RNA–Protein interactions for RNA: ENST00000496785.5

CTDSP1-213, Transcript of CTD small phosphatase 1, humanhuman

TSL 5

Gene CTDSP1, Length 460 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-213ENST00000496785 ARHGEF6Q15052 776 aa22.91■■□□□ 1.26
CTDSP1-213ENST00000496785 SHROOM1Q2M3G4 852 aaPredicted RBP22.91■■□□□ 1.26
CTDSP1-213ENST00000496785 ZNF589Q86UQ0 364 aaPredicted RBP22.91■■□□□ 1.26
CTDSP1-213ENST00000496785 ERO1AQ96HE7 468 aa22.91■■□□□ 1.26
CTDSP1-213ENST00000496785 KIAA1683Q9H0B3 1180 aa22.91■■□□□ 1.26
CTDSP1-213ENST00000496785 ARHGEF10LQ9HCE6 1279 aa22.91■■□□□ 1.26
CTDSP1-213ENST00000496785 LOC285556D6RIA3 1793 aa22.91■■□□□ 1.26
CTDSP1-213ENST00000496785 AKR1B1P15121 316 aa22.9■■□□□ 1.26
CTDSP1-213ENST00000496785 OSBPP22059 807 aa22.9■■□□□ 1.26
CTDSP1-213ENST00000496785 SP3Q02447 781 aa22.9■■□□□ 1.26
CTDSP1-213ENST00000496785 VPS53Q5VIR6 699 aa22.9■■□□□ 1.26
CTDSP1-213ENST00000496785 TNS4Q8IZW8 715 aa22.9■■□□□ 1.26
CTDSP1-213ENST00000496785 ZNF444Q8N0Y2 327 aaPredicted RBP22.9■■□□□ 1.26
CTDSP1-213ENST00000496785 R3HDMLQ9H3Y0 253 aa22.9■■□□□ 1.26
CTDSP1-213ENST00000496785 FOXP2O15409 715 aa22.89■■□□□ 1.25
CTDSP1-213ENST00000496785 GUCY1A2P33402 732 aa22.89■■□□□ 1.25
CTDSP1-213ENST00000496785 ICA1Q05084 483 aa22.89■■□□□ 1.25
CTDSP1-213ENST00000496785 SMCR8Q8TEV9 937 aaPredicted RBP22.89■■□□□ 1.25
CTDSP1-213ENST00000496785 C12orf42Q96LP6 360 aa22.89■■□□□ 1.25
CTDSP1-213ENST00000496785 KANSL2Q9H9L4 492 aa22.89■■□□□ 1.25
CTDSP1-213ENST00000496785 PPP4R2Q9NY27 417 aa22.89■■□□□ 1.25
CTDSP1-213ENST00000496785 ANAPC4Q9UJX5 808 aa22.89■■□□□ 1.25
CTDSP1-213ENST00000496785 CASP8AP2Q9UKL3 1982 aa22.89■■□□□ 1.25
CTDSP1-213ENST00000496785 RASA1P20936 1047 aa22.88■■□□□ 1.25
CTDSP1-213ENST00000496785 KIF22Q14807 665 aa22.88■■□□□ 1.25
CTDSP1-213ENST00000496785 CTU1Q7Z7A3 348 aaKnown RBP22.88■■□□□ 1.25
CTDSP1-213ENST00000496785 SMIM22K7EJ46 135 aa22.87■■□□□ 1.25
CTDSP1-213ENST00000496785 FGAP02671 866 aa22.87■■□□□ 1.25
CTDSP1-213ENST00000496785 IRX3P78415 501 aaPredicted RBP22.87■■□□□ 1.25
CTDSP1-213ENST00000496785 TREML2Q5T2D2 321 aa22.87■■□□□ 1.25
CTDSP1-213ENST00000496785 STK11IPQ8N1F8 1099 aa22.87■■□□□ 1.25
CTDSP1-213ENST00000496785 DSCC1Q9BVC3 393 aa22.87■■□□□ 1.25
CTDSP1-213ENST00000496785 HOXA7P31268 230 aaPredicted RBP22.86■■□□□ 1.25
CTDSP1-213ENST00000496785 PKN2Q16513 984 aaKnown RBP22.86■■□□□ 1.25
CTDSP1-213ENST00000496785 BMP2KLQ5H9B9 411 aa22.86■■□□□ 1.25
CTDSP1-213ENST00000496785 PPP4R3BQ5MIZ7 849 aa22.86■■□□□ 1.25
CTDSP1-213ENST00000496785 C17orf99Q6UX52 265 aa22.86■■□□□ 1.25
CTDSP1-213ENST00000496785 CYP2C8P10632 490 aa22.85■■□□□ 1.25
CTDSP1-213ENST00000496785 PCP11498 1178 aaKnown RBP22.85■■□□□ 1.25
CTDSP1-213ENST00000496785 CHMLP26374 656 aa22.85■■□□□ 1.25
CTDSP1-213ENST00000496785 GCLCP48506 637 aaPredicted RBP22.85■■□□□ 1.25
CTDSP1-213ENST00000496785 DGKZQ13574 1117 aa22.85■■□□□ 1.25
CTDSP1-213ENST00000496785 ZYXQ15942 572 aaKnown RBP22.85■■□□□ 1.25
CTDSP1-213ENST00000496785 ACER1Q8TDN7 264 aa22.85■■□□□ 1.25
CTDSP1-213ENST00000496785 GTF3C2Q8WUA4 911 aaPredicted RBP22.85■■□□□ 1.25
CTDSP1-213ENST00000496785 EMILIN3Q9NT22 766 aa22.85■■□□□ 1.25
CTDSP1-213ENST00000496785 CTNNA3Q9UI47 895 aa22.85■■□□□ 1.25
CTDSP1-213ENST00000496785 ADGRA2Q96PE1 1338 aa22.84■■□□□ 1.25
CTDSP1-213ENST00000496785 PRDM1O75626 825 aa22.84■■□□□ 1.25
CTDSP1-213ENST00000496785 TSPY3P0CV98 308 aa22.84■■□□□ 1.25
CTDSP1-213ENST00000496785 TSPY8P0CW00 308 aa22.84■■□□□ 1.25
CTDSP1-213ENST00000496785 NT5C2P49902 561 aa22.84■■□□□ 1.25
CTDSP1-213ENST00000496785 LPAR1Q92633 364 aa22.84■■□□□ 1.25
CTDSP1-213ENST00000496785 ASCC2Q9H1I8 757 aaPredicted RBP22.84■■□□□ 1.25
CTDSP1-213ENST00000496785 RNF41Q9H4P4 317 aaPredicted RBP22.84■■□□□ 1.25
CTDSP1-213ENST00000496785 CPA4Q9UI42 421 aa22.84■■□□□ 1.25
CTDSP1-213ENST00000496785 TMX2Q9Y320 296 aa22.84■■□□□ 1.25
CTDSP1-213ENST00000496785 USP17L15C9J2P7 530 aa22.83■■□□□ 1.25
CTDSP1-213ENST00000496785 USP17L13C9JLJ4 530 aa22.83■■□□□ 1.25
CTDSP1-213ENST00000496785 USP17L11C9JVI0 530 aa22.83■■□□□ 1.25
CTDSP1-213ENST00000496785 USP17L18D6R9N7 530 aa22.83■■□□□ 1.25
CTDSP1-213ENST00000496785 USP17L22D6RA61 530 aa22.83■■□□□ 1.25
CTDSP1-213ENST00000496785 USP17L17D6RBQ6 530 aa22.83■■□□□ 1.25
CTDSP1-213ENST00000496785 USP17L19D6RCP7 530 aa22.83■■□□□ 1.25
CTDSP1-213ENST00000496785 USP17L20D6RJB6 530 aa22.83■■□□□ 1.25
CTDSP1-213ENST00000496785 CTDSPL2Q05D32 466 aa22.83■■□□□ 1.25
CTDSP1-213ENST00000496785 USP17L24Q0WX57 530 aa22.83■■□□□ 1.25
CTDSP1-213ENST00000496785 DDX52Q9Y2R4 599 aaKnown RBP eCLIP22.83■■□□□ 1.25
CTDSP1-213ENST00000496785 PLIN4Q96Q06 1357 aa22.83■■□□□ 1.25
CTDSP1-213ENST00000496785 ZNF213O14771 459 aa22.82■■□□□ 1.24
CTDSP1-213ENST00000496785 ORC4O43929 436 aa22.82■■□□□ 1.24
CTDSP1-213ENST00000496785 VCAM1P19320 739 aa22.82■■□□□ 1.24
CTDSP1-213ENST00000496785 ATP2B2Q01814 1243 aa22.82■■□□□ 1.24
CTDSP1-213ENST00000496785 NEDD1Q8NHV4 660 aa22.82■■□□□ 1.24
CTDSP1-213ENST00000496785 CD99L2Q8TCZ2 262 aa22.82■■□□□ 1.24
CTDSP1-213ENST00000496785 GOPCQ9HD26 462 aa22.82■■□□□ 1.24
CTDSP1-213ENST00000496785 NYAP2Q9P242 653 aa22.82■■□□□ 1.24
CTDSP1-213ENST00000496785 SYNPO2Q9UMS6 1093 aa22.82■■□□□ 1.24
CTDSP1-213ENST00000496785 A0A1W2PRG0 241 aa22.81■■□□□ 1.24
CTDSP1-213ENST00000496785 TSPY2A6NKD2 308 aa22.81■■□□□ 1.24
CTDSP1-213ENST00000496785 GNRH1P01148 92 aa22.81■■□□□ 1.24
CTDSP1-213ENST00000496785 BCRP11274 1271 aa22.81■■□□□ 1.24
CTDSP1-213ENST00000496785 EEF2P13639 858 aaKnown RBP22.81■■□□□ 1.24
CTDSP1-213ENST00000496785 LACTBP83111 547 aaPredicted RBP22.81■■□□□ 1.24
CTDSP1-213ENST00000496785 IMMTQ16891 758 aaKnown RBP22.81■■□□□ 1.24
CTDSP1-213ENST00000496785 FAM110CQ1W6H9 321 aa22.81■■□□□ 1.24
CTDSP1-213ENST00000496785 VCPKMTQ9H867 229 aa22.81■■□□□ 1.24
CTDSP1-213ENST00000496785 EFCC1Q9HA90 598 aa22.81■■□□□ 1.24
CTDSP1-213ENST00000496785 TOMM22Q9NS69 142 aa22.81■■□□□ 1.24
CTDSP1-213ENST00000496785 GREB1LQ9C091 1923 aaPredicted RBP22.8■■□□□ 1.24
CTDSP1-213ENST00000496785 TFAP4Q01664 338 aa22.8■■□□□ 1.24
CTDSP1-213ENST00000496785 CASC1Q6TDU7 716 aa22.8■■□□□ 1.24
CTDSP1-213ENST00000496785 MCOLN1Q9GZU1 580 aa22.8■■□□□ 1.24
CTDSP1-213ENST00000496785 TRIM17Q9Y577 477 aa22.8■■□□□ 1.24
CTDSP1-213ENST00000496785 IGKV6D-41A0A0C4DH26 115 aa22.79■■□□□ 1.24
CTDSP1-213ENST00000496785 SGSM2O43147 1006 aa22.79■■□□□ 1.24
CTDSP1-213ENST00000496785 FGRP09769 529 aa22.79■■□□□ 1.24
CTDSP1-213ENST00000496785 HERVK_113P62684 666 aa22.79■■□□□ 1.24
CTDSP1-213ENST00000496785 AKNAD1Q5T1N1 836 aa22.79■■□□□ 1.24
CTDSP1-213ENST00000496785 MFSD6Q6ZSS7 791 aa22.79■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms