RNA–Protein interactions for RNA: ENST00000496627.5

GCOM1-212, Transcript of GRINL1A complex locus 1, humanhuman

TSL 2

Gene GCOM1, Length 2,500 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCOM1-212ENST00000496627 V9GY48 417 aaPredicted RBP16.81■□□□□ 0.28
GCOM1-212ENST00000496627 KMT5BQ4FZB7 885 aa16.8■□□□□ 0.28
GCOM1-212ENST00000496627 C3orf67Q6ZVT6 689 aa16.8■□□□□ 0.28
GCOM1-212ENST00000496627 SMARCC1Q92922 1105 aaPredicted RBP16.8■□□□□ 0.28
GCOM1-212ENST00000496627 DDX41Q9UJV9 622 aaKnown RBP16.8■□□□□ 0.28
GCOM1-212ENST00000496627 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.8■□□□□ 0.284e-6■■□□□ 12.6
GCOM1-212ENST00000496627 MORC2Q9Y6X9 1032 aaPredicted RBP16.8■□□□□ 0.28
GCOM1-212ENST00000496627 LAMB1P07942 1786 aa16.8■□□□□ 0.28
GCOM1-212ENST00000496627 WTIPA6NIX2 430 aaPredicted RBP16.8■□□□□ 0.28
GCOM1-212ENST00000496627 BMP15O95972 392 aa16.8■□□□□ 0.28
GCOM1-212ENST00000496627 PCP11498 1178 aaKnown RBP16.8■□□□□ 0.28
GCOM1-212ENST00000496627 DMTNQ08495 405 aa16.8■□□□□ 0.28
GCOM1-212ENST00000496627 SF3B3Q15393 1217 aaKnown RBP16.8■□□□□ 0.28
GCOM1-212ENST00000496627 CLEC4GQ6UXB4 293 aa16.8■□□□□ 0.28
GCOM1-212ENST00000496627 FUT2Q10981 343 aa16.79■□□□□ 0.28
GCOM1-212ENST00000496627 TBX2Q13207 712 aaPredicted RBP16.79■□□□□ 0.28
GCOM1-212ENST00000496627 CCDC93Q567U6 631 aa16.79■□□□□ 0.28
GCOM1-212ENST00000496627 SPECC1LQ69YQ0 1117 aa16.79■□□□□ 0.28
GCOM1-212ENST00000496627 FBXO38Q6PIJ6 1188 aa16.79■□□□□ 0.28
GCOM1-212ENST00000496627 BAG1Q99933 345 aaPredicted RBP16.79■□□□□ 0.28
GCOM1-212ENST00000496627 MINPP1Q9UNW1 487 aa16.79■□□□□ 0.28
GCOM1-212ENST00000496627 NPHP1O15259 732 aa16.79■□□□□ 0.28
GCOM1-212ENST00000496627 DDAH1O94760 285 aa16.79■□□□□ 0.28
GCOM1-212ENST00000496627 ERCC5P28715 1186 aaPredicted RBP16.79■□□□□ 0.28
GCOM1-212ENST00000496627 GTF2E1P29083 439 aaPredicted RBP16.79■□□□□ 0.28
GCOM1-212ENST00000496627 AFMP43652 599 aa16.79■□□□□ 0.28
GCOM1-212ENST00000496627 EARS2Q5JPH6 523 aaKnown RBP16.79■□□□□ 0.28
GCOM1-212ENST00000496627 CTR9Q6PD62 1173 aa16.79■□□□□ 0.28
GCOM1-212ENST00000496627 TMEM139Q8IV31 216 aa16.79■□□□□ 0.28
GCOM1-212ENST00000496627 SPATA20Q8TB22 786 aa16.79■□□□□ 0.28
GCOM1-212ENST00000496627 EPSTI1Q96J88 318 aa16.79■□□□□ 0.28
GCOM1-212ENST00000496627 FAM84BQ96KN1 310 aaPredicted RBP16.79■□□□□ 0.28
GCOM1-212ENST00000496627 BAZ2BQ9UIF8 2168 aaKnown RBP16.79■□□□□ 0.28
GCOM1-212ENST00000496627 TMTC3Q6ZXV5 915 aa16.78■□□□□ 0.28
GCOM1-212ENST00000496627 REXO1L1PQ8IX06 675 aa16.78■□□□□ 0.28
GCOM1-212ENST00000496627 SYMPKQ92797 1274 aaKnown RBP16.78■□□□□ 0.28
GCOM1-212ENST00000496627 FERMT2Q96AC1 680 aa16.78■□□□□ 0.28
GCOM1-212ENST00000496627 SAMSN1Q9NSI8 373 aaKnown RBP16.78■□□□□ 0.28
GCOM1-212ENST00000496627 TROAPQ12815 778 aa16.78■□□□□ 0.28
GCOM1-212ENST00000496627 UTP14CQ5TAP6 766 aaKnown RBP16.78■□□□□ 0.28
GCOM1-212ENST00000496627 BICDL1Q6ZP65 573 aa16.78■□□□□ 0.28
GCOM1-212ENST00000496627 CTCFLQ8NI51 663 aaPredicted RBP16.78■□□□□ 0.28
GCOM1-212ENST00000496627 PPP2R2CQ9Y2T4 447 aa16.78■□□□□ 0.28
GCOM1-212ENST00000496627 CCDC88AQ3V6T2 1871 aa16.78■□□□□ 0.28
GCOM1-212ENST00000496627 A0A087X0B3 334 aa16.77■□□□□ 0.28
GCOM1-212ENST00000496627 USP17L12C9JPN9 530 aa16.77■□□□□ 0.28
GCOM1-212ENST00000496627 USP17L21D6R901 530 aa16.77■□□□□ 0.28
GCOM1-212ENST00000496627 SLFN14P0C7P3 912 aa16.77■□□□□ 0.28
GCOM1-212ENST00000496627 ERCC6LQ2NKX8 1250 aa16.77■□□□□ 0.28
GCOM1-212ENST00000496627 TRIM65Q6PJ69 517 aa16.77■□□□□ 0.28
GCOM1-212ENST00000496627 PKNOX2Q96KN3 472 aa16.77■□□□□ 0.28
GCOM1-212ENST00000496627 GTPBP4Q9BZE4 634 aaKnown RBP16.77■□□□□ 0.28
GCOM1-212ENST00000496627 SEMA3EO15041 775 aa16.77■□□□□ 0.28
GCOM1-212ENST00000496627 STX10O60499 249 aa16.77■□□□□ 0.28
GCOM1-212ENST00000496627 FGRP09769 529 aa16.77■□□□□ 0.28
GCOM1-212ENST00000496627 ZNF174Q15697 407 aa16.77■□□□□ 0.28
GCOM1-212ENST00000496627 TTC38Q5R3I4 469 aa16.77■□□□□ 0.28
GCOM1-212ENST00000496627 KLHL10Q6JEL2 608 aa16.77■□□□□ 0.28
GCOM1-212ENST00000496627 ZNF384Q8TF68 577 aa16.77■□□□□ 0.28
GCOM1-212ENST00000496627 CNTNAP5Q8WYK1 1306 aa16.77■□□□□ 0.27
GCOM1-212ENST00000496627 SYNRGQ9UMZ2 1314 aa16.77■□□□□ 0.27
GCOM1-212ENST00000496627 GOLGA6L9A6NEM1 432 aa16.76■□□□□ 0.27
GCOM1-212ENST00000496627 ADKP55263 362 aaKnown RBP16.76■□□□□ 0.27
GCOM1-212ENST00000496627 CT47A1Q5JQC4 288 aaPredicted RBP16.76■□□□□ 0.27
GCOM1-212ENST00000496627 TC2NQ8N9U0 490 aa16.76■□□□□ 0.27
GCOM1-212ENST00000496627 LRRN4CLQ8ND94 238 aa16.76■□□□□ 0.27
GCOM1-212ENST00000496627 CELF1Q92879 486 aaKnown RBP16.76■□□□□ 0.27
GCOM1-212ENST00000496627 PAGE5Q96GU1 130 aa16.76■□□□□ 0.27
GCOM1-212ENST00000496627 MED15Q96RN5 788 aa16.76■□□□□ 0.27
GCOM1-212ENST00000496627 CRNKL1Q9BZJ0 848 aaKnown RBP16.76■□□□□ 0.27
GCOM1-212ENST00000496627 KDM4FA0A1W2PPD8 638 aa16.76■□□□□ 0.27
GCOM1-212ENST00000496627 URI1O94763 535 aaPredicted RBP16.76■□□□□ 0.27
GCOM1-212ENST00000496627 MNS1Q8NEH6 495 aa16.76■□□□□ 0.27
GCOM1-212ENST00000496627 NSUN4Q96CB9 384 aaKnown RBP16.76■□□□□ 0.27
GCOM1-212ENST00000496627 PRDM4Q9UKN5 801 aa16.76■□□□□ 0.27
GCOM1-212ENST00000496627 VWA3AA6NCI4 1184 aa16.75■□□□□ 0.27
GCOM1-212ENST00000496627 WNT7AO00755 349 aa16.75■□□□□ 0.27
GCOM1-212ENST00000496627 ORC4O43929 436 aa16.75■□□□□ 0.27
GCOM1-212ENST00000496627 MECOMQ03112 1051 aa16.75■□□□□ 0.27
GCOM1-212ENST00000496627 FAM177A1Q8N128 213 aaPredicted RBP16.75■□□□□ 0.27
GCOM1-212ENST00000496627 SRRTQ9BXP5 876 aaKnown RBP16.75■□□□□ 0.27
GCOM1-212ENST00000496627 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.75■□□□□ 0.27
GCOM1-212ENST00000496627 MAST2Q6P0Q8 1798 aa16.75■□□□□ 0.27
GCOM1-212ENST00000496627 KCNQ2O43526 872 aa16.75■□□□□ 0.27
GCOM1-212ENST00000496627 NR1I3Q14994 352 aa16.75■□□□□ 0.27
GCOM1-212ENST00000496627 NOM1Q5C9Z4 860 aaKnown RBP16.75■□□□□ 0.27
GCOM1-212ENST00000496627 SPATA1Q5VX52 437 aa16.75■□□□□ 0.27
GCOM1-212ENST00000496627 SH3RF1Q7Z6J0 888 aa16.75■□□□□ 0.27
GCOM1-212ENST00000496627 FBXO33Q7Z6M2 555 aa16.75■□□□□ 0.27
GCOM1-212ENST00000496627 LINC00116Q8NCU8 138 aa16.75■□□□□ 0.27
GCOM1-212ENST00000496627 TNFRSF25Q93038 417 aa16.75■□□□□ 0.27
GCOM1-212ENST00000496627 A0A1B0GTH6 734 aa16.74■□□□□ 0.27
GCOM1-212ENST00000496627 KLRK1P26718 216 aa16.74■□□□□ 0.27
GCOM1-212ENST00000496627 CASP1P29466 404 aa16.74■□□□□ 0.27
GCOM1-212ENST00000496627 STX17P56962 302 aa16.74■□□□□ 0.27
GCOM1-212ENST00000496627 KRT222Q8N1A0 295 aa16.74■□□□□ 0.27
GCOM1-212ENST00000496627 SRBD1Q8N5C6 995 aaKnown RBP16.74■□□□□ 0.27
GCOM1-212ENST00000496627 GSDMAQ96QA5 445 aa16.74■□□□□ 0.27
GCOM1-212ENST00000496627 SPATA31A5Q5VU36 1347 aa16.74■□□□□ 0.27
GCOM1-212ENST00000496627 SPATA31A7Q8IWB4 1347 aa16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms