RNA–Protein interactions for RNA: ENST00000494620.1

SCRN1-209, Transcript of secernin 1, humanhuman

TSL 4

Gene SCRN1, Length 553 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCRN1-209ENST00000494620 SEPT2Q15019 361 aa13.18□□□□□ -0.3
SCRN1-209ENST00000494620 ZYXQ15942 572 aaKnown RBP13.18□□□□□ -0.3
SCRN1-209ENST00000494620 SLFNL1Q499Z3 407 aa13.18□□□□□ -0.3
SCRN1-209ENST00000494620 SLAIN1Q8ND83 568 aa13.18□□□□□ -0.3
SCRN1-209ENST00000494620 NKX2-3Q8TAU0 364 aa13.18□□□□□ -0.3
SCRN1-209ENST00000494620 EVI5LQ96CN4 794 aa13.18□□□□□ -0.3
SCRN1-209ENST00000494620 ZNF333Q96JL9 665 aa13.18□□□□□ -0.3
SCRN1-209ENST00000494620 C12orf42Q96LP6 360 aa13.18□□□□□ -0.3
SCRN1-209ENST00000494620 EMILIN3Q9NT22 766 aa13.18□□□□□ -0.3
SCRN1-209ENST00000494620 HOXC10Q9NYD6 342 aa13.18□□□□□ -0.3
SCRN1-209ENST00000494620 SUPT16HQ9Y5B9 1047 aaKnown RBP13.18□□□□□ -0.3
SCRN1-209ENST00000494620 GPAA1O43292 621 aa13.17□□□□□ -0.3
SCRN1-209ENST00000494620 MYCP01106 439 aaPredicted RBP13.17□□□□□ -0.3
SCRN1-209ENST00000494620 CYP2D6P10635 497 aa13.17□□□□□ -0.3
SCRN1-209ENST00000494620 TDO2P48775 406 aa13.17□□□□□ -0.3
SCRN1-209ENST00000494620 FLT3LGP49771 235 aa13.17□□□□□ -0.3
SCRN1-209ENST00000494620 PRKCZQ05513 592 aa13.17□□□□□ -0.3
SCRN1-209ENST00000494620 SBK1Q52WX2 424 aa13.17□□□□□ -0.3
SCRN1-209ENST00000494620 CTR9Q6PD62 1173 aa13.17□□□□□ -0.3
SCRN1-209ENST00000494620 TICAM2Q86XR7 235 aa13.17□□□□□ -0.3
SCRN1-209ENST00000494620 ZNF444Q8N0Y2 327 aaPredicted RBP13.17□□□□□ -0.3
SCRN1-209ENST00000494620 PXYLP1Q8TE99 480 aa13.17□□□□□ -0.3
SCRN1-209ENST00000494620 SH3TC2Q8TF17 1288 aa13.17□□□□□ -0.3
SCRN1-209ENST00000494620 DYNLL2Q96FJ2 89 aa13.17□□□□□ -0.3
SCRN1-209ENST00000494620 KANSL2Q9H9L4 492 aa13.17□□□□□ -0.3
SCRN1-209ENST00000494620 ADCY3O60266 1144 aa13.16□□□□□ -0.3
SCRN1-209ENST00000494620 CAPN2P17655 700 aa13.16□□□□□ -0.3
SCRN1-209ENST00000494620 MAPK4P31152 587 aa13.16□□□□□ -0.3
SCRN1-209ENST00000494620 CAP1Q01518 475 aa13.16□□□□□ -0.3
SCRN1-209ENST00000494620 ATP2B2Q01814 1243 aa13.16□□□□□ -0.3
SCRN1-209ENST00000494620 IRF5Q13568 498 aa13.16□□□□□ -0.3
SCRN1-209ENST00000494620 CATSPERGQ6ZRH7 1159 aa13.16□□□□□ -0.3
SCRN1-209ENST00000494620 C16orf86Q6ZW13 317 aa13.16□□□□□ -0.3
SCRN1-209ENST00000494620 PI4K2BQ8TCG2 481 aa13.16□□□□□ -0.3
SCRN1-209ENST00000494620 LPAR1Q92633 364 aa13.16□□□□□ -0.3
SCRN1-209ENST00000494620 OSBP2Q969R2 916 aa13.16□□□□□ -0.3
SCRN1-209ENST00000494620 MORF4L1Q9UBU8 362 aa13.16□□□□□ -0.3
SCRN1-209ENST00000494620 RABGAP1Q9Y3P9 1069 aa13.16□□□□□ -0.3
SCRN1-209ENST00000494620 LAMB1P07942 1786 aa13.15□□□□□ -0.3
SCRN1-209ENST00000494620 DOCK1Q14185 1865 aa13.15□□□□□ -0.3
SCRN1-209ENST00000494620 GSG1L2A8MUP6 293 aa13.15□□□□□ -0.3
SCRN1-209ENST00000494620 TRIM6-TRIM34B2RNG4 842 aa13.15□□□□□ -0.3
SCRN1-209ENST00000494620 CTGFP29279 349 aa13.15□□□□□ -0.3
SCRN1-209ENST00000494620 PDE1AP54750 535 aa13.15□□□□□ -0.3
SCRN1-209ENST00000494620 ICA1Q05084 483 aa13.15□□□□□ -0.3
SCRN1-209ENST00000494620 COG2Q14746 738 aa13.15□□□□□ -0.3
SCRN1-209ENST00000494620 SHROOM1Q2M3G4 852 aaPredicted RBP13.15□□□□□ -0.3
SCRN1-209ENST00000494620 B4GALNT3Q6L9W6 998 aa13.15□□□□□ -0.3
SCRN1-209ENST00000494620 SLC44A5Q8NCS7 719 aa13.15□□□□□ -0.3
SCRN1-209ENST00000494620 EXOC6Q8TAG9 804 aa13.15□□□□□ -0.3
SCRN1-209ENST00000494620 ACER1Q8TDN7 264 aa13.15□□□□□ -0.3
SCRN1-209ENST00000494620 OTUD7AQ8TE49 926 aaPredicted RBP13.15□□□□□ -0.3
SCRN1-209ENST00000494620 NUDT12Q9BQG2 462 aa13.15□□□□□ -0.3
SCRN1-209ENST00000494620 PAGR1Q9BTK6 254 aa13.15□□□□□ -0.3
SCRN1-209ENST00000494620 RNF208Q9H0X6 261 aa13.15□□□□□ -0.3
SCRN1-209ENST00000494620 NAPBQ9H115 298 aa13.15□□□□□ -0.3
SCRN1-209ENST00000494620 STAP2Q9UGK3 403 aa13.15□□□□□ -0.3
SCRN1-209ENST00000494620 POTEFA5A3E0 1075 aa13.14□□□□□ -0.31
SCRN1-209ENST00000494620 CHGBP05060 677 aa13.14□□□□□ -0.31
SCRN1-209ENST00000494620 AKR1B1P15121 316 aa13.14□□□□□ -0.31
SCRN1-209ENST00000494620 VCAM1P19320 739 aa13.14□□□□□ -0.31
SCRN1-209ENST00000494620 ERVK-9P63128 1117 aa13.14□□□□□ -0.31
SCRN1-209ENST00000494620 ERVK-24P63145 666 aa13.14□□□□□ -0.31
SCRN1-209ENST00000494620 PDE4BQ07343 736 aa13.14□□□□□ -0.31
SCRN1-209ENST00000494620 SMC5Q8IY18 1101 aa13.14□□□□□ -0.31
SCRN1-209ENST00000494620 TRMT44Q8IYL2 757 aaKnown RBP13.14□□□□□ -0.31
SCRN1-209ENST00000494620 IFNL3Q8IZI9 196 aa13.14□□□□□ -0.31
SCRN1-209ENST00000494620 TANGO6Q9C0B7 1094 aa13.14□□□□□ -0.31
SCRN1-209ENST00000494620 LNPKQ9C0E8 428 aa13.14□□□□□ -0.31
SCRN1-209ENST00000494620 RPAP3Q9H6T3 665 aaPredicted RBP13.14□□□□□ -0.31
SCRN1-209ENST00000494620 GOPCQ9HD26 462 aa13.14□□□□□ -0.31
SCRN1-209ENST00000494620 RBPJLQ9UBG7 517 aa13.14□□□□□ -0.31
SCRN1-209ENST00000494620 GABRQQ9UN88 632 aa13.14□□□□□ -0.31
SCRN1-209ENST00000494620 CYP2D7A0A087X1C5 515 aa13.13□□□□□ -0.31
SCRN1-209ENST00000494620 RAD21O60216 631 aa13.13□□□□□ -0.31
SCRN1-209ENST00000494620 EN2P19622 333 aaPredicted RBP13.13□□□□□ -0.31
SCRN1-209ENST00000494620 GUCY1A2P33402 732 aa13.13□□□□□ -0.31
SCRN1-209ENST00000494620 PPP4R3BQ5MIZ7 849 aa13.13□□□□□ -0.31
SCRN1-209ENST00000494620 ZMYM1Q5SVZ6 1142 aa13.13□□□□□ -0.31
SCRN1-209ENST00000494620 WDR78Q5VTH9 848 aa13.13□□□□□ -0.31
SCRN1-209ENST00000494620 CHD1LQ86WJ1 897 aa13.13□□□□□ -0.31
SCRN1-209ENST00000494620 SOCS4Q8WXH5 440 aa13.13□□□□□ -0.31
SCRN1-209ENST00000494620 HELLSQ9NRZ9 838 aa13.13□□□□□ -0.31
SCRN1-209ENST00000494620 TMX2Q9Y320 296 aa13.13□□□□□ -0.31
SCRN1-209ENST00000494620 IVNS1ABPQ9Y6Y0 642 aa13.13□□□□□ -0.31
SCRN1-209ENST00000494620 MYO5AQ9Y4I1 1855 aaKnown RBP13.12□□□□□ -0.31
SCRN1-209ENST00000494620 M0R2C6 588 aa13.12□□□□□ -0.31
SCRN1-209ENST00000494620 GJB1P08034 283 aa13.12□□□□□ -0.31
SCRN1-209ENST00000494620 CCL5P13501 91 aa13.12□□□□□ -0.31
SCRN1-209ENST00000494620 MFAP1P55081 439 aaKnown RBP13.12□□□□□ -0.31
SCRN1-209ENST00000494620 PLEKHH3Q7Z736 793 aa13.12□□□□□ -0.31
SCRN1-209ENST00000494620 STK11IPQ8N1F8 1099 aa13.12□□□□□ -0.31
SCRN1-209ENST00000494620 MB21D1Q8N884 522 aa13.12□□□□□ -0.31
SCRN1-209ENST00000494620 RILPL2Q969X0 211 aa13.12□□□□□ -0.31
SCRN1-209ENST00000494620 VCPKMTQ9H867 229 aa13.12□□□□□ -0.31
SCRN1-209ENST00000494620 MYH1P12882 1939 aa13.11□□□□□ -0.31
SCRN1-209ENST00000494620 A0A1W2PRG0 241 aa13.11□□□□□ -0.31
SCRN1-209ENST00000494620 WDR46O15213 610 aaKnown RBP13.11□□□□□ -0.31
SCRN1-209ENST00000494620 FLOT1O75955 427 aa13.11□□□□□ -0.31
SCRN1-209ENST00000494620 EEF2P13639 858 aaKnown RBP13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms