RNA–Protein interactions for RNA: ENST00000495787.1

ECHDC3-204, Transcript of enoyl-CoA hydratase domain containing 3, humanhuman

TSL 3

Gene ECHDC3, Length 505 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3-204ENST00000495787 CNOT7Q9UIV1 285 aaKnown RBP12.55□□□□□ -0.4
ECHDC3-204ENST00000495787 SLC12A7Q9Y666 1083 aa12.55□□□□□ -0.4
ECHDC3-204ENST00000495787 PTPDC1A2A3K4 754 aa12.54□□□□□ -0.4
ECHDC3-204ENST00000495787 TSPY2A6NKD2 308 aa12.54□□□□□ -0.4
ECHDC3-204ENST00000495787 GOLGA8AA7E2F4 631 aa12.54□□□□□ -0.4
ECHDC3-204ENST00000495787 JAK2O60674 1132 aa12.54□□□□□ -0.4
ECHDC3-204ENST00000495787 BAG4O95429 457 aaKnown RBP12.54□□□□□ -0.4
ECHDC3-204ENST00000495787 ZSCAN22P10073 491 aaPredicted RBP12.54□□□□□ -0.4
ECHDC3-204ENST00000495787 CDK8P49336 464 aa12.54□□□□□ -0.4
ECHDC3-204ENST00000495787 MMP14P50281 582 aa12.54□□□□□ -0.4
ECHDC3-204ENST00000495787 SOX10P56693 466 aa12.54□□□□□ -0.4
ECHDC3-204ENST00000495787 SLC4A8Q2Y0W8 1093 aa12.54□□□□□ -0.4
ECHDC3-204ENST00000495787 RGMBQ6NW40 437 aa12.54□□□□□ -0.4
ECHDC3-204ENST00000495787 USP48Q86UV5 1035 aa12.54□□□□□ -0.4
ECHDC3-204ENST00000495787 ZNF444Q8N0Y2 327 aaPredicted RBP12.54□□□□□ -0.4
ECHDC3-204ENST00000495787 ENAHQ8N8S7 591 aaPredicted RBP12.54□□□□□ -0.4
ECHDC3-204ENST00000495787 FAM184AQ8NB25 1140 aa12.54□□□□□ -0.4
ECHDC3-204ENST00000495787 CCDC102AQ96A19 550 aa12.54□□□□□ -0.4
ECHDC3-204ENST00000495787 TCP11L1Q9NUJ3 509 aa12.54□□□□□ -0.4
ECHDC3-204ENST00000495787 TAOK2Q9UL54 1235 aa12.54□□□□□ -0.4
ECHDC3-204ENST00000495787 DDX11L8A8MPP1 907 aa12.53□□□□□ -0.4
ECHDC3-204ENST00000495787 FAM155AB1AL88 458 aaPredicted RBP12.53□□□□□ -0.4
ECHDC3-204ENST00000495787 CPLX1O14810 134 aa12.53□□□□□ -0.4
ECHDC3-204ENST00000495787 CDKL5O76039 1030 aa12.53□□□□□ -0.4
ECHDC3-204ENST00000495787 RASA1P20936 1047 aa12.53□□□□□ -0.4
ECHDC3-204ENST00000495787 PTMSP20962 102 aa12.53□□□□□ -0.4
ECHDC3-204ENST00000495787 TFAP4Q01664 338 aa12.53□□□□□ -0.4
ECHDC3-204ENST00000495787 PPP2R5BQ15173 497 aa12.53□□□□□ -0.4
ECHDC3-204ENST00000495787 FAM47AQ5JRC9 791 aa12.53□□□□□ -0.4
ECHDC3-204ENST00000495787 IFIT1BQ5T764 474 aaKnown RBP12.53□□□□□ -0.4
ECHDC3-204ENST00000495787 PRPF38BQ5VTL8 546 aaKnown RBP12.53□□□□□ -0.4
ECHDC3-204ENST00000495787 CPLX2Q6PUV4 134 aaKnown RBP12.53□□□□□ -0.4
ECHDC3-204ENST00000495787 MICALL2Q8IY33 904 aa12.53□□□□□ -0.4
ECHDC3-204ENST00000495787 ZNF654Q8IZM8 581 aa12.53□□□□□ -0.4
ECHDC3-204ENST00000495787 OGFOD1Q8N543 542 aa12.53□□□□□ -0.4
ECHDC3-204ENST00000495787 ANKS1AQ92625 1134 aa12.53□□□□□ -0.4
ECHDC3-204ENST00000495787 DDX11Q96FC9 970 aa12.53□□□□□ -0.4
ECHDC3-204ENST00000495787 SWAP70Q9UH65 585 aa12.53□□□□□ -0.4
ECHDC3-204ENST00000495787 MTMR6Q9Y217 621 aa12.53□□□□□ -0.4
ECHDC3-204ENST00000495787 PCDHAC2Q9Y5I4 1007 aa12.53□□□□□ -0.4
ECHDC3-204ENST00000495787 CCDC196A0A1B0GTZ2 297 aa12.52□□□□□ -0.41
ECHDC3-204ENST00000495787 GOLGA6L22H0YM25 854 aa12.52□□□□□ -0.41
ECHDC3-204ENST00000495787 DTNBO60941 627 aa12.52□□□□□ -0.41
ECHDC3-204ENST00000495787 ENTPD3O75355 529 aa12.52□□□□□ -0.41
ECHDC3-204ENST00000495787 F13A1P00488 732 aa12.52□□□□□ -0.41
ECHDC3-204ENST00000495787 HLA-DOAP06340 250 aa12.52□□□□□ -0.41
ECHDC3-204ENST00000495787 TSPY3P0CV98 308 aa12.52□□□□□ -0.41
ECHDC3-204ENST00000495787 TSPY8P0CW00 308 aa12.52□□□□□ -0.41
ECHDC3-204ENST00000495787 KIF23Q02241 960 aaPredicted RBP12.52□□□□□ -0.41
ECHDC3-204ENST00000495787 GABPAQ06546 454 aa12.52□□□□□ -0.41
ECHDC3-204ENST00000495787 NFIAQ12857 509 aa12.52□□□□□ -0.41
ECHDC3-204ENST00000495787 DLGAP5Q15398 846 aa12.52□□□□□ -0.41
ECHDC3-204ENST00000495787 FOXD4L5Q5VV16 416 aaPredicted RBP12.52□□□□□ -0.41
ECHDC3-204ENST00000495787 KRT26Q7Z3Y9 468 aa12.52□□□□□ -0.41
ECHDC3-204ENST00000495787 CATIPQ7Z7H3 387 aa12.52□□□□□ -0.41
ECHDC3-204ENST00000495787 MICU3Q86XE3 530 aa12.52□□□□□ -0.41
ECHDC3-204ENST00000495787 DGKHQ86XP1 1220 aa12.52□□□□□ -0.41
ECHDC3-204ENST00000495787 RAB11FIP4Q86YS3 637 aa12.52□□□□□ -0.41
ECHDC3-204ENST00000495787 C2orf69Q8N8R5 385 aa12.52□□□□□ -0.41
ECHDC3-204ENST00000495787 MTMR14Q8NCE2 650 aa12.52□□□□□ -0.41
ECHDC3-204ENST00000495787 SLC44A5Q8NCS7 719 aa12.52□□□□□ -0.41
ECHDC3-204ENST00000495787 FOXD4L4Q8WXT5 416 aaPredicted RBP12.52□□□□□ -0.41
ECHDC3-204ENST00000495787 DPF2Q92785 391 aa12.52□□□□□ -0.41
ECHDC3-204ENST00000495787 PRMT6Q96LA8 375 aaPredicted RBP12.52□□□□□ -0.41
ECHDC3-204ENST00000495787 EHD4Q9H223 541 aa12.52□□□□□ -0.41
ECHDC3-204ENST00000495787 DHX36Q9H2U1 1008 aaKnown RBP12.52□□□□□ -0.41
ECHDC3-204ENST00000495787 GBA2Q9HCG7 927 aaPredicted RBP12.52□□□□□ -0.41
ECHDC3-204ENST00000495787 COL2A1P02458 1487 aaPredicted RBP12.52□□□□□ -0.41
ECHDC3-204ENST00000495787 SIPA1L1O43166 1804 aa12.51□□□□□ -0.41
ECHDC3-204ENST00000495787 SHTN1A0MZ66 631 aa12.51□□□□□ -0.41
ECHDC3-204ENST00000495787 VPS37CA5D8V6 355 aaPredicted RBP12.51□□□□□ -0.41
ECHDC3-204ENST00000495787 SPDYE2BA6NHP3 402 aa12.51□□□□□ -0.41
ECHDC3-204ENST00000495787 DDAH1O94760 285 aa12.51□□□□□ -0.41
ECHDC3-204ENST00000495787 SPDYE6P0CI01 402 aa12.51□□□□□ -0.41
ECHDC3-204ENST00000495787 CALM1P0DP23 149 aa12.51□□□□□ -0.41
ECHDC3-204ENST00000495787 CALM2P0DP24 149 aa12.51□□□□□ -0.41
ECHDC3-204ENST00000495787 CALM3P0DP25 149 aa12.51□□□□□ -0.41
ECHDC3-204ENST00000495787 FDPSP14324 419 aaKnown RBP12.51□□□□□ -0.41
ECHDC3-204ENST00000495787 RPS12P25398 132 aaKnown RBP12.51□□□□□ -0.41
ECHDC3-204ENST00000495787 CDC27P30260 824 aa12.51□□□□□ -0.41
ECHDC3-204ENST00000495787 ADD1P35611 737 aaKnown RBP12.51□□□□□ -0.41
ECHDC3-204ENST00000495787 ZNF157P51786 506 aaPredicted RBP12.51□□□□□ -0.41
ECHDC3-204ENST00000495787 RTN1Q16799 776 aa12.51□□□□□ -0.41
ECHDC3-204ENST00000495787 RGS22Q8NE09 1264 aa12.51□□□□□ -0.41
ECHDC3-204ENST00000495787 NEDD1Q8NHV4 660 aa12.51□□□□□ -0.41
ECHDC3-204ENST00000495787 MYL10Q9BUA6 226 aa12.51□□□□□ -0.41
ECHDC3-204ENST00000495787 TDRD3Q9H7E2 651 aaKnown RBP12.51□□□□□ -0.41
ECHDC3-204ENST00000495787 FAM217BQ9NTX9 383 aaPredicted RBP12.51□□□□□ -0.41
ECHDC3-204ENST00000495787 RNF186Q9NXI6 227 aa12.51□□□□□ -0.41
ECHDC3-204ENST00000495787 TMOD2Q9NZR1 351 aa12.51□□□□□ -0.41
ECHDC3-204ENST00000495787 FAM198AQ9UFP1 575 aa12.51□□□□□ -0.41
ECHDC3-204ENST00000495787 SERPINB13Q9UIV8 391 aa12.51□□□□□ -0.41
ECHDC3-204ENST00000495787 ZBTB12Q9Y330 459 aaPredicted RBP12.51□□□□□ -0.41
ECHDC3-204ENST00000495787 ATP6V1DQ9Y5K8 247 aa12.51□□□□□ -0.41
ECHDC3-204ENST00000495787 NMT2O60551 498 aa12.5□□□□□ -0.41
ECHDC3-204ENST00000495787 TRPA1O75762 1119 aa12.5□□□□□ -0.41
ECHDC3-204ENST00000495787 RXRAP19793 462 aa12.5□□□□□ -0.41
ECHDC3-204ENST00000495787 NTRK3Q16288 839 aa12.5□□□□□ -0.41
ECHDC3-204ENST00000495787 RCSD1Q6JBY9 416 aa12.5□□□□□ -0.41
ECHDC3-204ENST00000495787 DLK2Q6UY11 383 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms