RNA–Protein interactions for RNA: ENST00000495484.5

PCDH15-223, Transcript of protocadherin related 15, human

TSL 5 BASIC

Gene PCDH15, Length 1,896 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PCDH15-223	ENST00000495484	CIZ1	Q9ULV3	898 aa	Predicted RBP	10.79	□□□□□ -0.68
PCDH15-223	ENST00000495484	STX8	Q9UNK0	236 aa		10.79	□□□□□ -0.68
PCDH15-223	ENST00000495484	SMC3	Q9UQE7	1217 aa		10.79	□□□□□ -0.68
PCDH15-223	ENST00000495484	ASTN2	O75129	1339 aa	Predicted RBP	10.79	□□□□□ -0.68
PCDH15-223	ENST00000495484	FOCAD	Q5VW36	1801 aa		10.79	□□□□□ -0.68
PCDH15-223	ENST00000495484	GOLGA8A	A7E2F4	631 aa		10.78	□□□□□ -0.68
PCDH15-223	ENST00000495484	NMT2	O60551	498 aa		10.78	□□□□□ -0.68
PCDH15-223	ENST00000495484	TTLL1	O95922	423 aa		10.78	□□□□□ -0.68
PCDH15-223	ENST00000495484	HMGN5	P82970	282 aa	Known RBP	10.78	□□□□□ -0.68
PCDH15-223	ENST00000495484	SCRN1	Q12765	414 aa		10.78	□□□□□ -0.68
PCDH15-223	ENST00000495484	RCSD1	Q6JBY9	416 aa		10.78	□□□□□ -0.68
PCDH15-223	ENST00000495484	CEP95	Q96GE4	821 aa		10.78	□□□□□ -0.68
PCDH15-223	ENST00000495484	RBM28	Q9NW13	759 aa	Known RBP	10.78	□□□□□ -0.68
PCDH15-223	ENST00000495484	HPS5	Q9UPZ3	1129 aa		10.78	□□□□□ -0.68
PCDH15-223	ENST00000495484	LAMB1	P07942	1786 aa		10.78	□□□□□ -0.68
PCDH15-223	ENST00000495484	IGKV6D-41	A0A0C4DH26	115 aa		10.78	□□□□□ -0.68
PCDH15-223	ENST00000495484	VEGFA	P15692	232 aa	Predicted RBP	10.78	□□□□□ -0.68
PCDH15-223	ENST00000495484	KIF5B	P33176	963 aa		10.78	□□□□□ -0.68
PCDH15-223	ENST00000495484	CCT2	P78371	535 aa	Known RBP	10.78	□□□□□ -0.68
PCDH15-223	ENST00000495484	MIGA2	Q7L4E1	593 aa		10.78	□□□□□ -0.68
PCDH15-223	ENST00000495484	MICU3	Q86XE3	530 aa		10.78	□□□□□ -0.68
PCDH15-223	ENST00000495484	FANCB	Q8NB91	859 aa		10.78	□□□□□ -0.68
PCDH15-223	ENST00000495484	PNMA1	Q8ND90	353 aa		10.78	□□□□□ -0.68
PCDH15-223	ENST00000495484	GNL3	Q9BVP2	549 aa	Known RBP eCLIP	10.78	□□□□□ -0.68
PCDH15-223	ENST00000495484	ZNF341	Q9BYN7	854 aa		10.78	□□□□□ -0.68
PCDH15-223	ENST00000495484	SENP2	Q9HC62	589 aa		10.78	□□□□□ -0.68
PCDH15-223	ENST00000495484	FOXD4L1	Q9NU39	408 aa		10.78	□□□□□ -0.68
PCDH15-223	ENST00000495484	SYNPO2	Q9UMS6	1093 aa		10.78	□□□□□ -0.68
PCDH15-223	ENST00000495484	NID2	Q14112	1375 aa		10.78	□□□□□ -0.68
PCDH15-223	ENST00000495484	MYH1	P12882	1939 aa		10.77	□□□□□ -0.68
PCDH15-223	ENST00000495484	FAM196B	A6NMK8	535 aa		10.77	□□□□□ -0.69
PCDH15-223	ENST00000495484	ASNS	P08243	561 aa		10.77	□□□□□ -0.69
PCDH15-223	ENST00000495484	PDC	P20941	246 aa		10.77	□□□□□ -0.69
PCDH15-223	ENST00000495484	CAP2	P40123	477 aa		10.77	□□□□□ -0.69
PCDH15-223	ENST00000495484	GNAQ	P50148	359 aa		10.77	□□□□□ -0.69
PCDH15-223	ENST00000495484	TROAP	Q12815	778 aa		10.77	□□□□□ -0.69
PCDH15-223	ENST00000495484	RTN1	Q16799	776 aa		10.77	□□□□□ -0.69
PCDH15-223	ENST00000495484	KRT26	Q7Z3Y9	468 aa		10.77	□□□□□ -0.69
PCDH15-223	ENST00000495484	CTCFL	Q8NI51	663 aa	Predicted RBP	10.77	□□□□□ -0.69
PCDH15-223	ENST00000495484	NUP133	Q8WUM0	1156 aa		10.77	□□□□□ -0.69
PCDH15-223	ENST00000495484	TMEM47	Q9BQJ4	181 aa		10.77	□□□□□ -0.69
PCDH15-223	ENST00000495484	CHMP5	Q9NZZ3	219 aa		10.77	□□□□□ -0.69
PCDH15-223	ENST00000495484	NYAP2	Q9P242	653 aa		10.77	□□□□□ -0.69
PCDH15-223	ENST00000495484	ECM29	Q5VYK3	1845 aa		10.77	□□□□□ -0.69
PCDH15-223	ENST00000495484	CDK5RAP2	Q96SN8	1893 aa		10.76	□□□□□ -0.69
PCDH15-223	ENST00000495484	CTNND1	O60716	968 aa	Known RBP	10.76	□□□□□ -0.69
PCDH15-223	ENST00000495484	EAPP	Q56P03	285 aa	Predicted RBP	10.76	□□□□□ -0.69
PCDH15-223	ENST00000495484	NBPF12	Q5TAG4	269 aa	Predicted RBP	10.76	□□□□□ -0.69
PCDH15-223	ENST00000495484	MKL1	Q969V6	931 aa		10.76	□□□□□ -0.69
PCDH15-223	ENST00000495484	CLIP2	Q9UDT6	1046 aa		10.76	□□□□□ -0.69
PCDH15-223	ENST00000495484	POTEC	B2RU33	542 aa		10.76	□□□□□ -0.69
PCDH15-223	ENST00000495484	GH2	P01242	217 aa		10.76	□□□□□ -0.69
PCDH15-223	ENST00000495484	NF2	P35240	595 aa		10.76	□□□□□ -0.69
PCDH15-223	ENST00000495484	DDIT3	P35638	169 aa		10.76	□□□□□ -0.69
PCDH15-223	ENST00000495484	NUCB2	P80303	420 aa		10.76	□□□□□ -0.69
PCDH15-223	ENST00000495484	ICA1	Q05084	483 aa		10.76	□□□□□ -0.69
PCDH15-223	ENST00000495484	RAB3GAP1	Q15042	981 aa		10.76	□□□□□ -0.69
PCDH15-223	ENST00000495484	CDC37L1	Q7L3B6	337 aa		10.76	□□□□□ -0.69
PCDH15-223	ENST00000495484	CDAN1	Q8IWY9	1227 aa		10.76	□□□□□ -0.69
PCDH15-223	ENST00000495484	FAM184A	Q8NB25	1140 aa		10.76	□□□□□ -0.69
PCDH15-223	ENST00000495484	SMARCC2	Q8TAQ2	1214 aa		10.76	□□□□□ -0.69
PCDH15-223	ENST00000495484	LZTS2	Q9BRK4	669 aa		10.76	□□□□□ -0.69
PCDH15-223	ENST00000495484	SH2D4A	Q9H788	454 aa		10.76	□□□□□ -0.69
PCDH15-223	ENST00000495484	NCOA5	Q9HCD5	579 aa	Known RBP	10.76	□□□□□ -0.69
PCDH15-223	ENST00000495484	PHF20L1	A8MW92	1017 aa		10.75	□□□□□ -0.69
PCDH15-223	ENST00000495484	PPP1R12B	O60237	982 aa	Predicted RBP	10.75	□□□□□ -0.69
PCDH15-223	ENST00000495484	GDF11	O95390	407 aa		10.75	□□□□□ -0.69
PCDH15-223	ENST00000495484	GJB2	P29033	226 aa		10.75	□□□□□ -0.69
PCDH15-223	ENST00000495484	ADD1	P35611	737 aa	Known RBP	10.75	□□□□□ -0.69
PCDH15-223	ENST00000495484	ST3GAL1	Q11201	340 aa		10.75	□□□□□ -0.69
PCDH15-223	ENST00000495484	SEPT2	Q15019	361 aa		10.75	□□□□□ -0.69
PCDH15-223	ENST00000495484	USP48	Q86UV5	1035 aa		10.75	□□□□□ -0.69
PCDH15-223	ENST00000495484	NSUN7	Q8NE18	718 aa	Known RBP	10.75	□□□□□ -0.69
PCDH15-223	ENST00000495484	MYL10	Q9BUA6	226 aa		10.75	□□□□□ -0.69
PCDH15-223	ENST00000495484	ARHGEF10L	Q9HCE6	1279 aa		10.75	□□□□□ -0.69
PCDH15-223	ENST00000495484	ZNF112	Q9UJU3	913 aa		10.75	□□□□□ -0.69
PCDH15-223	ENST00000495484	ZBTB21	Q9ULJ3	1066 aa		10.75	□□□□□ -0.69
PCDH15-223	ENST00000495484	SCAF8	Q9UPN6	1271 aa	Known RBP	10.75	□□□□□ -0.69
PCDH15-223	ENST00000495484	PTPDC1	A2A3K4	754 aa		10.74	□□□□□ -0.69
PCDH15-223	ENST00000495484	SLURP2	P0DP57	97 aa		10.74	□□□□□ -0.69
PCDH15-223	ENST00000495484	EEF2	P13639	858 aa	Known RBP	10.74	□□□□□ -0.69
PCDH15-223	ENST00000495484	IFNAR1	P17181	557 aa		10.74	□□□□□ -0.69
PCDH15-223	ENST00000495484	RXRA	P19793	462 aa		10.74	□□□□□ -0.69
PCDH15-223	ENST00000495484	CDC27	P30260	824 aa		10.74	□□□□□ -0.69
PCDH15-223	ENST00000495484	ATP2B2	Q01814	1243 aa		10.74	□□□□□ -0.69
PCDH15-223	ENST00000495484	CCDC144CP	Q8IYA2	1237 aa		10.74	□□□□□ -0.69
PCDH15-223	ENST00000495484	TRIM22	Q8IYM9	498 aa		10.74	□□□□□ -0.69
PCDH15-223	ENST00000495484	WASF1	Q92558	559 aa		10.74	□□□□□ -0.69
PCDH15-223	ENST00000495484	RBM27	Q9P2N5	1060 aa	Known RBP	10.74	□□□□□ -0.69
PCDH15-223	ENST00000495484	CLEC11A	Q9Y240	323 aa		10.74	□□□□□ -0.69
PCDH15-223	ENST00000495484	CTDNEP1	O95476	244 aa		10.74	□□□□□ -0.69
PCDH15-223	ENST00000495484	PARP1	P09874	1014 aa	Known RBP	10.74	□□□□□ -0.69
PCDH15-223	ENST00000495484	SMARCA1	P28370	1054 aa		10.74	□□□□□ -0.69
PCDH15-223	ENST00000495484	GUCY1A2	P33402	732 aa		10.74	□□□□□ -0.69
PCDH15-223	ENST00000495484	AKAP17A	Q02040	695 aa	Known RBP	10.74	□□□□□ -0.69
PCDH15-223	ENST00000495484	SSRP1	Q08945	709 aa	Known RBP	10.74	□□□□□ -0.69
PCDH15-223	ENST00000495484	RRP1B	Q14684	758 aa	Known RBP	10.74	□□□□□ -0.69
PCDH15-223	ENST00000495484	GRM4	Q14833	912 aa		10.74	□□□□□ -0.69
PCDH15-223	ENST00000495484	RAB11FIP4	Q86YS3	637 aa		10.74	□□□□□ -0.69
PCDH15-223	ENST00000495484	RGS22	Q8NE09	1264 aa		10.74	□□□□□ -0.69

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