RNA–Protein interactions for RNA: ENST00000496360.5

MACF1-223, Transcript of microtubule-actin crosslinking factor 1, humanhuman

TSL 2

Gene MACF1, Length 2,080 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1-223ENST00000496360 NFE2L3Q9Y4A8 694 aa16.94■□□□□ 0.3
MACF1-223ENST00000496360 ITIH6Q6UXX5 1313 aa16.94■□□□□ 0.3
MACF1-223ENST00000496360 TJP1Q07157 1748 aa16.94■□□□□ 0.3
MACF1-223ENST00000496360 E7EWF7 191 aa16.93■□□□□ 0.3
MACF1-223ENST00000496360 POLR3DP05423 398 aaPredicted RBP16.93■□□□□ 0.3
MACF1-223ENST00000496360 CALRP27797 417 aaKnown RBP16.93■□□□□ 0.3
MACF1-223ENST00000496360 PNOCQ13519 176 aa16.93■□□□□ 0.3
MACF1-223ENST00000496360 METTL16Q86W50 562 aaKnown RBP16.93■□□□□ 0.3
MACF1-223ENST00000496360 KBTBD3Q8NAB2 608 aa16.93■□□□□ 0.3
MACF1-223ENST00000496360 KAT2BQ92831 832 aa16.93■□□□□ 0.3
MACF1-223ENST00000496360 SUCLG2Q96I99 432 aa16.93■□□□□ 0.3
MACF1-223ENST00000496360 NCOA5Q9HCD5 579 aaKnown RBP16.93■□□□□ 0.3
MACF1-223ENST00000496360 PCDHA5Q9Y5H7 936 aa16.93■□□□□ 0.3
MACF1-223ENST00000496360 WDR19Q8NEZ3 1342 aa16.93■□□□□ 0.3
MACF1-223ENST00000496360 DDX58O95786 925 aaKnown RBP16.93■□□□□ 0.3
MACF1-223ENST00000496360 IRAK1P51617 712 aa16.93■□□□□ 0.3
MACF1-223ENST00000496360 AMPD2Q01433 879 aa16.93■□□□□ 0.3
MACF1-223ENST00000496360 CKAP4Q07065 602 aaKnown RBP16.93■□□□□ 0.3
MACF1-223ENST00000496360 KANK3Q6NY19 840 aa16.93■□□□□ 0.3
MACF1-223ENST00000496360 RAD9BQ6WBX8 426 aa16.93■□□□□ 0.3
MACF1-223ENST00000496360 SLC35F6Q8N357 371 aa16.93■□□□□ 0.3
MACF1-223ENST00000496360 KCPQ6ZWJ8 1503 aa16.93■□□□□ 0.3
MACF1-223ENST00000496360 MYH14Q7Z406 1995 aaKnown RBP16.93■□□□□ 0.3
MACF1-223ENST00000496360 DCAF8L1A6NGE4 600 aa16.92■□□□□ 0.3
MACF1-223ENST00000496360 SOWAHDA6NJG2 315 aa16.92■□□□□ 0.3
MACF1-223ENST00000496360 GOLGA8KD6RF30 607 aa16.92■□□□□ 0.3
MACF1-223ENST00000496360 RPS6KA4O75676 772 aa16.92■□□□□ 0.3
MACF1-223ENST00000496360 FSBPO95073 299 aa16.92■□□□□ 0.3
MACF1-223ENST00000496360 CRKLP46109 303 aaKnown RBP16.92■□□□□ 0.3
MACF1-223ENST00000496360 LIG3P49916 1009 aa16.92■□□□□ 0.3
MACF1-223ENST00000496360 TRAPPC3LQ5T215 181 aa16.92■□□□□ 0.3
MACF1-223ENST00000496360 WWC2Q6AWC2 1192 aa16.92■□□□□ 0.3
MACF1-223ENST00000496360 SHC4Q6S5L8 630 aa16.92■□□□□ 0.3
MACF1-223ENST00000496360 COPRSQ9NQ92 184 aa16.92■□□□□ 0.3
MACF1-223ENST00000496360 ZC3H4Q9UPT8 1303 aaKnown RBP16.92■□□□□ 0.3
MACF1-223ENST00000496360 MFAP3LO75121 409 aa16.92■□□□□ 0.3
MACF1-223ENST00000496360 ADRA2BP18089 450 aa16.92■□□□□ 0.3
MACF1-223ENST00000496360 ARHGAP25P42331 645 aa16.92■□□□□ 0.3
MACF1-223ENST00000496360 TRIM14Q14142 442 aa16.92■□□□□ 0.3
MACF1-223ENST00000496360 ISM2Q6H9L7 571 aa16.92■□□□□ 0.3
MACF1-223ENST00000496360 MICALCLQ6ZW33 695 aa16.92■□□□□ 0.3
MACF1-223ENST00000496360 YTHDF3Q7Z739 585 aaKnown RBP16.92■□□□□ 0.3
MACF1-223ENST00000496360 DNAJC10Q8IXB1 793 aa16.92■□□□□ 0.3
MACF1-223ENST00000496360 PAGR1Q9BTK6 254 aa16.92■□□□□ 0.3
MACF1-223ENST00000496360 GNL3LQ9NVN8 582 aaKnown RBP16.92■□□□□ 0.3
MACF1-223ENST00000496360 WWC3Q9ULE0 1092 aa16.92■□□□□ 0.3
MACF1-223ENST00000496360 GOLGA6CA6NDK9 693 aa16.91■□□□□ 0.3
MACF1-223ENST00000496360 EIF3HO15372 352 aaKnown RBP eCLIP16.91■□□□□ 0.3
MACF1-223ENST00000496360 GOLGA6DP0CG33 693 aa16.91■□□□□ 0.3
MACF1-223ENST00000496360 PBX1P40424 430 aa16.91■□□□□ 0.3
MACF1-223ENST00000496360 CCT5P48643 541 aa16.91■□□□□ 0.3
MACF1-223ENST00000496360 TDO2P48775 406 aa16.91■□□□□ 0.3
MACF1-223ENST00000496360 MDM2Q00987 491 aaPredicted RBP16.91■□□□□ 0.3
MACF1-223ENST00000496360 NEDD9Q14511 834 aa16.91■□□□□ 0.3
MACF1-223ENST00000496360 PTPAQ15257 358 aa16.91■□□□□ 0.3
MACF1-223ENST00000496360 FILIP1LQ4L180 1135 aa16.91■□□□□ 0.3
MACF1-223ENST00000496360 KCNV1Q6PIU1 500 aa16.91■□□□□ 0.3
MACF1-223ENST00000496360 UBE3BQ7Z3V4 1068 aa16.91■□□□□ 0.3
MACF1-223ENST00000496360 TTC5Q8N0Z6 440 aa16.91■□□□□ 0.3
MACF1-223ENST00000496360 IRX2Q9BZI1 471 aaPredicted RBP16.91■□□□□ 0.3
MACF1-223ENST00000496360 GOLGA6AQ9NYA3 693 aa16.91■□□□□ 0.3
MACF1-223ENST00000496360 KCNH3Q9ULD8 1083 aa16.91■□□□□ 0.3
MACF1-223ENST00000496360 SIPA1L3O60292 1781 aaPredicted RBP16.91■□□□□ 0.3
MACF1-223ENST00000496360 CHUKO15111 745 aa16.9■□□□□ 0.3
MACF1-223ENST00000496360 ZEB2O60315 1214 aa16.9■□□□□ 0.3
MACF1-223ENST00000496360 SARSP49591 514 aaKnown RBP16.9■□□□□ 0.3
MACF1-223ENST00000496360 PLCD1P51178 756 aa16.9■□□□□ 0.3
MACF1-223ENST00000496360 MORC3Q14149 939 aa16.9■□□□□ 0.3
MACF1-223ENST00000496360 PLCB4Q15147 1175 aa16.9■□□□□ 0.3
MACF1-223ENST00000496360 TNNI3KQ59H18 835 aa16.9■□□□□ 0.3
MACF1-223ENST00000496360 IQCEQ6IPM2 695 aa16.9■□□□□ 0.3
MACF1-223ENST00000496360 GIMAP7Q8NHV1 300 aa16.9■□□□□ 0.3
MACF1-223ENST00000496360 KAZALD1Q96I82 304 aa16.9■□□□□ 0.3
MACF1-223ENST00000496360 CAPS2Q9BXY5 557 aa16.9■□□□□ 0.3
MACF1-223ENST00000496360 MAN1B1Q9UKM7 699 aa16.9■□□□□ 0.3
MACF1-223ENST00000496360 IQSEC3Q9UPP2 1182 aaPredicted RBP16.9■□□□□ 0.3
MACF1-223ENST00000496360 FPGT-TNNI3KV9GXZ4 949 aa16.9■□□□□ 0.3
MACF1-223ENST00000496360 UBR2Q8IWV8 1755 aa16.9■□□□□ 0.3
MACF1-223ENST00000496360 KIAA0754O94854 1291 aa16.9■□□□□ 0.3
MACF1-223ENST00000496360 MTF1Q14872 753 aa16.9■□□□□ 0.3
MACF1-223ENST00000496360 XAGE2Q96GT9 111 aa16.9■□□□□ 0.3
MACF1-223ENST00000496360 ANKRD65E5RJM6 399 aa16.89■□□□□ 0.29
MACF1-223ENST00000496360 CPLX1O14810 134 aa16.89■□□□□ 0.29
MACF1-223ENST00000496360 OPA1O60313 960 aa16.89■□□□□ 0.29
MACF1-223ENST00000496360 CDKL5O76039 1030 aa16.89■□□□□ 0.29
MACF1-223ENST00000496360 GPTP24298 496 aa16.89■□□□□ 0.29
MACF1-223ENST00000496360 SKOR1P84550 965 aa16.89■□□□□ 0.29
MACF1-223ENST00000496360 PDE4BQ07343 736 aa16.89■□□□□ 0.29
MACF1-223ENST00000496360 CCDC70Q6NSX1 233 aa16.89■□□□□ 0.29
MACF1-223ENST00000496360 ZNF790Q6PG37 636 aa16.89■□□□□ 0.29
MACF1-223ENST00000496360 CCDC129Q6ZRS4 1044 aa16.89■□□□□ 0.29
MACF1-223ENST00000496360 TRAPPC11Q7Z392 1133 aa16.89■□□□□ 0.29
MACF1-223ENST00000496360 ARHGEF1Q92888 912 aaKnown RBP16.89■□□□□ 0.29
MACF1-223ENST00000496360 DBNLQ9UJU6 430 aaKnown RBP16.89■□□□□ 0.29
MACF1-223ENST00000496360 GGA2Q9UJY4 613 aa16.89■□□□□ 0.29
MACF1-223ENST00000496360 CLSTN1O94985 981 aa16.89■□□□□ 0.29
MACF1-223ENST00000496360 ERCC3P19447 782 aa16.89■□□□□ 0.29
MACF1-223ENST00000496360 RDXP35241 583 aaKnown RBP16.89■□□□□ 0.29
MACF1-223ENST00000496360 POSTNQ15063 836 aa16.89■□□□□ 0.29
MACF1-223ENST00000496360 ZMYM1Q5SVZ6 1142 aa16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms