RNA–Protein interactions for RNA: ENST00000497380.1

USP13-205, Transcript of ubiquitin specific peptidase 13, humanhuman

TSL 3

Gene USP13, Length 509 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP13-205ENST00000497380 SYNPO2Q9UMS6 1093 aa12.29□□□□□ -0.44
USP13-205ENST00000497380 STX8Q9UNK0 236 aa12.29□□□□□ -0.44
USP13-205ENST00000497380 CSADQ9Y600 493 aa12.29□□□□□ -0.44
USP13-205ENST00000497380 TNKSO95271 1327 aa12.29□□□□□ -0.44
USP13-205ENST00000497380 PHF20L1A8MW92 1017 aa12.28□□□□□ -0.44
USP13-205ENST00000497380 SH2B2O14492 632 aaPredicted RBP12.28□□□□□ -0.44
USP13-205ENST00000497380 GDF11O95390 407 aa12.28□□□□□ -0.44
USP13-205ENST00000497380 GH2P01242 217 aa12.28□□□□□ -0.44
USP13-205ENST00000497380 CALM1P0DP23 149 aa12.28□□□□□ -0.44
USP13-205ENST00000497380 CALM2P0DP24 149 aa12.28□□□□□ -0.44
USP13-205ENST00000497380 CALM3P0DP25 149 aa12.28□□□□□ -0.44
USP13-205ENST00000497380 CPA1P15085 419 aa12.28□□□□□ -0.44
USP13-205ENST00000497380 AK2P54819 239 aa12.28□□□□□ -0.44
USP13-205ENST00000497380 ANTXR2P58335 489 aa12.28□□□□□ -0.44
USP13-205ENST00000497380 RAB3GAP1Q15042 981 aa12.28□□□□□ -0.44
USP13-205ENST00000497380 NOL9Q5SY16 702 aaKnown RBP12.28□□□□□ -0.44
USP13-205ENST00000497380 SCYL3Q8IZE3 742 aa12.28□□□□□ -0.44
USP13-205ENST00000497380 ANKS1AQ92625 1134 aa12.28□□□□□ -0.44
USP13-205ENST00000497380 SNX21Q969T3 373 aa12.28□□□□□ -0.44
USP13-205ENST00000497380 ZKSCAN3Q9BRR0 538 aa12.28□□□□□ -0.44
USP13-205ENST00000497380 KAT14Q9H8E8 782 aa12.28□□□□□ -0.44
USP13-205ENST00000497380 MTMR4Q9NYA4 1195 aa12.28□□□□□ -0.44
USP13-205ENST00000497380 NYAP2Q9P242 653 aa12.28□□□□□ -0.44
USP13-205ENST00000497380 ZBTB21Q9ULJ3 1066 aa12.28□□□□□ -0.44
USP13-205ENST00000497380 MYH8P13535 1937 aa12.28□□□□□ -0.44
USP13-205ENST00000497380 SIPA1L1O43166 1804 aa12.27□□□□□ -0.44
USP13-205ENST00000497380 IGKV6D-41A0A0C4DH26 115 aa12.27□□□□□ -0.45
USP13-205ENST00000497380 USP17L5A8MUK1 530 aa12.27□□□□□ -0.45
USP13-205ENST00000497380 CELF2O95319 508 aaKnown RBP12.27□□□□□ -0.45
USP13-205ENST00000497380 ITGBL1O95965 494 aaPredicted RBP12.27□□□□□ -0.45
USP13-205ENST00000497380 TOP1P11387 765 aaKnown RBP12.27□□□□□ -0.45
USP13-205ENST00000497380 RCAN1P53805 252 aa12.27□□□□□ -0.45
USP13-205ENST00000497380 ICA1Q05084 483 aa12.27□□□□□ -0.45
USP13-205ENST00000497380 PRKG1Q13976 671 aa12.27□□□□□ -0.45
USP13-205ENST00000497380 SEPT2Q15019 361 aa12.27□□□□□ -0.45
USP13-205ENST00000497380 PPP2R5BQ15173 497 aa12.27□□□□□ -0.45
USP13-205ENST00000497380 CATIPQ7Z7H3 387 aa12.27□□□□□ -0.45
USP13-205ENST00000497380 SGMS1Q86VZ5 419 aa12.27□□□□□ -0.45
USP13-205ENST00000497380 HSCBQ8IWL3 235 aa12.27□□□□□ -0.45
USP13-205ENST00000497380 ENAHQ8N8S7 591 aaPredicted RBP12.27□□□□□ -0.45
USP13-205ENST00000497380 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.27□□□□□ -0.45
USP13-205ENST00000497380 BRF1Q92994 677 aa12.27□□□□□ -0.45
USP13-205ENST00000497380 MKL1Q969V6 931 aa12.27□□□□□ -0.45
USP13-205ENST00000497380 ZNF274Q96GC6 653 aaPredicted RBP12.27□□□□□ -0.45
USP13-205ENST00000497380 CEP95Q96GE4 821 aa12.27□□□□□ -0.45
USP13-205ENST00000497380 ZNF408Q9H9D4 720 aa12.27□□□□□ -0.45
USP13-205ENST00000497380 LY9Q9HBG7 655 aa12.27□□□□□ -0.45
USP13-205ENST00000497380 GBA2Q9HCG7 927 aaPredicted RBP12.27□□□□□ -0.45
USP13-205ENST00000497380 IL17RBQ9NRM6 502 aa12.27□□□□□ -0.45
USP13-205ENST00000497380 LIMCH1Q9UPQ0 1083 aa12.27□□□□□ -0.45
USP13-205ENST00000497380 RBM19Q9Y4C8 960 aaKnown RBP12.27□□□□□ -0.45
USP13-205ENST00000497380 SLC12A7Q9Y666 1083 aa12.27□□□□□ -0.45
USP13-205ENST00000497380 TRAF5O00463 557 aa12.26□□□□□ -0.45
USP13-205ENST00000497380 DHX16O60231 1041 aaKnown RBP12.26□□□□□ -0.45
USP13-205ENST00000497380 INPP5BP32019 993 aa12.26□□□□□ -0.45
USP13-205ENST00000497380 NOVP48745 357 aa12.26□□□□□ -0.45
USP13-205ENST00000497380 TOB2Q14106 344 aaPredicted RBP12.26□□□□□ -0.45
USP13-205ENST00000497380 SEC23AQ15436 765 aa12.26□□□□□ -0.45
USP13-205ENST00000497380 TCEANC2Q96MN5 208 aa12.26□□□□□ -0.45
USP13-205ENST00000497380 LRRC2Q9BYS8 371 aa12.26□□□□□ -0.45
USP13-205ENST00000497380 SH2B1Q9NRF2 756 aaPredicted RBP12.26□□□□□ -0.45
USP13-205ENST00000497380 CLIP2Q9UDT6 1046 aa12.26□□□□□ -0.45
USP13-205ENST00000497380 KLF18A0A0U1RQI7 1052 aa12.25□□□□□ -0.45
USP13-205ENST00000497380 CCDC196A0A1B0GTZ2 297 aa12.25□□□□□ -0.45
USP13-205ENST00000497380 SLURP2P0DP57 97 aa12.25□□□□□ -0.45
USP13-205ENST00000497380 EEF2P13639 858 aaKnown RBP12.25□□□□□ -0.45
USP13-205ENST00000497380 EVCP57679 992 aa12.25□□□□□ -0.45
USP13-205ENST00000497380 ATP2B2Q01814 1243 aa12.25□□□□□ -0.45
USP13-205ENST00000497380 PNMA1Q8ND90 353 aa12.25□□□□□ -0.45
USP13-205ENST00000497380 ZKSCAN4Q969J2 545 aaPredicted RBP12.25□□□□□ -0.45
USP13-205ENST00000497380 MAP3K14Q99558 947 aa12.25□□□□□ -0.45
USP13-205ENST00000497380 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.25□□□□□ -0.45
USP13-205ENST00000497380 GOPCQ9HD26 462 aa12.25□□□□□ -0.45
USP13-205ENST00000497380 DAXXQ9UER7 740 aaPredicted RBP12.25□□□□□ -0.45
USP13-205ENST00000497380 NAP1L2Q9ULW6 460 aaPredicted RBP12.25□□□□□ -0.45
USP13-205ENST00000497380 SSC5DA1L4H1 1573 aa12.25□□□□□ -0.45
USP13-205ENST00000497380 C19orf81C9J6K1 198 aa12.24□□□□□ -0.45
USP13-205ENST00000497380 K7ELQ4 463 aaPredicted RBP12.24□□□□□ -0.45
USP13-205ENST00000497380 ZBTB43O43298 467 aa12.24□□□□□ -0.45
USP13-205ENST00000497380 NMT2O60551 498 aa12.24□□□□□ -0.45
USP13-205ENST00000497380 DDAH1O94760 285 aa12.24□□□□□ -0.45
USP13-205ENST00000497380 PTPRAP18433 802 aa12.24□□□□□ -0.45
USP13-205ENST00000497380 KIF5BP33176 963 aa12.24□□□□□ -0.45
USP13-205ENST00000497380 USP14P54578 494 aa12.24□□□□□ -0.45
USP13-205ENST00000497380 APOBRQ0VD83 1088 aa12.24□□□□□ -0.45
USP13-205ENST00000497380 VGLL4Q14135 290 aa12.24□□□□□ -0.45
USP13-205ENST00000497380 RRP1BQ14684 758 aaKnown RBP12.24□□□□□ -0.45
USP13-205ENST00000497380 LDLRAD1Q5T700 205 aa12.24□□□□□ -0.45
USP13-205ENST00000497380 RCSD1Q6JBY9 416 aa12.24□□□□□ -0.45
USP13-205ENST00000497380 CPLX2Q6PUV4 134 aaKnown RBP12.24□□□□□ -0.45
USP13-205ENST00000497380 APOA5Q6Q788 366 aa12.24□□□□□ -0.45
USP13-205ENST00000497380 DLK2Q6UY11 383 aa12.24□□□□□ -0.45
USP13-205ENST00000497380 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.24□□□□□ -0.45
USP13-205ENST00000497380 ERO1BQ86YB8 467 aa12.24□□□□□ -0.45
USP13-205ENST00000497380 ZNF280CQ8ND82 737 aa12.24□□□□□ -0.45
USP13-205ENST00000497380 CTCFLQ8NI51 663 aaPredicted RBP12.24□□□□□ -0.45
USP13-205ENST00000497380 SLC10A4Q96EP9 437 aa12.24□□□□□ -0.45
USP13-205ENST00000497380 TMEM47Q9BQJ4 181 aa12.24□□□□□ -0.45
USP13-205ENST00000497380 WDR18Q9BV38 432 aa12.24□□□□□ -0.45
USP13-205ENST00000497380 SLKQ9H2G2 1235 aaPredicted RBP12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms