RNA–Protein interactions for RNA: ENST00000494613.5

LIMS2-216, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 2

Gene LIMS2, Length 1,137 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-216ENST00000494613 DDRGK1Q96HY6 314 aa18.76■□□□□ 0.59
LIMS2-216ENST00000494613 C12orf42Q96LP6 360 aa18.76■□□□□ 0.59
LIMS2-216ENST00000494613 FEZ1Q99689 392 aa18.76■□□□□ 0.59
LIMS2-216ENST00000494613 MORF4L1Q9UBU8 362 aa18.76■□□□□ 0.59
LIMS2-216ENST00000494613 TAOK2Q9UL54 1235 aa18.76■□□□□ 0.59
LIMS2-216ENST00000494613 A0A1W2PRG0 241 aa18.75■□□□□ 0.59
LIMS2-216ENST00000494613 GSG1L2A8MUP6 293 aa18.75■□□□□ 0.59
LIMS2-216ENST00000494613 USP17L15C9J2P7 530 aa18.75■□□□□ 0.59
LIMS2-216ENST00000494613 USP17L13C9JLJ4 530 aa18.75■□□□□ 0.59
LIMS2-216ENST00000494613 USP17L11C9JVI0 530 aa18.75■□□□□ 0.59
LIMS2-216ENST00000494613 USP17L18D6R9N7 530 aa18.75■□□□□ 0.59
LIMS2-216ENST00000494613 USP17L22D6RA61 530 aa18.75■□□□□ 0.59
LIMS2-216ENST00000494613 USP17L17D6RBQ6 530 aa18.75■□□□□ 0.59
LIMS2-216ENST00000494613 USP17L19D6RCP7 530 aa18.75■□□□□ 0.59
LIMS2-216ENST00000494613 USP17L20D6RJB6 530 aa18.75■□□□□ 0.59
LIMS2-216ENST00000494613 GLRX3O76003 335 aaKnown RBP18.75■□□□□ 0.59
LIMS2-216ENST00000494613 ZFYP08048 801 aaPredicted RBP18.75■□□□□ 0.59
LIMS2-216ENST00000494613 USP17L24Q0WX57 530 aa18.75■□□□□ 0.59
LIMS2-216ENST00000494613 IRF5Q13568 498 aa18.75■□□□□ 0.59
LIMS2-216ENST00000494613 POTEEQ6S8J3 1075 aa18.75■□□□□ 0.59
LIMS2-216ENST00000494613 CATSPERGQ6ZRH7 1159 aa18.75■□□□□ 0.59
LIMS2-216ENST00000494613 SIAH1Q8IUQ4 282 aa18.75■□□□□ 0.59
LIMS2-216ENST00000494613 GPRC5AQ8NFJ5 357 aa18.75■□□□□ 0.59
LIMS2-216ENST00000494613 APPBP2Q92624 585 aa18.75■□□□□ 0.59
LIMS2-216ENST00000494613 GCC1Q96CN9 775 aa18.75■□□□□ 0.59
LIMS2-216ENST00000494613 TXNRD2Q9NNW7 524 aa18.75■□□□□ 0.59
LIMS2-216ENST00000494613 ZBTB47Q9UFB7 747 aaPredicted RBP18.75■□□□□ 0.59
LIMS2-216ENST00000494613 GJD2Q9UKL4 321 aa18.75■□□□□ 0.59
LIMS2-216ENST00000494613 AAMPQ13685 434 aa18.74■□□□□ 0.59
LIMS2-216ENST00000494613 AMOTL1Q8IY63 956 aa18.74■□□□□ 0.59
LIMS2-216ENST00000494613 CCDC17Q96LX7 622 aa18.74■□□□□ 0.59
LIMS2-216ENST00000494613 MX1P20591 662 aa18.73■□□□□ 0.59
LIMS2-216ENST00000494613 LRRFIP1Q32MZ4 808 aaKnown RBP18.73■□□□□ 0.59
LIMS2-216ENST00000494613 SBK1Q52WX2 424 aa18.73■□□□□ 0.59
LIMS2-216ENST00000494613 TMEM179Q6ZVK1 233 aa18.73■□□□□ 0.59
LIMS2-216ENST00000494613 C16orf86Q6ZW13 317 aa18.73■□□□□ 0.59
LIMS2-216ENST00000494613 SLAIN1Q8ND83 568 aa18.73■□□□□ 0.59
LIMS2-216ENST00000494613 PXYLP1Q8TE99 480 aa18.73■□□□□ 0.59
LIMS2-216ENST00000494613 KIAA0100Q14667 2235 aaKnown RBP18.73■□□□□ 0.59
LIMS2-216ENST00000494613 PATL2C9JE40 543 aaKnown RBP18.72■□□□□ 0.59
LIMS2-216ENST00000494613 CCL5P13501 91 aa18.72■□□□□ 0.59
LIMS2-216ENST00000494613 AKR1B1P15121 316 aa18.72■□□□□ 0.59
LIMS2-216ENST00000494613 ELNP15502 786 aa18.72■□□□□ 0.59
LIMS2-216ENST00000494613 UBXN2AP68543 259 aa18.72■□□□□ 0.59
LIMS2-216ENST00000494613 GIMAP6Q6P9H5 292 aa18.72■□□□□ 0.59
LIMS2-216ENST00000494613 STAP2Q9UGK3 403 aa18.72■□□□□ 0.59
LIMS2-216ENST00000494613 SALL3Q9BXA9 1300 aa18.72■□□□□ 0.59
LIMS2-216ENST00000494613 LOC285556D6RIA3 1793 aa18.71■□□□□ 0.59
LIMS2-216ENST00000494613 M0R2C6 588 aa18.71■□□□□ 0.59
LIMS2-216ENST00000494613 GPAA1O43292 621 aa18.71■□□□□ 0.59
LIMS2-216ENST00000494613 VCAM1P19320 739 aa18.71■□□□□ 0.59
LIMS2-216ENST00000494613 EXOC6Q8TAG9 804 aa18.71■□□□□ 0.59
LIMS2-216ENST00000494613 GTF3C2Q8WUA4 911 aaPredicted RBP18.71■□□□□ 0.59
LIMS2-216ENST00000494613 SEC62Q99442 399 aaKnown RBP18.71■□□□□ 0.59
LIMS2-216ENST00000494613 PAGR1Q9BTK6 254 aa18.71■□□□□ 0.59
LIMS2-216ENST00000494613 RNF208Q9H0X6 261 aa18.71■□□□□ 0.59
LIMS2-216ENST00000494613 RWDD1Q9H446 243 aaPredicted RBP18.71■□□□□ 0.59
LIMS2-216ENST00000494613 RPAP3Q9H6T3 665 aaPredicted RBP18.71■□□□□ 0.59
LIMS2-216ENST00000494613 MINDY4BA8MYZ0 360 aa18.7■□□□□ 0.58
LIMS2-216ENST00000494613 IGHDP01880 384 aa18.7■□□□□ 0.58
LIMS2-216ENST00000494613 APPP05067 770 aa18.7■□□□□ 0.58
LIMS2-216ENST00000494613 GNAT2P19087 354 aa18.7■□□□□ 0.58
LIMS2-216ENST00000494613 ERVK-9P63128 1117 aa18.7■□□□□ 0.58
LIMS2-216ENST00000494613 ERVK-24P63145 666 aa18.7■□□□□ 0.58
LIMS2-216ENST00000494613 KIAA1755Q5JYT7 1200 aa18.7■□□□□ 0.58
LIMS2-216ENST00000494613 RABGAP1Q9Y3P9 1069 aa18.7■□□□□ 0.58
LIMS2-216ENST00000494613 SUPT16HQ9Y5B9 1047 aaKnown RBP18.7■□□□□ 0.58
LIMS2-216ENST00000494613 DOCK3Q8IZD9 2030 aa18.69■□□□□ 0.58
LIMS2-216ENST00000494613 MGAMO43451 1857 aa18.69■□□□□ 0.58
LIMS2-216ENST00000494613 CNMDO75829 334 aa18.69■□□□□ 0.58
LIMS2-216ENST00000494613 GJB1P08034 283 aa18.69■□□□□ 0.58
LIMS2-216ENST00000494613 PDE1AP54750 535 aa18.69■□□□□ 0.58
LIMS2-216ENST00000494613 COG2Q14746 738 aa18.69■□□□□ 0.58
LIMS2-216ENST00000494613 ZMYM1Q5SVZ6 1142 aa18.69■□□□□ 0.58
LIMS2-216ENST00000494613 CCAR1Q8IX12 1150 aaKnown RBP18.69■□□□□ 0.58
LIMS2-216ENST00000494613 STK11IPQ8N1F8 1099 aa18.69■□□□□ 0.58
LIMS2-216ENST00000494613 FSD1Q9BTV5 496 aa18.69■□□□□ 0.58
LIMS2-216ENST00000494613 UNC93B1Q9H1C4 597 aa18.69■□□□□ 0.58
LIMS2-216ENST00000494613 PORCNQ9H237 461 aa18.69■□□□□ 0.58
LIMS2-216ENST00000494613 HOXC10Q9NYD6 342 aa18.69■□□□□ 0.58
LIMS2-216ENST00000494613 ARPP21Q9UBL0 812 aaPredicted RBP18.69■□□□□ 0.58
LIMS2-216ENST00000494613 TMX2Q9Y320 296 aa18.69■□□□□ 0.58
LIMS2-216ENST00000494613 INHAP05111 366 aa18.68■□□□□ 0.58
LIMS2-216ENST00000494613 MAPK4P31152 587 aa18.68■□□□□ 0.58
LIMS2-216ENST00000494613 GJA8P48165 433 aa18.68■□□□□ 0.58
LIMS2-216ENST00000494613 CLEC10AQ8IUN9 316 aa18.68■□□□□ 0.58
LIMS2-216ENST00000494613 IFNL3Q8IZI9 196 aa18.68■□□□□ 0.58
LIMS2-216ENST00000494613 NKX2-3Q8TAU0 364 aa18.68■□□□□ 0.58
LIMS2-216ENST00000494613 KANSL2Q9H9L4 492 aa18.68■□□□□ 0.58
LIMS2-216ENST00000494613 MKNK2Q9HBH9 465 aa18.68■□□□□ 0.58
LIMS2-216ENST00000494613 ARHGEF10LQ9HCE6 1279 aa18.68■□□□□ 0.58
LIMS2-216ENST00000494613 BAZ2AQ9UIF9 1905 aaKnown RBP18.67■□□□□ 0.58
LIMS2-216ENST00000494613 EEF2P13639 858 aaKnown RBP18.67■□□□□ 0.58
LIMS2-216ENST00000494613 CYP2B6P20813 491 aa18.67■□□□□ 0.58
LIMS2-216ENST00000494613 ICA1Q05084 483 aa18.67■□□□□ 0.58
LIMS2-216ENST00000494613 B4GALNT3Q6L9W6 998 aa18.67■□□□□ 0.58
LIMS2-216ENST00000494613 LBX2Q6XYB7 198 aa18.67■□□□□ 0.58
LIMS2-216ENST00000494613 SMC5Q8IY18 1101 aa18.67■□□□□ 0.58
LIMS2-216ENST00000494613 NUDT12Q9BQG2 462 aa18.67■□□□□ 0.58
LIMS2-216ENST00000494613 GNL3Q9BVP2 549 aaKnown RBP eCLIP18.67■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms