000497564 METTL16Q86W50 562 aaKnown RBP16.65■□□□□ 0.26
VPS26A-209ENST00000497564 STK11IPQ8N1F8 1099 aa16.65■□□□□ 0.26
VPS26A-209ENST00000497564 TMTC2Q8N394 836 aa16.65■□□□□ 0.26
VPS26A-209ENST00000497564 GTF3C6Q969F1 213 aa16.65■□□□□ 0.26
VPS26A-209ENST00000497564 DYNLL2Q96FJ2 89 aa16.65■□□□□ 0.26
VPS26A-209ENST00000497564 BEGAINQ9BUH8 593 aa16.65■□□□□ 0.26
VPS26A-209ENST00000497564 LY9Q9HBG7 655 aa16.65■□□□□ 0.26
VPS26A-209ENST00000497564 CWC22Q9HCG8 908 aaKnown RBP16.65■□□□□ 0.26
VPS26A-209ENST00000497564 NID2Q14112 1375 aa16.64■□□□□ 0.26
VPS26A-209ENST00000497564 PLIN4Q96Q06 1357 aa16.64■□□□□ 0.26
VPS26A-209ENST00000497564 IFIT3O14879 490 aaKnown RBP16.64■□□□□ 0.25
VPS26A-209ENST00000497564 PPP1R12BO60237 982 aaPredicted RBP16.64■□□□□ 0.25
VPS26A-209ENST00000497564 RANBP6O60518 1105 aaKnown RBP16.64■□□□□ 0.25
VPS26A-209ENST00000497564 PRDM1O75626 825 aa16.64■□□□□ 0.25
VPS26A-209ENST00000497564 RASA1P20936 1047 aa16.64■□□□□ 0.25
VPS26A-209ENST00000497564 ST3GAL1Q11201 340 aa16.64■□□□□ 0.25
VPS26A-209ENST00000497564 TCP10Q12799 353 aa16.64■□□□□ 0.25
VPS26A-209ENST00000497564 SEC23AQ15436 765 aa16.64■□□□□ 0.25
VPS26A-209ENST00000497564 CCDC178Q5BJE1 867 aa16.64■□□□□ 0.25
VPS26A-209ENST00000497564 IQCA1Q86XH1 822 aa16.64■□□□□ 0.25
VPS26A-209ENST00000497564 ZFPM1Q8IX07 1006 aa16.64■□□□□ 0.25
VPS26A-209ENST00000497564 FAM151AQ8WW52 585 aa16.64■□□□□ 0.25
VPS26A-209ENST00000497564 CHMP4CQ96CF2 233 aa16.64■□□□□ 0.25
VPS26A-209ENST00000497564 LARP6Q9BRS8 491 aaKnown RBP16.64■□□□□ 0.25
VPS26A-209ENST00000497564 MKNK2Q9HBH9 465 aa16.64■□□□□ 0.25
VPS26A-209ENST00000497564 GPHNQ9NQX3 736 aaPredicted RBP16.64■□□□□ 0.25
VPS26A-209ENST00000497564 TCP11L1Q9NUJ3 509 aa16.64■□□□□ 0.25
VPS26A-209ENST00000497564 SERPINB13Q9UIV8 391 aa16.64■□□□□ 0.25
VPS26A-209ENST00000497564 CIZ1Q9ULV3 898 aaPredicted RBP16.64■□□□□ 0.25
VPS26A-209ENST00000497564 ERICH2A1L162 156 aa16.63■□□□□ 0.25
VPS26A-209ENST00000497564 PDIA3P30101 505 aaKnown RBP16.63■□□□□ 0.25
VPS26A-209ENST00000497564 TNNI2P48788 182 aa16.63■□□□□ 0.25
VPS26A-209ENST00000497564 RCAN1P53805 252 aa16.63■□□□□ 0.25
VPS26A-209ENST00000497564 WTAPQ15007 396 aa16.63■□□□□ 0.25
VPS26A-209ENST00000497564 SLC4A8Q2Y0W8 1093 aa16.63■□□□□ 0.25
VPS26A-209ENST00000497564 SH3BP5LQ7L8J4 393 aa16.63■□□□□ 0.25
VPS26A-209ENST00000497564 ZSCAN10Q96SZ4 725 aaPredicted RBP16.63■□□□□ 0.25
VPS26A-209ENST00000497564 UBAC1Q9BSL1 405 aa16.63■□□□□ 0.25
VPS26A-209ENST00000497564 PRDM10Q9NQV6 1147 aa16.63■□□□□ 0.25
VPS26A-209ENST00000497564 PI4KBQ9UBF8 816 aa16.63■□□□□ 0.25
VPS26A-209ENST00000497564 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.63■□□□□ 0.25
VPS26A-209ENST00000497564 KLF18A0A0U1RQI7 1052 aa16.62■□□□□ 0.25
VPS26A-209ENST00000497564 DDTLA6NHG4 134 aaPredicted RBP16.62■□□□□ 0.25
VPS26A-209ENST00000497564 GJA5P36382 358 aa16.62■□□□□ 0.25
VPS26A-209ENST00000497564 SPRYD7Q5W111 196 aa16.62■□□□□ 0.25
VPS26A-209ENST00000497564 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.62■□□□□ 0.25
VPS26A-209ENST00000497564 FOXP4Q8IVH2 680 aaPredicted RBP16.62■□□□□ 0.25
VPS26A-209ENST00000497564 CCDC83Q8IWF9 413 aa16.62■□□□□ 0.25
VPS26A-209ENST00000497564 ZNF444Q8N0Y2 327 aaPredicted RBP16.62■□□□□ 0.25
VPS26A-209ENST00000497564 SPRYD3Q8NCJ5 442 aa16.62■□□□□ 0.25
VPS26A-209ENST00000497564 SLC44A5Q8NCS7 719 aa16.62■□□□□ 0.25
VPS26A-209ENST00000497564 CNKSR2Q8WXI2 1034 aa16.62■□□□□ 0.25
VPS26A-209ENST00000497564 ANKS1AQ92625 1134 aa16.62■□□□□ 0.25
VPS26A-209ENST00000497564 SLKQ9H2G2 1235 aaPredicted RBP16.62■□□□□ 0.25
VPS26A-209ENST00000497564 RNF186Q9NXI6 227 aa16.62■□□□□ 0.25
VPS26A-209ENST00000497564 BRPF3Q9ULD4 1205 aa16.62■□□□□ 0.25
VPS26A-209ENST00000497564 TNKSO95271 1327 aa16.62■□□□□ 0.25
VPS26A-209ENST00000497564 CASP8AP2Q9UKL3 1982 aa16.61■□□□□ 0.25
VPS26A-209ENST00000497564 TSPY2A6NKD2 308 aa16.61■□□□□ 0.25
VPS26A-209ENST00000497564 TRPA1O75762 1119 aa16.61■□□□□ 0.25
VPS26A-209ENST00000497564 SHMT1P34896 483 aa16.61■□□□□ 0.25
VPS26A-209ENST00000497564 IREB2P48200 963 aaKnown RBP16.61■□□□□ 0.25
VPS26A-209ENST00000497564 TFAP4Q01664 338 aa16.61■□□□□ 0.25
VPS26A-209ENST00000497564 APOA5Q6Q788 366 aa16.61■□□□□ 0.25
VPS26A-209ENST00000497564 TNS4Q8IZW8 715 aa16.61■□□□□ 0.25
VPS26A-209ENST00000497564 ENAHQ8N8S7 591 aaPredicted RBP16.61■□□□□ 0.25
VPS26A-209ENST00000497564 NEDD1Q8NHV4 660 aa16.61■□□□□ 0.25
VPS26A-209ENST00000497564 SLC10A4Q96EP9 437 aa16.61■□□□□ 0.25
VPS26A-209ENST00000497564 WNK4Q96J92 1243 aa16.61■□□□□ 0.25
VPS26A-209ENST00000497564 LLPHQ9BRT6 129 aaKnown RBP16.61■□□□□ 0.25
VPS26A-209ENST00000497564 CCDC69A6NI79 296 aa16.6■□□□□ 0.25
VPS26A-209ENST00000497564 TSPY3P0CV98 308 aa16.6■□□□□ 0.25
VPS26A-209ENST00000497564 TSPY8P0CW00 308 aa16.6■□□□□ 0.25
VPS26A-209ENST00000497564 SLURP2P0DP57 97 aa16.6■□□□□ 0.25
VPS26A-209ENST00000497564 SCRN1Q12765 414 aa16.6■□□□□ 0.25
VPS26A-209ENST00000497564 FAM47AQ5JRC9 791 aa16.6■□□□□ 0.25
VPS26A-209ENST00000497564 MIGA2Q7L4E1 593 aa16.6■□□□□ 0.25
VPS26A-209ENST00000497564 DGKHQ86XP1 1220 aa16.6■□□□□ 0.25
VPS26A-209ENST00000497564 NECAB1Q8N987 351 aa16.6■□□□□ 0.25
VPS26A-209ENST00000497564 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.6■□□□□ 0.25
VPS26A-209ENST00000497564 ZKSCAN3Q9BRR0 538 aa16.6■□□□□ 0.25
VPS26A-209ENST00000497564 ELP3Q9H9T3 547 aa16.6■□□□□ 0.25
VPS26A-209ENST00000497564 SENP2Q9HC62 589 aa16.6■□□□□ 0.25
VPS26A-209ENST00000497564 CHMP5Q9NZZ3 219 aa16.6■□□□□ 0.25
VPS26A-209ENST00000497564 HERC5Q9UII4 1024 aaKnown RBP16.6■□□□□ 0.25
VPS26A-209ENST00000497564 HPS5Q9UPZ3 1129 aa16.6■□□□□ 0.25
VPS26A-209ENST00000497564 MYH15Q9Y2K3 1946 aa16.59■□□□□ 0.25
VPS26A-209ENST00000497564 GOLGA8BA8MQT2 603 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms