RNA–Protein interactions for RNA: ENST00000496037.1

SMARCAL1-213, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 4

Gene SMARCAL1, Length 542 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-213ENST00000496037 DNAAF4Q8WXU2 420 aa12.08□□□□□ -0.48
SMARCAL1-213ENST00000496037 CHD9Q3L8U1 2897 aa12.08□□□□□ -0.48
SMARCAL1-213ENST00000496037 REV3LO60673 3130 aa12.07□□□□□ -0.48
SMARCAL1-213ENST00000496037 GLRX3O76003 335 aaKnown RBP12.07□□□□□ -0.48
SMARCAL1-213ENST00000496037 KCNQ1P51787 676 aa12.07□□□□□ -0.48
SMARCAL1-213ENST00000496037 HERVK_113P62684 666 aa12.07□□□□□ -0.48
SMARCAL1-213ENST00000496037 ERVK-9P63128 1117 aa12.07□□□□□ -0.48
SMARCAL1-213ENST00000496037 ERVK-24P63145 666 aa12.07□□□□□ -0.48
SMARCAL1-213ENST00000496037 TFF2Q03403 129 aa12.07□□□□□ -0.48
SMARCAL1-213ENST00000496037 MAP2K5Q13163 448 aa12.07□□□□□ -0.48
SMARCAL1-213ENST00000496037 FKBP5Q13451 457 aaPredicted RBP12.07□□□□□ -0.48
SMARCAL1-213ENST00000496037 SKIV2LQ15477 1246 aaKnown RBP12.07□□□□□ -0.48
SMARCAL1-213ENST00000496037 EDC3Q96F86 508 aaKnown RBP12.07□□□□□ -0.48
SMARCAL1-213ENST00000496037 PBX4Q9BYU1 374 aa12.07□□□□□ -0.48
SMARCAL1-213ENST00000496037 AS3MTQ9HBK9 375 aa12.07□□□□□ -0.48
SMARCAL1-213ENST00000496037 TXNRD2Q9NNW7 524 aa12.07□□□□□ -0.48
SMARCAL1-213ENST00000496037 RLFQ13129 1914 aa12.07□□□□□ -0.48
SMARCAL1-213ENST00000496037 PEX10O60683 326 aa12.06□□□□□ -0.48
SMARCAL1-213ENST00000496037 HMGB1P09429 215 aaKnown RBP12.06□□□□□ -0.48
SMARCAL1-213ENST00000496037 ITGB8P26012 769 aa12.06□□□□□ -0.48
SMARCAL1-213ENST00000496037 PBX2P40425 430 aa12.06□□□□□ -0.48
SMARCAL1-213ENST00000496037 ATP2B2Q01814 1243 aa12.06□□□□□ -0.48
SMARCAL1-213ENST00000496037 MAP3K10Q02779 954 aa12.06□□□□□ -0.48
SMARCAL1-213ENST00000496037 TLE2Q04725 743 aa12.06□□□□□ -0.48
SMARCAL1-213ENST00000496037 METTL24Q5JXM2 366 aa12.06□□□□□ -0.48
SMARCAL1-213ENST00000496037 C1orf53Q5VUE5 145 aa12.06□□□□□ -0.48
SMARCAL1-213ENST00000496037 CCDC174Q6PII3 467 aa12.06□□□□□ -0.48
SMARCAL1-213ENST00000496037 G2E3Q7L622 706 aa12.06□□□□□ -0.48
SMARCAL1-213ENST00000496037 GTF3C2Q8WUA4 911 aaPredicted RBP12.06□□□□□ -0.48
SMARCAL1-213ENST00000496037 IDI2Q9BXS1 227 aa12.06□□□□□ -0.48
SMARCAL1-213ENST00000496037 PORCNQ9H237 461 aa12.06□□□□□ -0.48
SMARCAL1-213ENST00000496037 TMOD4Q9NZQ9 345 aa12.06□□□□□ -0.48
SMARCAL1-213ENST00000496037 TCF20Q9UGU0 1960 aaKnown RBP12.05□□□□□ -0.48
SMARCAL1-213ENST00000496037 SMIM22K7EJ46 135 aa12.05□□□□□ -0.48
SMARCAL1-213ENST00000496037 SLURP2P0DP57 97 aa12.05□□□□□ -0.48
SMARCAL1-213ENST00000496037 HOXB1P14653 301 aaPredicted RBP12.05□□□□□ -0.48
SMARCAL1-213ENST00000496037 FOXK1P85037 733 aa12.05□□□□□ -0.48
SMARCAL1-213ENST00000496037 FLIIQ13045 1269 aa12.05□□□□□ -0.48
SMARCAL1-213ENST00000496037 SH3D19Q5HYK7 790 aa12.05□□□□□ -0.48
SMARCAL1-213ENST00000496037 EPHA10Q5JZY3 1008 aa12.05□□□□□ -0.48
SMARCAL1-213ENST00000496037 WDR78Q5VTH9 848 aa12.05□□□□□ -0.48
SMARCAL1-213ENST00000496037 PAGR1Q9BTK6 254 aa12.05□□□□□ -0.48
SMARCAL1-213ENST00000496037 PUS3Q9BZE2 481 aaKnown RBP12.05□□□□□ -0.48
SMARCAL1-213ENST00000496037 OSBPL5Q9H0X9 879 aaPredicted RBP12.05□□□□□ -0.48
SMARCAL1-213ENST00000496037 C11orf16Q9NQ32 467 aa12.05□□□□□ -0.48
SMARCAL1-213ENST00000496037 MSRAQ9UJ68 235 aa12.05□□□□□ -0.48
SMARCAL1-213ENST00000496037 CHD7Q9P2D1 2997 aa12.04□□□□□ -0.48
SMARCAL1-213ENST00000496037 DDTLA6NHG4 134 aaPredicted RBP12.04□□□□□ -0.48
SMARCAL1-213ENST00000496037 USP17L5A8MUK1 530 aa12.04□□□□□ -0.48
SMARCAL1-213ENST00000496037 APBB1O00213 710 aa12.04□□□□□ -0.48
SMARCAL1-213ENST00000496037 KIAA0355O15063 1070 aa12.04□□□□□ -0.48
SMARCAL1-213ENST00000496037 LDHBP07195 334 aaKnown RBP12.04□□□□□ -0.48
SMARCAL1-213ENST00000496037 PDE4AP27815 886 aa12.04□□□□□ -0.48
SMARCAL1-213ENST00000496037 PRDX5P30044 214 aa12.04□□□□□ -0.48
SMARCAL1-213ENST00000496037 ADCYAP1R1P41586 468 aa12.04□□□□□ -0.48
SMARCAL1-213ENST00000496037 EMP3P54852 163 aa12.04□□□□□ -0.48
SMARCAL1-213ENST00000496037 CCNA1P78396 465 aa12.04□□□□□ -0.48
SMARCAL1-213ENST00000496037 PICALMQ13492 652 aa12.04□□□□□ -0.48
SMARCAL1-213ENST00000496037 MTMR2Q13614 643 aa12.04□□□□□ -0.48
SMARCAL1-213ENST00000496037 WDR43Q15061 677 aaKnown RBP eCLIP12.04□□□□□ -0.48
SMARCAL1-213ENST00000496037 RAB30Q15771 203 aa12.04□□□□□ -0.48
SMARCAL1-213ENST00000496037 SH3BP5LQ7L8J4 393 aa12.04□□□□□ -0.48
SMARCAL1-213ENST00000496037 TSPYL6Q8N831 410 aa12.04□□□□□ -0.48
SMARCAL1-213ENST00000496037 MARVELD3Q96A59 401 aa12.04□□□□□ -0.48
SMARCAL1-213ENST00000496037 FERMT2Q96AC1 680 aa12.04□□□□□ -0.48
SMARCAL1-213ENST00000496037 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.04□□□□□ -0.48
SMARCAL1-213ENST00000496037 FLRT1Q9NZU1 646 aa12.04□□□□□ -0.48
SMARCAL1-213ENST00000496037 ERC2O15083 957 aa12.03□□□□□ -0.48
SMARCAL1-213ENST00000496037 PQBP1O60828 265 aaKnown RBP12.03□□□□□ -0.48
SMARCAL1-213ENST00000496037 IFIT1P09914 478 aaKnown RBP12.03□□□□□ -0.48
SMARCAL1-213ENST00000496037 HOXA7P31268 230 aaPredicted RBP12.03□□□□□ -0.48
SMARCAL1-213ENST00000496037 CYP2C19P33261 490 aa12.03□□□□□ -0.48
SMARCAL1-213ENST00000496037 NHLH1Q02575 133 aa12.03□□□□□ -0.48
SMARCAL1-213ENST00000496037 ANO1Q5XXA6 986 aa12.03□□□□□ -0.48
SMARCAL1-213ENST00000496037 HERVK_113Q902F9 699 aa12.03□□□□□ -0.48
SMARCAL1-213ENST00000496037 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.03□□□□□ -0.48
SMARCAL1-213ENST00000496037 SLC28A3Q9HAS3 691 aa12.03□□□□□ -0.48
SMARCAL1-213ENST00000496037 TMEM39AQ9NV64 488 aa12.03□□□□□ -0.48
SMARCAL1-213ENST00000496037 RBPJLQ9UBG7 517 aa12.03□□□□□ -0.48
SMARCAL1-213ENST00000496037 IVNS1ABPQ9Y6Y0 642 aa12.03□□□□□ -0.48
SMARCAL1-213ENST00000496037 KIF16BQ96L93 1317 aa12.03□□□□□ -0.48
SMARCAL1-213ENST00000496037 RFX7Q2KHR2 1363 aa12.03□□□□□ -0.48
SMARCAL1-213ENST00000496037 WDFY4Q6ZS81 3184 aa12.02□□□□□ -0.48
SMARCAL1-213ENST00000496037 SLC15A5A6NIM6 579 aa12.02□□□□□ -0.49
SMARCAL1-213ENST00000496037 FAM196BA6NMK8 535 aa12.02□□□□□ -0.49
SMARCAL1-213ENST00000496037 GRXCR1A8MXD5 290 aa12.02□□□□□ -0.49
SMARCAL1-213ENST00000496037 PRR33A8MZF0 331 aa12.02□□□□□ -0.49
SMARCAL1-213ENST00000496037 TBC1D12O60347 775 aa12.02□□□□□ -0.49
SMARCAL1-213ENST00000496037 PDE8BO95263 885 aa12.02□□□□□ -0.49
SMARCAL1-213ENST00000496037 CYBAP13498 195 aa12.02□□□□□ -0.49
SMARCAL1-213ENST00000496037 Q3C1V9 767 aa12.02□□□□□ -0.49
SMARCAL1-213ENST00000496037 TRPV1Q8NER1 839 aa12.02□□□□□ -0.49
SMARCAL1-213ENST00000496037 GRM8O00222 908 aa12.01□□□□□ -0.49
SMARCAL1-213ENST00000496037 SEPT4O43236 478 aa12.01□□□□□ -0.49
SMARCAL1-213ENST00000496037 BACE1P56817 501 aa12.01□□□□□ -0.49
SMARCAL1-213ENST00000496037 PPIGQ13427 754 aaKnown RBP eCLIP12.01□□□□□ -0.49
SMARCAL1-213ENST00000496037 DSG2Q14126 1118 aa12.01□□□□□ -0.49
SMARCAL1-213ENST00000496037 PUM3Q15397 648 aaKnown RBP12.01□□□□□ -0.49
SMARCAL1-213ENST00000496037 PLPP6Q8IY26 295 aa12.01□□□□□ -0.49
SMARCAL1-213ENST00000496037 SLC44A5Q8NCS7 719 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms