RNA–Protein interactions for RNA: ENST00000495666.5

RFTN1-211, Transcript of raftlin, lipid raft linker 1, humanhuman

TSL 4

Gene RFTN1, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFTN1-211ENST00000495666 PORCNQ9H237 461 aa12.94□□□□□ -0.34
RFTN1-211ENST00000495666 C19orf81C9J6K1 198 aa12.93□□□□□ -0.34
RFTN1-211ENST00000495666 GJA8P48165 433 aa12.93□□□□□ -0.34
RFTN1-211ENST00000495666 CHRDL2Q6WN34 429 aa12.93□□□□□ -0.34
RFTN1-211ENST00000495666 GPRC5AQ8NFJ5 357 aa12.93□□□□□ -0.34
RFTN1-211ENST00000495666 NKX2-3Q8TAU0 364 aa12.93□□□□□ -0.34
RFTN1-211ENST00000495666 DIS3LQ8TF46 1054 aaKnown RBP12.93□□□□□ -0.34
RFTN1-211ENST00000495666 TANGO6Q9C0B7 1094 aa12.93□□□□□ -0.34
RFTN1-211ENST00000495666 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.93□□□□□ -0.34
RFTN1-211ENST00000495666 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.93□□□□□ -0.34
RFTN1-211ENST00000495666 CHMP4BQ9H444 224 aaKnown RBP12.93□□□□□ -0.34
RFTN1-211ENST00000495666 RPAP3Q9H6T3 665 aaPredicted RBP12.93□□□□□ -0.34
RFTN1-211ENST00000495666 DCP1AQ9NPI6 582 aaPredicted RBP12.93□□□□□ -0.34
RFTN1-211ENST00000495666 TCRBV5S4A2TA0A5A2 114 aa12.92□□□□□ -0.34
RFTN1-211ENST00000495666 HMGCRP04035 888 aa12.92□□□□□ -0.34
RFTN1-211ENST00000495666 VCAM1P19320 739 aa12.92□□□□□ -0.34
RFTN1-211ENST00000495666 ADD2P35612 726 aa12.92□□□□□ -0.34
RFTN1-211ENST00000495666 ERVK-9P63128 1117 aa12.92□□□□□ -0.34
RFTN1-211ENST00000495666 ERVK-24P63145 666 aa12.92□□□□□ -0.34
RFTN1-211ENST00000495666 CCL14Q16627 93 aa12.92□□□□□ -0.34
RFTN1-211ENST00000495666 Q3C1V9 767 aa12.92□□□□□ -0.34
RFTN1-211ENST00000495666 HABP4Q5JVS0 413 aaKnown RBP12.92□□□□□ -0.34
RFTN1-211ENST00000495666 TATDN1Q6P1N9 297 aa12.92□□□□□ -0.34
RFTN1-211ENST00000495666 METTL16Q86W50 562 aaKnown RBP12.92□□□□□ -0.34
RFTN1-211ENST00000495666 CERS3Q8IU89 383 aa12.92□□□□□ -0.34
RFTN1-211ENST00000495666 SPICE1Q8N0Z3 855 aa12.92□□□□□ -0.34
RFTN1-211ENST00000495666 TRIB2Q92519 343 aa12.92□□□□□ -0.34
RFTN1-211ENST00000495666 COLQQ9Y215 455 aaPredicted RBP12.92□□□□□ -0.34
RFTN1-211ENST00000495666 SLC4A4Q9Y6R1 1079 aa12.92□□□□□ -0.34
RFTN1-211ENST00000495666 ALPK3Q96L96 1907 aa12.92□□□□□ -0.34
RFTN1-211ENST00000495666 USP17L15C9J2P7 530 aa12.91□□□□□ -0.34
RFTN1-211ENST00000495666 USP17L13C9JLJ4 530 aa12.91□□□□□ -0.34
RFTN1-211ENST00000495666 USP17L11C9JVI0 530 aa12.91□□□□□ -0.34
RFTN1-211ENST00000495666 USP17L18D6R9N7 530 aa12.91□□□□□ -0.34
RFTN1-211ENST00000495666 USP17L22D6RA61 530 aa12.91□□□□□ -0.34
RFTN1-211ENST00000495666 USP17L17D6RBQ6 530 aa12.91□□□□□ -0.34
RFTN1-211ENST00000495666 USP17L19D6RCP7 530 aa12.91□□□□□ -0.34
RFTN1-211ENST00000495666 USP17L20D6RJB6 530 aa12.91□□□□□ -0.34
RFTN1-211ENST00000495666 SGPL1O95470 568 aa12.91□□□□□ -0.34
RFTN1-211ENST00000495666 AKR1B1P15121 316 aa12.91□□□□□ -0.34
RFTN1-211ENST00000495666 ATP5JP18859 108 aa12.91□□□□□ -0.34
RFTN1-211ENST00000495666 USP17L24Q0WX57 530 aa12.91□□□□□ -0.34
RFTN1-211ENST00000495666 IRF5Q13568 498 aa12.91□□□□□ -0.34
RFTN1-211ENST00000495666 PLS1Q14651 629 aa12.91□□□□□ -0.34
RFTN1-211ENST00000495666 GPR142Q7Z601 462 aa12.91□□□□□ -0.34
RFTN1-211ENST00000495666 AMOTL1Q8IY63 956 aa12.91□□□□□ -0.34
RFTN1-211ENST00000495666 GCC1Q96CN9 775 aa12.91□□□□□ -0.34
RFTN1-211ENST00000495666 PAWRQ96IZ0 340 aaKnown RBP12.91□□□□□ -0.34
RFTN1-211ENST00000495666 HAUS7Q99871 368 aa12.91□□□□□ -0.34
RFTN1-211ENST00000495666 NUDT12Q9BQG2 462 aa12.91□□□□□ -0.34
RFTN1-211ENST00000495666 HTATIP2Q9BUP3 242 aa12.91□□□□□ -0.34
RFTN1-211ENST00000495666 EHD4Q9H223 541 aa12.91□□□□□ -0.34
RFTN1-211ENST00000495666 RBPJLQ9UBG7 517 aa12.91□□□□□ -0.34
RFTN1-211ENST00000495666 MYCNP04198 464 aaPredicted RBP12.9□□□□□ -0.34
RFTN1-211ENST00000495666 PRKAR2AP13861 404 aaKnown RBP12.9□□□□□ -0.34
RFTN1-211ENST00000495666 ZKSCAN1P17029 563 aaPredicted RBP12.9□□□□□ -0.34
RFTN1-211ENST00000495666 HOXA7P31268 230 aaPredicted RBP12.9□□□□□ -0.34
RFTN1-211ENST00000495666 GUCY1A2P33402 732 aa12.9□□□□□ -0.34
RFTN1-211ENST00000495666 PXYLP1Q8TE99 480 aa12.9□□□□□ -0.34
RFTN1-211ENST00000495666 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.9□□□□□ -0.34
RFTN1-211ENST00000495666 CHMP4CQ96CF2 233 aa12.9□□□□□ -0.34
RFTN1-211ENST00000495666 DDRGK1Q96HY6 314 aa12.9□□□□□ -0.34
RFTN1-211ENST00000495666 GPATCH3Q96I76 525 aa12.9□□□□□ -0.34
RFTN1-211ENST00000495666 HMX1Q9NP08 348 aaPredicted RBP12.9□□□□□ -0.34
RFTN1-211ENST00000495666 MORF4L1Q9UBU8 362 aa12.9□□□□□ -0.34
RFTN1-211ENST00000495666 A0A1W2PRG0 241 aa12.89□□□□□ -0.35
RFTN1-211ENST00000495666 MINDY4BA8MYZ0 360 aa12.89□□□□□ -0.35
RFTN1-211ENST00000495666 USP17L12C9JPN9 530 aa12.89□□□□□ -0.35
RFTN1-211ENST00000495666 USP17L21D6R901 530 aa12.89□□□□□ -0.35
RFTN1-211ENST00000495666 EVI5O60447 810 aa12.89□□□□□ -0.35
RFTN1-211ENST00000495666 USP14P54578 494 aa12.89□□□□□ -0.35
RFTN1-211ENST00000495666 ICA1Q05084 483 aa12.89□□□□□ -0.35
RFTN1-211ENST00000495666 POTEEQ6S8J3 1075 aa12.89□□□□□ -0.35
RFTN1-211ENST00000495666 PPP4R3CPQ6ZMV5 832 aa12.89□□□□□ -0.35
RFTN1-211ENST00000495666 PLEKHH3Q7Z736 793 aa12.89□□□□□ -0.35
RFTN1-211ENST00000495666 C7orf61Q8IZ16 206 aa12.89□□□□□ -0.35
RFTN1-211ENST00000495666 PUS7LQ9H0K6 701 aaKnown RBP12.89□□□□□ -0.35
RFTN1-211ENST00000495666 GINM1Q9NU53 330 aa12.89□□□□□ -0.35
RFTN1-211ENST00000495666 BTBD7Q9P203 1132 aa12.89□□□□□ -0.35
RFTN1-211ENST00000495666 GJD2Q9UKL4 321 aa12.89□□□□□ -0.35
RFTN1-211ENST00000495666 ISY1Q9ULR0 285 aaKnown RBP12.89□□□□□ -0.35
RFTN1-211ENST00000495666 COL11A1P12107 1806 aaPredicted RBP12.89□□□□□ -0.35
RFTN1-211ENST00000495666 TRIOBPQ9H2D6 2365 aa12.89□□□□□ -0.35
RFTN1-211ENST00000495666 FRMPD3Q5JV73 1810 aa12.88□□□□□ -0.35
RFTN1-211ENST00000495666 CNMDO75829 334 aa12.88□□□□□ -0.35
RFTN1-211ENST00000495666 APPP05067 770 aa12.88□□□□□ -0.35
RFTN1-211ENST00000495666 CNGA1P29973 690 aa12.88□□□□□ -0.35
RFTN1-211ENST00000495666 CCND3P30281 292 aaPredicted RBP12.88□□□□□ -0.35
RFTN1-211ENST00000495666 MAPK4P31152 587 aa12.88□□□□□ -0.35
RFTN1-211ENST00000495666 SLC4A3P48751 1232 aa12.88□□□□□ -0.35
RFTN1-211ENST00000495666 GABPAQ06546 454 aa12.88□□□□□ -0.35
RFTN1-211ENST00000495666 KIAA1755Q5JYT7 1200 aa12.88□□□□□ -0.35
RFTN1-211ENST00000495666 CATSPERGQ6ZRH7 1159 aa12.88□□□□□ -0.35
RFTN1-211ENST00000495666 OTUD7AQ8TE49 926 aaPredicted RBP12.88□□□□□ -0.35
RFTN1-211ENST00000495666 SOCS4Q8WXH5 440 aa12.88□□□□□ -0.35
RFTN1-211ENST00000495666 KIAA1683Q9H0B3 1180 aa12.88□□□□□ -0.35
RFTN1-211ENST00000495666 ECHDC1Q9NTX5 307 aa12.88□□□□□ -0.35
RFTN1-211ENST00000495666 ZMYND8Q9ULU4 1186 aaPredicted RBP12.88□□□□□ -0.35
RFTN1-211ENST00000495666 IVNS1ABPQ9Y6Y0 642 aa12.88□□□□□ -0.35
RFTN1-211ENST00000495666 SPDYE16A6NNV3 312 aaPredicted RBP12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms