RNA–Protein interactions for RNA: ENST00000496882.5

SRRM1-220, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 5

Gene SRRM1, Length 834 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-220ENST00000496882 TRIM47Q96LD4 638 aa9.48□□□□□ -0.89
SRRM1-220ENST00000496882 ANTXR1Q9H6X2 564 aa9.48□□□□□ -0.89
SRRM1-220ENST00000496882 CABP5Q9NP86 173 aa9.48□□□□□ -0.89
SRRM1-220ENST00000496882 FRMD4AQ9P2Q2 1039 aaPredicted RBP9.48□□□□□ -0.89
SRRM1-220ENST00000496882 ADGRA2Q96PE1 1338 aa9.48□□□□□ -0.89
SRRM1-220ENST00000496882 C19orf81C9J6K1 198 aa9.47□□□□□ -0.89
SRRM1-220ENST00000496882 HAX1O00165 279 aa9.47□□□□□ -0.89
SRRM1-220ENST00000496882 TNPO2O14787 897 aaKnown RBP9.47□□□□□ -0.89
SRRM1-220ENST00000496882 GDF11O95390 407 aa9.47□□□□□ -0.89
SRRM1-220ENST00000496882 MYCP01106 439 aaPredicted RBP9.47□□□□□ -0.89
SRRM1-220ENST00000496882 BCRP11274 1271 aa9.47□□□□□ -0.89
SRRM1-220ENST00000496882 PDE6AP16499 860 aa9.47□□□□□ -0.89
SRRM1-220ENST00000496882 GRK4P32298 578 aa9.47□□□□□ -0.89
SRRM1-220ENST00000496882 GCLCP48506 637 aaPredicted RBP9.47□□□□□ -0.89
SRRM1-220ENST00000496882 IRX5P78411 483 aaPredicted RBP9.47□□□□□ -0.89
SRRM1-220ENST00000496882 MTMR2Q13614 643 aa9.47□□□□□ -0.89
SRRM1-220ENST00000496882 ZSCAN25Q6NSZ9 544 aa9.47□□□□□ -0.89
SRRM1-220ENST00000496882 SIRT2Q8IXJ6 389 aa9.47□□□□□ -0.89
SRRM1-220ENST00000496882 SH3TC2Q8TF17 1288 aa9.47□□□□□ -0.89
SRRM1-220ENST00000496882 COA7Q96BR5 231 aa9.47□□□□□ -0.89
SRRM1-220ENST00000496882 FEZ1Q99689 392 aa9.47□□□□□ -0.89
SRRM1-220ENST00000496882 WDR18Q9BV38 432 aa9.47□□□□□ -0.89
SRRM1-220ENST00000496882 BOLA2Q9H3K6 86 aa9.47□□□□□ -0.89
SRRM1-220ENST00000496882 PAG1Q9NWQ8 432 aa9.47□□□□□ -0.89
SRRM1-220ENST00000496882 SERPINB13Q9UIV8 391 aa9.47□□□□□ -0.89
SRRM1-220ENST00000496882 ZNF532Q9HCE3 1301 aa9.47□□□□□ -0.89
SRRM1-220ENST00000496882 POTEFA5A3E0 1075 aa9.46□□□□□ -0.9
SRRM1-220ENST00000496882 USP17L10C9JJH3 530 aa9.46□□□□□ -0.9
SRRM1-220ENST00000496882 ATP5JP18859 108 aa9.46□□□□□ -0.9
SRRM1-220ENST00000496882 ATN1P54259 1190 aaPredicted RBP9.46□□□□□ -0.9
SRRM1-220ENST00000496882 BACE1P56817 501 aa9.46□□□□□ -0.9
SRRM1-220ENST00000496882 CAP1Q01518 475 aa9.46□□□□□ -0.9
SRRM1-220ENST00000496882 FAM110CQ1W6H9 321 aa9.46□□□□□ -0.9
SRRM1-220ENST00000496882 CERKLQ49MI3 558 aaPredicted RBP9.46□□□□□ -0.9
SRRM1-220ENST00000496882 SH3D19Q5HYK7 790 aa9.46□□□□□ -0.9
SRRM1-220ENST00000496882 TREML2Q5T2D2 321 aa9.46□□□□□ -0.9
SRRM1-220ENST00000496882 IER5LQ5T953 404 aa9.46□□□□□ -0.9
SRRM1-220ENST00000496882 C20orf194Q5TEA3 1177 aa9.46□□□□□ -0.9
SRRM1-220ENST00000496882 METTL16Q86W50 562 aaKnown RBP9.46□□□□□ -0.9
SRRM1-220ENST00000496882 CCAR1Q8IX12 1150 aaKnown RBP9.46□□□□□ -0.9
SRRM1-220ENST00000496882 ANKRD13CQ8N6S4 541 aa9.46□□□□□ -0.9
SRRM1-220ENST00000496882 SLAIN1Q8ND83 568 aa9.46□□□□□ -0.9
SRRM1-220ENST00000496882 NKX2-3Q8TAU0 364 aa9.46□□□□□ -0.9
SRRM1-220ENST00000496882 FAM117AQ9C073 453 aa9.46□□□□□ -0.9
SRRM1-220ENST00000496882 ZMYND15Q9H091 742 aa9.46□□□□□ -0.9
SRRM1-220ENST00000496882 EHD4Q9H223 541 aa9.46□□□□□ -0.9
SRRM1-220ENST00000496882 CWC22Q9HCG8 908 aaKnown RBP9.46□□□□□ -0.9
SRRM1-220ENST00000496882 ZBTB21Q9ULJ3 1066 aa9.46□□□□□ -0.9
SRRM1-220ENST00000496882 GH2P01242 217 aa9.45□□□□□ -0.9
SRRM1-220ENST00000496882 USP14P54578 494 aa9.45□□□□□ -0.9
SRRM1-220ENST00000496882 PRKCZQ05513 592 aa9.45□□□□□ -0.9
SRRM1-220ENST00000496882 RAB3GAP1Q15042 981 aa9.45□□□□□ -0.9
SRRM1-220ENST00000496882 ABCB5Q2M3G0 1257 aa9.45□□□□□ -0.9
SRRM1-220ENST00000496882 PRPF38BQ5VTL8 546 aaKnown RBP9.45□□□□□ -0.9
SRRM1-220ENST00000496882 USP17L2Q6R6M4 530 aa9.45□□□□□ -0.9
SRRM1-220ENST00000496882 GTF3C2Q8WUA4 911 aaPredicted RBP9.45□□□□□ -0.9
SRRM1-220ENST00000496882 HAUS7Q99871 368 aa9.45□□□□□ -0.9
SRRM1-220ENST00000496882 RIOK1Q9BRS2 568 aaKnown RBP9.45□□□□□ -0.9
SRRM1-220ENST00000496882 ASCC2Q9H1I8 757 aaPredicted RBP9.45□□□□□ -0.9
SRRM1-220ENST00000496882 DNAJC18Q9H819 358 aa9.45□□□□□ -0.9
SRRM1-220ENST00000496882 MCM9Q9NXL9 1143 aa9.45□□□□□ -0.9
SRRM1-220ENST00000496882 ATAD5Q96QE3 1844 aa9.45□□□□□ -0.9
SRRM1-220ENST00000496882 MPHOSPH10O00566 681 aaKnown RBP9.44□□□□□ -0.9
SRRM1-220ENST00000496882 ADCY3O60266 1144 aa9.44□□□□□ -0.9
SRRM1-220ENST00000496882 EN2P19622 333 aaPredicted RBP9.44□□□□□ -0.9
SRRM1-220ENST00000496882 HIC1Q14526 733 aa9.44□□□□□ -0.9
SRRM1-220ENST00000496882 RRP1BQ14684 758 aaKnown RBP9.44□□□□□ -0.9
SRRM1-220ENST00000496882 LRRFIP1Q32MZ4 808 aaKnown RBP9.44□□□□□ -0.9
SRRM1-220ENST00000496882 ECHDC1Q9NTX5 307 aa9.44□□□□□ -0.9
SRRM1-220ENST00000496882 SWAP70Q9UH65 585 aa9.44□□□□□ -0.9
SRRM1-220ENST00000496882 FOCADQ5VW36 1801 aa9.44□□□□□ -0.9
SRRM1-220ENST00000496882 MYO5AQ9Y4I1 1855 aaKnown RBP9.44□□□□□ -0.9
SRRM1-220ENST00000496882 MYH1P12882 1939 aa9.43□□□□□ -0.9
SRRM1-220ENST00000496882 PHIPQ8WWQ0 1821 aa9.43□□□□□ -0.9
SRRM1-220ENST00000496882 SMARCA5O60264 1052 aaPredicted RBP9.43□□□□□ -0.9
SRRM1-220ENST00000496882 MBD4O95243 580 aa9.43□□□□□ -0.9
SRRM1-220ENST00000496882 CTGFP29279 349 aa9.43□□□□□ -0.9
SRRM1-220ENST00000496882 HOXA7P31268 230 aaPredicted RBP9.43□□□□□ -0.9
SRRM1-220ENST00000496882 ADD2P35612 726 aa9.43□□□□□ -0.9
SRRM1-220ENST00000496882 FLT3LGP49771 235 aa9.43□□□□□ -0.9
SRRM1-220ENST00000496882 UBE3CQ15386 1083 aa9.43□□□□□ -0.9
SRRM1-220ENST00000496882 ZYXQ15942 572 aaKnown RBP9.43□□□□□ -0.9
SRRM1-220ENST00000496882 AMHR2Q16671 573 aa9.43□□□□□ -0.9
SRRM1-220ENST00000496882 TATDN1Q6P1N9 297 aa9.43□□□□□ -0.9
SRRM1-220ENST00000496882 LCORLQ8N3X6 602 aa9.43□□□□□ -0.9
SRRM1-220ENST00000496882 SDR42E1Q8WUS8 393 aa9.43□□□□□ -0.9
SRRM1-220ENST00000496882 EDC3Q96F86 508 aaKnown RBP9.43□□□□□ -0.9
SRRM1-220ENST00000496882 RNF208Q9H0X6 261 aa9.43□□□□□ -0.9
SRRM1-220ENST00000496882 ARMT1Q9H993 441 aa9.43□□□□□ -0.9
SRRM1-220ENST00000496882 ATP8A2Q9NTI2 1148 aa9.43□□□□□ -0.9
SRRM1-220ENST00000496882 PTPRFP10586 1907 aa9.43□□□□□ -0.9
SRRM1-220ENST00000496882 TCRBV5S4A2TA0A5A2 114 aa9.42□□□□□ -0.9
SRRM1-220ENST00000496882 USP17L15C9J2P7 530 aa9.42□□□□□ -0.9
SRRM1-220ENST00000496882 USP17L13C9JLJ4 530 aa9.42□□□□□ -0.9
SRRM1-220ENST00000496882 USP17L11C9JVI0 530 aa9.42□□□□□ -0.9
SRRM1-220ENST00000496882 USP17L18D6R9N7 530 aa9.42□□□□□ -0.9
SRRM1-220ENST00000496882 USP17L22D6RA61 530 aa9.42□□□□□ -0.9
SRRM1-220ENST00000496882 USP17L17D6RBQ6 530 aa9.42□□□□□ -0.9
SRRM1-220ENST00000496882 USP17L19D6RCP7 530 aa9.42□□□□□ -0.9
SRRM1-220ENST00000496882 USP17L20D6RJB6 530 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms