RNA–Protein interactions for RNA: ENST00000495755.1

VPS52-221, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 453 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-221ENST00000495755 ADCY3O60266 1144 aa8.69□□□□□ -1.02
VPS52-221ENST00000495755 PEX10O60683 326 aa8.69□□□□□ -1.02
VPS52-221ENST00000495755 GJB1P08034 283 aa8.69□□□□□ -1.02
VPS52-221ENST00000495755 CCL5P13501 91 aa8.69□□□□□ -1.02
VPS52-221ENST00000495755 USP14P54578 494 aa8.69□□□□□ -1.02
VPS52-221ENST00000495755 USP17L24Q0WX57 530 aa8.69□□□□□ -1.02
VPS52-221ENST00000495755 SEPT2Q15019 361 aa8.69□□□□□ -1.02
VPS52-221ENST00000495755 C12orf60Q5U649 245 aa8.69□□□□□ -1.02
VPS52-221ENST00000495755 PRPF38BQ5VTL8 546 aaKnown RBP8.69□□□□□ -1.02
VPS52-221ENST00000495755 CATSPERGQ6ZRH7 1159 aa8.69□□□□□ -1.02
VPS52-221ENST00000495755 SIAH1Q8IUQ4 282 aa8.69□□□□□ -1.02
VPS52-221ENST00000495755 SLC44A5Q8NCS7 719 aa8.69□□□□□ -1.02
VPS52-221ENST00000495755 GPRC5AQ8NFJ5 357 aa8.69□□□□□ -1.02
VPS52-221ENST00000495755 DYNLL2Q96FJ2 89 aa8.69□□□□□ -1.02
VPS52-221ENST00000495755 FEZ1Q99689 392 aa8.69□□□□□ -1.02
VPS52-221ENST00000495755 TXNRD2Q9NNW7 524 aa8.69□□□□□ -1.02
VPS52-221ENST00000495755 SWAP70Q9UH65 585 aa8.69□□□□□ -1.02
VPS52-221ENST00000495755 SLC4A4Q9Y6R1 1079 aa8.69□□□□□ -1.02
VPS52-221ENST00000495755 NAV1Q8NEY1 1877 aa8.68□□□□□ -1.02
VPS52-221ENST00000495755 CYP2D7A0A087X1C5 515 aa8.68□□□□□ -1.02
VPS52-221ENST00000495755 RNF113AO15541 343 aaKnown RBP8.68□□□□□ -1.02
VPS52-221ENST00000495755 CNMDO75829 334 aa8.68□□□□□ -1.02
VPS52-221ENST00000495755 INHAP05111 366 aa8.68□□□□□ -1.02
VPS52-221ENST00000495755 ELNP15502 786 aa8.68□□□□□ -1.02
VPS52-221ENST00000495755 VCAM1P19320 739 aa8.68□□□□□ -1.02
VPS52-221ENST00000495755 GJA8P48165 433 aa8.68□□□□□ -1.02
VPS52-221ENST00000495755 UBXN2AP68543 259 aa8.68□□□□□ -1.02
VPS52-221ENST00000495755 ZYXQ15942 572 aaKnown RBP8.68□□□□□ -1.02
VPS52-221ENST00000495755 Q3C1V9 767 aa8.68□□□□□ -1.02
VPS52-221ENST00000495755 CTR9Q6PD62 1173 aa8.68□□□□□ -1.02
VPS52-221ENST00000495755 TMEM179Q6ZVK1 233 aa8.68□□□□□ -1.02
VPS52-221ENST00000495755 C16orf86Q6ZW13 317 aa8.68□□□□□ -1.02
VPS52-221ENST00000495755 PI4K2BQ8TCG2 481 aa8.68□□□□□ -1.02
VPS52-221ENST00000495755 OTUD7AQ8TE49 926 aaPredicted RBP8.68□□□□□ -1.02
VPS52-221ENST00000495755 GTF3C2Q8WUA4 911 aaPredicted RBP8.68□□□□□ -1.02
VPS52-221ENST00000495755 OSBP2Q969R2 916 aa8.68□□□□□ -1.02
VPS52-221ENST00000495755 SHISA4Q96DD7 197 aa8.68□□□□□ -1.02
VPS52-221ENST00000495755 YTHDC1Q96MU7 727 aaKnown RBP8.68□□□□□ -1.02
VPS52-221ENST00000495755 RNF208Q9H0X6 261 aa8.68□□□□□ -1.02
VPS52-221ENST00000495755 UNC93B1Q9H1C4 597 aa8.68□□□□□ -1.02
VPS52-221ENST00000495755 BIN2Q9UBW5 565 aaPredicted RBP8.68□□□□□ -1.02
VPS52-221ENST00000495755 TTC41PQ6P2S7 1318 aa8.68□□□□□ -1.02
VPS52-221ENST00000495755 GSG1L2A8MUP6 293 aa8.67□□□□□ -1.02
VPS52-221ENST00000495755 MPHOSPH10O00566 681 aaKnown RBP8.67□□□□□ -1.02
VPS52-221ENST00000495755 ZFYP08048 801 aaPredicted RBP8.67□□□□□ -1.02
VPS52-221ENST00000495755 AKR1B1P15121 316 aa8.67□□□□□ -1.02
VPS52-221ENST00000495755 MAPK4P31152 587 aa8.67□□□□□ -1.02
VPS52-221ENST00000495755 CDK8P49336 464 aa8.67□□□□□ -1.02
VPS52-221ENST00000495755 ERVK-9P63128 1117 aa8.67□□□□□ -1.02
VPS52-221ENST00000495755 ERVK-24P63145 666 aa8.67□□□□□ -1.02
VPS52-221ENST00000495755 HDAC1Q13547 482 aaPredicted RBP8.67□□□□□ -1.02
VPS52-221ENST00000495755 SBK1Q52WX2 424 aa8.67□□□□□ -1.02
VPS52-221ENST00000495755 KIAA1755Q5JYT7 1200 aa8.67□□□□□ -1.02
VPS52-221ENST00000495755 GIMAP6Q6P9H5 292 aa8.67□□□□□ -1.02
VPS52-221ENST00000495755 LBX2Q6XYB7 198 aa8.67□□□□□ -1.02
VPS52-221ENST00000495755 DNAH12Q6ZR08 3092 aa8.67□□□□□ -1.02
VPS52-221ENST00000495755 UBE2Q1Q7Z7E8 422 aa8.67□□□□□ -1.02
VPS52-221ENST00000495755 NKX2-3Q8TAU0 364 aa8.67□□□□□ -1.02
VPS52-221ENST00000495755 APPBP2Q92624 585 aa8.67□□□□□ -1.02
VPS52-221ENST00000495755 USP6NLQ92738 828 aa8.67□□□□□ -1.02
VPS52-221ENST00000495755 DDRGK1Q96HY6 314 aa8.67□□□□□ -1.02
VPS52-221ENST00000495755 CCDC17Q96LX7 622 aa8.67□□□□□ -1.02
VPS52-221ENST00000495755 SALL3Q9BXA9 1300 aa8.67□□□□□ -1.02
VPS52-221ENST00000495755 RABGAP1Q9Y3P9 1069 aa8.67□□□□□ -1.02
VPS52-221ENST00000495755 DOCK3Q8IZD9 2030 aa8.66□□□□□ -1.02
VPS52-221ENST00000495755 ERC2O15083 957 aa8.66□□□□□ -1.02
VPS52-221ENST00000495755 GLRX3O76003 335 aaKnown RBP8.66□□□□□ -1.02
VPS52-221ENST00000495755 SGPL1O95470 568 aa8.66□□□□□ -1.02
VPS52-221ENST00000495755 MX1P20591 662 aa8.66□□□□□ -1.02
VPS52-221ENST00000495755 AAMPQ13685 434 aa8.66□□□□□ -1.02
VPS52-221ENST00000495755 MORN1Q5T089 497 aa8.66□□□□□ -1.02
VPS52-221ENST00000495755 AMOTL1Q8IY63 956 aa8.66□□□□□ -1.02
VPS52-221ENST00000495755 GCC1Q96CN9 775 aa8.66□□□□□ -1.02
VPS52-221ENST00000495755 PAGR1Q9BTK6 254 aa8.66□□□□□ -1.02
VPS52-221ENST00000495755 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.66□□□□□ -1.02
VPS52-221ENST00000495755 PORCNQ9H237 461 aa8.66□□□□□ -1.02
VPS52-221ENST00000495755 RPAP3Q9H6T3 665 aaPredicted RBP8.66□□□□□ -1.02
VPS52-221ENST00000495755 PAK6Q9NQU5 681 aaPredicted RBP8.66□□□□□ -1.02
VPS52-221ENST00000495755 ARPP21Q9UBL0 812 aaPredicted RBP8.66□□□□□ -1.02
VPS52-221ENST00000495755 TMX2Q9Y320 296 aa8.66□□□□□ -1.02
VPS52-221ENST00000495755 MYH7P12883 1935 aa8.66□□□□□ -1.02
VPS52-221ENST00000495755 BAZ2AQ9UIF9 1905 aaKnown RBP8.65□□□□□ -1.02
VPS52-221ENST00000495755 SPDYE16A6NNV3 312 aaPredicted RBP8.65□□□□□ -1.02
VPS52-221ENST00000495755 PATL2C9JE40 543 aaKnown RBP8.65□□□□□ -1.02
VPS52-221ENST00000495755 M0R2C6 588 aa8.65□□□□□ -1.02
VPS52-221ENST00000495755 GPAA1O43292 621 aa8.65□□□□□ -1.02
VPS52-221ENST00000495755 HMGCRP04035 888 aa8.65□□□□□ -1.02
VPS52-221ENST00000495755 XRCC5P13010 732 aaKnown RBP8.65□□□□□ -1.02
VPS52-221ENST00000495755 CAPN2P17655 700 aa8.65□□□□□ -1.02
VPS52-221ENST00000495755 GNAT2P19087 354 aa8.65□□□□□ -1.02
VPS52-221ENST00000495755 CYP2B6P20813 491 aa8.65□□□□□ -1.02
VPS52-221ENST00000495755 ICA1Q05084 483 aa8.65□□□□□ -1.02
VPS52-221ENST00000495755 COG2Q14746 738 aa8.65□□□□□ -1.02
VPS52-221ENST00000495755 ANKRD45Q5TZF3 282 aa8.65□□□□□ -1.02
VPS52-221ENST00000495755 GPR142Q7Z601 462 aa8.65□□□□□ -1.02
VPS52-221ENST00000495755 PLEKHH3Q7Z736 793 aa8.65□□□□□ -1.02
VPS52-221ENST00000495755 CLEC10AQ8IUN9 316 aa8.65□□□□□ -1.02
VPS52-221ENST00000495755 U2AF1L4Q8WU68 220 aaKnown RBP8.65□□□□□ -1.02
VPS52-221ENST00000495755 SOCS4Q8WXH5 440 aa8.65□□□□□ -1.02
VPS52-221ENST00000495755 LPAR1Q92633 364 aa8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms