RNA–Protein interactions for RNA: ENST00000495784.1

CLCNKA-207, Transcript of chloride voltage-gated channel Ka, humanhuman

TSL 5

Gene CLCNKA, Length 727 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-207ENST00000495784 MAPK4P31152 587 aa22.28■■□□□ 1.16
CLCNKA-207ENST00000495784 ERVK-9P63128 1117 aa22.28■■□□□ 1.16
CLCNKA-207ENST00000495784 ERVK-24P63145 666 aa22.28■■□□□ 1.16
CLCNKA-207ENST00000495784 USP17L24Q0WX57 530 aa22.28■■□□□ 1.16
CLCNKA-207ENST00000495784 PDE3AQ14432 1141 aa22.28■■□□□ 1.16
CLCNKA-207ENST00000495784 NUDT12Q9BQG2 462 aa22.28■■□□□ 1.16
CLCNKA-207ENST00000495784 KIAA1683Q9H0B3 1180 aa22.28■■□□□ 1.16
CLCNKA-207ENST00000495784 BOLA2Q9H3K6 86 aa22.28■■□□□ 1.16
CLCNKA-207ENST00000495784 PAG1Q9NWQ8 432 aa22.28■■□□□ 1.16
CLCNKA-207ENST00000495784 CEP290O15078 2479 aa22.28■■□□□ 1.16
CLCNKA-207ENST00000495784 LCORLQ8N3X6 602 aa22.27■■□□□ 1.16
CLCNKA-207ENST00000495784 ACER1Q8TDN7 264 aa22.27■■□□□ 1.16
CLCNKA-207ENST00000495784 SDR42E1Q8WUS8 393 aa22.27■■□□□ 1.16
CLCNKA-207ENST00000495784 DDX24Q9GZR7 859 aaKnown RBP eCLIP22.27■■□□□ 1.16
CLCNKA-207ENST00000495784 CRISPLD2Q9H0B8 497 aa22.27■■□□□ 1.16
CLCNKA-207ENST00000495784 CWC22Q9HCG8 908 aaKnown RBP22.27■■□□□ 1.16
CLCNKA-207ENST00000495784 HMX1Q9NP08 348 aaPredicted RBP22.27■■□□□ 1.16
CLCNKA-207ENST00000495784 NR2E3Q9Y5X4 410 aa22.27■■□□□ 1.16
CLCNKA-207ENST00000495784 ATP5JP18859 108 aa22.26■■□□□ 1.15
CLCNKA-207ENST00000495784 GABPAQ06546 454 aa22.26■■□□□ 1.15
CLCNKA-207ENST00000495784 RPTORQ8N122 1335 aa22.26■■□□□ 1.15
CLCNKA-207ENST00000495784 MPHOSPH10O00566 681 aaKnown RBP22.25■■□□□ 1.15
CLCNKA-207ENST00000495784 VCAM1P19320 739 aa22.25■■□□□ 1.15
CLCNKA-207ENST00000495784 TRIM32Q13049 653 aa22.25■■□□□ 1.15
CLCNKA-207ENST00000495784 Q3C1V9 767 aa22.25■■□□□ 1.15
CLCNKA-207ENST00000495784 TRIB2Q92519 343 aa22.25■■□□□ 1.15
CLCNKA-207ENST00000495784 HAUS7Q99871 368 aa22.25■■□□□ 1.15
CLCNKA-207ENST00000495784 PORCNQ9H237 461 aa22.25■■□□□ 1.15
CLCNKA-207ENST00000495784 ARMT1Q9H993 441 aa22.25■■□□□ 1.15
CLCNKA-207ENST00000495784 DCP1AQ9NPI6 582 aaPredicted RBP22.25■■□□□ 1.15
CLCNKA-207ENST00000495784 NAV1Q8NEY1 1877 aa22.25■■□□□ 1.15
CLCNKA-207ENST00000495784 DDX60LQ5H9U9 1706 aaKnown RBP22.25■■□□□ 1.15
CLCNKA-207ENST00000495784 XRCC5P13010 732 aaKnown RBP22.24■■□□□ 1.15
CLCNKA-207ENST00000495784 ADD2P35612 726 aa22.24■■□□□ 1.15
CLCNKA-207ENST00000495784 CCNA1P78396 465 aa22.24■■□□□ 1.15
CLCNKA-207ENST00000495784 SEPT2Q15019 361 aa22.24■■□□□ 1.15
CLCNKA-207ENST00000495784 C20orf194Q5TEA3 1177 aa22.24■■□□□ 1.15
CLCNKA-207ENST00000495784 CHRDL2Q6WN34 429 aa22.24■■□□□ 1.15
CLCNKA-207ENST00000495784 CATSPERGQ6ZRH7 1159 aa22.24■■□□□ 1.15
CLCNKA-207ENST00000495784 PLEKHH3Q7Z736 793 aa22.24■■□□□ 1.15
CLCNKA-207ENST00000495784 LRRCC1Q9C099 1032 aa22.24■■□□□ 1.15
CLCNKA-207ENST00000495784 RABGAP1Q9Y3P9 1069 aa22.24■■□□□ 1.15
CLCNKA-207ENST00000495784 MBD4O95243 580 aa22.23■■□□□ 1.15
CLCNKA-207ENST00000495784 CYP2D6P10635 497 aa22.23■■□□□ 1.15
CLCNKA-207ENST00000495784 ZKSCAN1P17029 563 aaPredicted RBP22.23■■□□□ 1.15
CLCNKA-207ENST00000495784 GUCY1A2P33402 732 aa22.23■■□□□ 1.15
CLCNKA-207ENST00000495784 RGS2P41220 211 aa22.23■■□□□ 1.15
CLCNKA-207ENST00000495784 EVX2Q03828 476 aa22.23■■□□□ 1.15
CLCNKA-207ENST00000495784 POTEEQ6S8J3 1075 aa22.23■■□□□ 1.15
CLCNKA-207ENST00000495784 GPR142Q7Z601 462 aa22.23■■□□□ 1.15
CLCNKA-207ENST00000495784 TRMT44Q8IYL2 757 aaKnown RBP22.23■■□□□ 1.15
CLCNKA-207ENST00000495784 PAWRQ96IZ0 340 aaKnown RBP22.23■■□□□ 1.15
CLCNKA-207ENST00000495784 EVI5O60447 810 aa22.22■■□□□ 1.15
CLCNKA-207ENST00000495784 GLRX3O76003 335 aaKnown RBP22.22■■□□□ 1.15
CLCNKA-207ENST00000495784 PRKAR2AP13861 404 aaKnown RBP22.22■■□□□ 1.15
CLCNKA-207ENST00000495784 FXR1P51114 621 aaKnown RBP eCLIP22.22■■□□□ 1.15
CLCNKA-207ENST00000495784 SLFNL1Q499Z3 407 aa22.22■■□□□ 1.15
CLCNKA-207ENST00000495784 NECAB2Q7Z6G3 386 aa22.22■■□□□ 1.15
CLCNKA-207ENST00000495784 RPAP3Q9H6T3 665 aaPredicted RBP22.22■■□□□ 1.15
CLCNKA-207ENST00000495784 ATP8A2Q9NTI2 1148 aa22.22■■□□□ 1.15
CLCNKA-207ENST00000495784 SWAP70Q9UH65 585 aa22.22■■□□□ 1.15
CLCNKA-207ENST00000495784 PRKAB2O43741 272 aa22.21■■□□□ 1.15
CLCNKA-207ENST00000495784 WDR78Q5VTH9 848 aa22.21■■□□□ 1.15
CLCNKA-207ENST00000495784 AMOTL1Q8IY63 956 aa22.21■■□□□ 1.15
CLCNKA-207ENST00000495784 ANKLE1Q8NAG6 615 aa22.21■■□□□ 1.15
CLCNKA-207ENST00000495784 SLC44A5Q8NCS7 719 aa22.21■■□□□ 1.15
CLCNKA-207ENST00000495784 DDRGK1Q96HY6 314 aa22.21■■□□□ 1.15
CLCNKA-207ENST00000495784 PLXNB2O15031 1838 aa22.21■■□□□ 1.15
CLCNKA-207ENST00000495784 SMARCA5O60264 1052 aaPredicted RBP22.2■■□□□ 1.14
CLCNKA-207ENST00000495784 CNMDO75829 334 aa22.2■■□□□ 1.14
CLCNKA-207ENST00000495784 UBE3CQ15386 1083 aa22.2■■□□□ 1.14
CLCNKA-207ENST00000495784 MORN1Q5T089 497 aa22.2■■□□□ 1.14
CLCNKA-207ENST00000495784 MAP3K21Q5TCX8 1036 aa22.2■■□□□ 1.14
CLCNKA-207ENST00000495784 ZSCAN25Q6NSZ9 544 aa22.2■■□□□ 1.14
CLCNKA-207ENST00000495784 TMEM179Q6ZVK1 233 aa22.2■■□□□ 1.14
CLCNKA-207ENST00000495784 DIS3LQ8TF46 1054 aaKnown RBP22.2■■□□□ 1.14
CLCNKA-207ENST00000495784 USP6NLQ92738 828 aa22.2■■□□□ 1.14
CLCNKA-207ENST00000495784 APBA2Q99767 749 aa22.2■■□□□ 1.14
CLCNKA-207ENST00000495784 LBX2Q6XYB7 198 aa22.19■■□□□ 1.14
CLCNKA-207ENST00000495784 DYNLL2Q96FJ2 89 aa22.19■■□□□ 1.14
CLCNKA-207ENST00000495784 A0A1W2PRG0 241 aa22.18■■□□□ 1.14
CLCNKA-207ENST00000495784 SPDYE16A6NNV3 312 aaPredicted RBP22.18■■□□□ 1.14
CLCNKA-207ENST00000495784 MAP2K5Q13163 448 aa22.18■■□□□ 1.14
CLCNKA-207ENST00000495784 TANGO6Q9C0B7 1094 aa22.18■■□□□ 1.14
CLCNKA-207ENST00000495784 RBM27Q9P2N5 1060 aaKnown RBP22.18■■□□□ 1.14
CLCNKA-207ENST00000495784 IVNS1ABPQ9Y6Y0 642 aa22.18■■□□□ 1.14
CLCNKA-207ENST00000495784 TRIOBPQ9H2D6 2365 aa22.17■■□□□ 1.14
CLCNKA-207ENST00000495784 CHGBP05060 677 aa22.17■■□□□ 1.14
CLCNKA-207ENST00000495784 CACNB2Q08289 660 aaPredicted RBP22.17■■□□□ 1.14
CLCNKA-207ENST00000495784 CCL14Q16627 93 aa22.17■■□□□ 1.14
CLCNKA-207ENST00000495784 NBPF3Q9H094 633 aa22.17■■□□□ 1.14
CLCNKA-207ENST00000495784 ARHGEF10LQ9HCE6 1279 aa22.17■■□□□ 1.14
CLCNKA-207ENST00000495784 ECHDC1Q9NTX5 307 aa22.17■■□□□ 1.14
CLCNKA-207ENST00000495784 BTBD7Q9P203 1132 aa22.17■■□□□ 1.14
CLCNKA-207ENST00000495784 OGDHLQ9ULD0 1010 aa22.17■■□□□ 1.14
CLCNKA-207ENST00000495784 SLC4A4Q9Y6R1 1079 aa22.17■■□□□ 1.14
CLCNKA-207ENST00000495784 SLC15A5A6NIM6 579 aa22.16■■□□□ 1.14
CLCNKA-207ENST00000495784 USP17L12C9JPN9 530 aa22.16■■□□□ 1.14
CLCNKA-207ENST00000495784 USP17L21D6R901 530 aa22.16■■□□□ 1.14
CLCNKA-207ENST00000495784 AKR1B1P15121 316 aa22.16■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms