RNA–Protein interactions for RNA: ENST00000495934.2

C9orf78-207, Transcript of chromosome 9 open reading frame 78, humanhuman

TSL 5

Gene C9orf78, Length 472 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf78-207ENST00000495934 FPGSQ05932 587 aa12.7□□□□□ -0.38
C9orf78-207ENST00000495934 C1orf53Q5VUE5 145 aa12.7□□□□□ -0.38
C9orf78-207ENST00000495934 ANO1Q5XXA6 986 aa12.7□□□□□ -0.38
C9orf78-207ENST00000495934 PPP4R3CPQ6ZMV5 832 aa12.7□□□□□ -0.38
C9orf78-207ENST00000495934 FERMT2Q96AC1 680 aa12.7□□□□□ -0.38
C9orf78-207ENST00000495934 FAM163AQ96GL9 167 aaPredicted RBP12.7□□□□□ -0.38
C9orf78-207ENST00000495934 TACC3Q9Y6A5 838 aa12.7□□□□□ -0.38
C9orf78-207ENST00000495934 MROH7-TTC4A0A0A0MT08 1334 aa12.69□□□□□ -0.38
C9orf78-207ENST00000495934 C19orf81C9J6K1 198 aa12.69□□□□□ -0.38
C9orf78-207ENST00000495934 SEMA3EO15041 775 aa12.69□□□□□ -0.38
C9orf78-207ENST00000495934 NPM3O75607 178 aaKnown RBP12.69□□□□□ -0.38
C9orf78-207ENST00000495934 CLTBP09497 229 aa12.69□□□□□ -0.38
C9orf78-207ENST00000495934 RAG1P15918 1043 aa12.69□□□□□ -0.38
C9orf78-207ENST00000495934 PHKA1P46020 1223 aa12.69□□□□□ -0.38
C9orf78-207ENST00000495934 RHBDL3P58872 404 aa12.69□□□□□ -0.38
C9orf78-207ENST00000495934 CCNA1P78396 465 aa12.69□□□□□ -0.38
C9orf78-207ENST00000495934 NPLOC4Q8TAT6 608 aa12.69□□□□□ -0.38
C9orf78-207ENST00000495934 TNNQ9UQP3 1299 aa12.69□□□□□ -0.38
C9orf78-207ENST00000495934 RABGAP1Q9Y3P9 1069 aa12.69□□□□□ -0.38
C9orf78-207ENST00000495934 IVNS1ABPQ9Y6Y0 642 aa12.69□□□□□ -0.38
C9orf78-207ENST00000495934 SIPA1L1O43166 1804 aa12.69□□□□□ -0.38
C9orf78-207ENST00000495934 PTPRCP08575 1304 aa12.68□□□□□ -0.38
C9orf78-207ENST00000495934 SMCHD1A6NHR9 2005 aa12.68□□□□□ -0.38
C9orf78-207ENST00000495934 USP17L10C9JJH3 530 aa12.68□□□□□ -0.38
C9orf78-207ENST00000495934 EYA2O00167 538 aa12.68□□□□□ -0.38
C9orf78-207ENST00000495934 CNMDO75829 334 aa12.68□□□□□ -0.38
C9orf78-207ENST00000495934 ASNSP08243 561 aa12.68□□□□□ -0.38
C9orf78-207ENST00000495934 HOXC6P09630 235 aa12.68□□□□□ -0.38
C9orf78-207ENST00000495934 IGFBP4P22692 258 aa12.68□□□□□ -0.38
C9orf78-207ENST00000495934 PTPREP23469 700 aa12.68□□□□□ -0.38
C9orf78-207ENST00000495934 ADGRE1Q14246 886 aa12.68□□□□□ -0.38
C9orf78-207ENST00000495934 ATP2B3Q16720 1220 aa12.68□□□□□ -0.38
C9orf78-207ENST00000495934 ABCF2Q9UG63 623 aa12.68□□□□□ -0.38
C9orf78-207ENST00000495934 HERC5Q9UII4 1024 aaKnown RBP12.68□□□□□ -0.38
C9orf78-207ENST00000495934 TRANK1O15050 2925 aa12.67□□□□□ -0.38
C9orf78-207ENST00000495934 GPR75-ASB3A0A0A6YYF3 556 aa12.67□□□□□ -0.38
C9orf78-207ENST00000495934 KIAA0355O15063 1070 aa12.67□□□□□ -0.38
C9orf78-207ENST00000495934 BMP1P13497 986 aa12.67□□□□□ -0.38
C9orf78-207ENST00000495934 PBX2P40425 430 aa12.67□□□□□ -0.38
C9orf78-207ENST00000495934 GRB14Q14449 540 aa12.67□□□□□ -0.38
C9orf78-207ENST00000495934 LRRC41Q15345 812 aa12.67□□□□□ -0.38
C9orf78-207ENST00000495934 CCDC129Q6ZRS4 1044 aa12.67□□□□□ -0.38
C9orf78-207ENST00000495934 ALYREFQ86V81 257 aaKnown RBP12.67□□□□□ -0.38
C9orf78-207ENST00000495934 ARHGAP45Q92619 1136 aa12.67□□□□□ -0.38
C9orf78-207ENST00000495934 PBX4Q9BYU1 374 aa12.67□□□□□ -0.38
C9orf78-207ENST00000495934 EPHX3Q9H6B9 360 aa12.67□□□□□ -0.38
C9orf78-207ENST00000495934 CXXC1Q9P0U4 656 aaPredicted RBP12.67□□□□□ -0.38
C9orf78-207ENST00000495934 SEPT4O43236 478 aa12.66□□□□□ -0.38
C9orf78-207ENST00000495934 IGHA2P01877 340 aa12.66□□□□□ -0.38
C9orf78-207ENST00000495934 JAG1P78504 1218 aa12.66□□□□□ -0.38
C9orf78-207ENST00000495934 TMEM31Q5JXX7 168 aa12.66□□□□□ -0.38
C9orf78-207ENST00000495934 SPTY2D1Q68D10 685 aaPredicted RBP12.66□□□□□ -0.38
C9orf78-207ENST00000495934 ATG9AQ7Z3C6 839 aa12.66□□□□□ -0.38
C9orf78-207ENST00000495934 SNX27Q96L92 541 aa12.66□□□□□ -0.38
C9orf78-207ENST00000495934 TSPYL2Q9H2G4 693 aaPredicted RBP12.66□□□□□ -0.38
C9orf78-207ENST00000495934 GBF1Q92538 1859 aa12.65□□□□□ -0.38
C9orf78-207ENST00000495934 ZNF236Q9UL36 1845 aa12.65□□□□□ -0.38
C9orf78-207ENST00000495934 GRXCR1A8MXD5 290 aa12.65□□□□□ -0.38
C9orf78-207ENST00000495934 PQBP1O60828 265 aaKnown RBP12.65□□□□□ -0.38
C9orf78-207ENST00000495934 TRIM27P14373 513 aa12.65□□□□□ -0.38
C9orf78-207ENST00000495934 RFX5P48382 616 aaPredicted RBP12.65□□□□□ -0.38
C9orf78-207ENST00000495934 MECOMQ03112 1051 aa12.65□□□□□ -0.38
C9orf78-207ENST00000495934 RASGRF1Q13972 1273 aa12.65□□□□□ -0.38
C9orf78-207ENST00000495934 SHROOM1Q2M3G4 852 aaPredicted RBP12.65□□□□□ -0.38
C9orf78-207ENST00000495934 FAM47AQ5JRC9 791 aa12.65□□□□□ -0.38
C9orf78-207ENST00000495934 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.65□□□□□ -0.38
C9orf78-207ENST00000495934 EMILIN3Q9NT22 766 aa12.65□□□□□ -0.38
C9orf78-207ENST00000495934 TMEM39AQ9NV64 488 aa12.65□□□□□ -0.38
C9orf78-207ENST00000495934 RCAN3Q9UKA8 241 aa12.65□□□□□ -0.38
C9orf78-207ENST00000495934 PHF24Q9UPV7 400 aa12.65□□□□□ -0.38
C9orf78-207ENST00000495934 GDF11O95390 407 aa12.64□□□□□ -0.39
C9orf78-207ENST00000495934 MAP4K4O95819 1239 aaPredicted RBP12.64□□□□□ -0.39
C9orf78-207ENST00000495934 ADORA1P30542 326 aa12.64□□□□□ -0.39
C9orf78-207ENST00000495934 KCNQ1P51787 676 aa12.64□□□□□ -0.39
C9orf78-207ENST00000495934 TFF2Q03403 129 aa12.64□□□□□ -0.39
C9orf78-207ENST00000495934 AAK1Q2M2I8 961 aa12.64□□□□□ -0.39
C9orf78-207ENST00000495934 OLFML2BQ68BL8 750 aa12.64□□□□□ -0.39
C9orf78-207ENST00000495934 CCDC102BQ68D86 513 aa12.64□□□□□ -0.39
C9orf78-207ENST00000495934 USP17L2Q6R6M4 530 aa12.64□□□□□ -0.39
C9orf78-207ENST00000495934 ATF7IPQ6VMQ6 1270 aa12.64□□□□□ -0.39
C9orf78-207ENST00000495934 ERICH6Q7L0X2 663 aa12.64□□□□□ -0.39
C9orf78-207ENST00000495934 DPP9Q86TI2 863 aa12.64□□□□□ -0.39
C9orf78-207ENST00000495934 ZNF384Q8TF68 577 aa12.64□□□□□ -0.39
C9orf78-207ENST00000495934 USP44Q9H0E7 712 aa12.64□□□□□ -0.39
C9orf78-207ENST00000495934 SIL1Q9H173 461 aa12.64□□□□□ -0.39
C9orf78-207ENST00000495934 CEP126Q9P2H0 1117 aa12.64□□□□□ -0.39
C9orf78-207ENST00000495934 PI4KBQ9UBF8 816 aa12.64□□□□□ -0.39
C9orf78-207ENST00000495934 PRRC2BQ5JSZ5 2229 aaKnown RBP12.64□□□□□ -0.39
C9orf78-207ENST00000495934 PDS5AQ29RF7 1337 aaKnown RBP12.63□□□□□ -0.39
C9orf78-207ENST00000495934 USP17L15C9J2P7 530 aa12.63□□□□□ -0.39
C9orf78-207ENST00000495934 USP17L13C9JLJ4 530 aa12.63□□□□□ -0.39
C9orf78-207ENST00000495934 USP17L11C9JVI0 530 aa12.63□□□□□ -0.39
C9orf78-207ENST00000495934 USP17L18D6R9N7 530 aa12.63□□□□□ -0.39
C9orf78-207ENST00000495934 USP17L22D6RA61 530 aa12.63□□□□□ -0.39
C9orf78-207ENST00000495934 USP17L17D6RBQ6 530 aa12.63□□□□□ -0.39
C9orf78-207ENST00000495934 USP17L19D6RCP7 530 aa12.63□□□□□ -0.39
C9orf78-207ENST00000495934 USP17L20D6RJB6 530 aa12.63□□□□□ -0.39
C9orf78-207ENST00000495934 ZBTB22O15209 634 aa12.63□□□□□ -0.39
C9orf78-207ENST00000495934 RLBP1P12271 317 aa12.63□□□□□ -0.39
C9orf78-207ENST00000495934 USP17L24Q0WX57 530 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms