RNA–Protein interactions for RNA: ENST00000494434.1

PICK1-215, Transcript of protein interacting with PRKCA 1, human

TSL 4

Gene PICK1, Length 559 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PICK1-215	ENST00000494434	ZYX	Q15942	572 aa	Known RBP	13.58	□□□□□ -0.24
PICK1-215	ENST00000494434	USP17L2	Q6R6M4	530 aa		13.58	□□□□□ -0.24
PICK1-215	ENST00000494434	C17orf99	Q6UX52	265 aa		13.58	□□□□□ -0.24
PICK1-215	ENST00000494434	OTOP1	Q7RTM1	612 aa		13.58	□□□□□ -0.24
PICK1-215	ENST00000494434	CCDC17	Q96LX7	622 aa		13.58	□□□□□ -0.24
PICK1-215	ENST00000494434	PARP14	Q460N5	1801 aa		13.57	□□□□□ -0.24
PICK1-215	ENST00000494434		A0A0G2JMZ2	1700 aa		13.57	□□□□□ -0.24
PICK1-215	ENST00000494434	CAPN15	O75808	1086 aa		13.57	□□□□□ -0.24
PICK1-215	ENST00000494434	SDS	P20132	328 aa		13.57	□□□□□ -0.24
PICK1-215	ENST00000494434	OSBP	P22059	807 aa		13.57	□□□□□ -0.24
PICK1-215	ENST00000494434	USP14	P54578	494 aa		13.57	□□□□□ -0.24
PICK1-215	ENST00000494434	LACTB	P83111	547 aa	Predicted RBP	13.57	□□□□□ -0.24
PICK1-215	ENST00000494434	ICA1	Q05084	483 aa		13.57	□□□□□ -0.24
PICK1-215	ENST00000494434	KIF22	Q14807	665 aa		13.57	□□□□□ -0.24
PICK1-215	ENST00000494434	MCMDC2	Q4G0Z9	681 aa		13.57	□□□□□ -0.24
PICK1-215	ENST00000494434	TTC22	Q5TAA0	569 aa		13.57	□□□□□ -0.24
PICK1-215	ENST00000494434	STK11IP	Q8N1F8	1099 aa		13.57	□□□□□ -0.24
PICK1-215	ENST00000494434	C12orf42	Q96LP6	360 aa		13.57	□□□□□ -0.24
PICK1-215	ENST00000494434	KIAA1683	Q9H0B3	1180 aa		13.57	□□□□□ -0.24
PICK1-215	ENST00000494434	EFCC1	Q9HA90	598 aa		13.57	□□□□□ -0.24
PICK1-215	ENST00000494434	DIAPH3	Q9NSV4	1193 aa		13.57	□□□□□ -0.24
PICK1-215	ENST00000494434	CCDC171	Q6TFL3	1326 aa		13.57	□□□□□ -0.24
PICK1-215	ENST00000494434	HIP1	O00291	1037 aa		13.56	□□□□□ -0.24
PICK1-215	ENST00000494434	FOXP2	O15409	715 aa		13.56	□□□□□ -0.24
PICK1-215	ENST00000494434	BCR	P11274	1271 aa		13.56	□□□□□ -0.24
PICK1-215	ENST00000494434	GSPT1	P15170	499 aa	Known RBP	13.56	□□□□□ -0.24
PICK1-215	ENST00000494434	IRX3	P78415	501 aa	Predicted RBP	13.56	□□□□□ -0.24
PICK1-215	ENST00000494434	ARHGEF6	Q15052	776 aa		13.56	□□□□□ -0.24
PICK1-215	ENST00000494434	VPS53	Q5VIR6	699 aa		13.56	□□□□□ -0.24
PICK1-215	ENST00000494434	FBXO46	Q6PJ61	603 aa	Predicted RBP	13.56	□□□□□ -0.24
PICK1-215	ENST00000494434	CENPQ	Q7L2Z9	268 aa	Predicted RBP	13.56	□□□□□ -0.24
PICK1-215	ENST00000494434	CLEC10A	Q8IUN9	316 aa		13.56	□□□□□ -0.24
PICK1-215	ENST00000494434	ACER1	Q8TDN7	264 aa		13.56	□□□□□ -0.24
PICK1-215	ENST00000494434	ASCC2	Q9H1I8	757 aa	Predicted RBP	13.56	□□□□□ -0.24
PICK1-215	ENST00000494434	MKNK2	Q9HBH9	465 aa		13.56	□□□□□ -0.24
PICK1-215	ENST00000494434	ZNF287	Q9HBT7	754 aa		13.56	□□□□□ -0.24
PICK1-215	ENST00000494434	ARHGEF10L	Q9HCE6	1279 aa		13.56	□□□□□ -0.24
PICK1-215	ENST00000494434	EMILIN3	Q9NT22	766 aa		13.56	□□□□□ -0.24
PICK1-215	ENST00000494434	NEFL	P07196	543 aa		13.55	□□□□□ -0.24
PICK1-215	ENST00000494434	SLC3A2	P08195	630 aa	Known RBP	13.55	□□□□□ -0.24
PICK1-215	ENST00000494434	RASA1	P20936	1047 aa		13.55	□□□□□ -0.24
PICK1-215	ENST00000494434	MFAP1	P55081	439 aa	Known RBP	13.55	□□□□□ -0.24
PICK1-215	ENST00000494434	CAP1	Q01518	475 aa		13.55	□□□□□ -0.24
PICK1-215	ENST00000494434	PPARA	Q07869	468 aa		13.55	□□□□□ -0.24
PICK1-215	ENST00000494434	ZNF589	Q86UQ0	364 aa	Predicted RBP	13.55	□□□□□ -0.24
PICK1-215	ENST00000494434	ARHGAP39	Q9C0H5	1083 aa		13.55	□□□□□ -0.24
PICK1-215	ENST00000494434	SH2D4A	Q9H788	454 aa		13.55	□□□□□ -0.24
PICK1-215	ENST00000494434	ZMYM6	O95789	1325 aa		13.55	□□□□□ -0.24
PICK1-215	ENST00000494434	ECM2	O94769	699 aa	Predicted RBP	13.54	□□□□□ -0.24
PICK1-215	ENST00000494434	VCAM1	P19320	739 aa		13.54	□□□□□ -0.24
PICK1-215	ENST00000494434	HOXA7	P31268	230 aa	Predicted RBP	13.54	□□□□□ -0.24
PICK1-215	ENST00000494434	GCLC	P48506	637 aa	Predicted RBP	13.54	□□□□□ -0.24
PICK1-215	ENST00000494434	FAM110C	Q1W6H9	321 aa		13.54	□□□□□ -0.24
PICK1-215	ENST00000494434	CWC27	Q6UX04	472 aa	Known RBP	13.54	□□□□□ -0.24
PICK1-215	ENST00000494434	HPS5	Q9UPZ3	1129 aa		13.54	□□□□□ -0.24
PICK1-215	ENST00000494434	PLIN4	Q96Q06	1357 aa		13.54	□□□□□ -0.24
PICK1-215	ENST00000494434	RBBP6	Q7Z6E9	1792 aa	Known RBP	13.53	□□□□□ -0.24
PICK1-215	ENST00000494434	RLF	Q13129	1914 aa		13.53	□□□□□ -0.24
PICK1-215	ENST00000494434		A0A1W2PRG0	241 aa		13.53	□□□□□ -0.24
PICK1-215	ENST00000494434	PRDM1	O75626	825 aa		13.53	□□□□□ -0.24
PICK1-215	ENST00000494434	GNRH1	P01148	92 aa		13.53	□□□□□ -0.24
PICK1-215	ENST00000494434	HSPD1	P10809	573 aa	Known RBP	13.53	□□□□□ -0.24
PICK1-215	ENST00000494434	FCGRT	P55899	365 aa		13.53	□□□□□ -0.24
PICK1-215	ENST00000494434	HERVK_113	P62684	666 aa		13.53	□□□□□ -0.24
PICK1-215	ENST00000494434	PDE4B	Q07343	736 aa		13.53	□□□□□ -0.24
PICK1-215	ENST00000494434	ANKRD13C	Q8N6S4	541 aa		13.53	□□□□□ -0.24
PICK1-215	ENST00000494434	GTF3C2	Q8WUA4	911 aa	Predicted RBP	13.53	□□□□□ -0.24
PICK1-215	ENST00000494434	KANSL2	Q9H9L4	492 aa		13.53	□□□□□ -0.24
PICK1-215	ENST00000494434	PTPN22	Q9Y2R2	807 aa		13.53	□□□□□ -0.24
PICK1-215	ENST00000494434	CCDC85C	A6NKD9	419 aa		13.52	□□□□□ -0.25
PICK1-215	ENST00000494434	USP17L15	C9J2P7	530 aa		13.52	□□□□□ -0.25
PICK1-215	ENST00000494434	USP17L13	C9JLJ4	530 aa		13.52	□□□□□ -0.25
PICK1-215	ENST00000494434	USP17L11	C9JVI0	530 aa		13.52	□□□□□ -0.25
PICK1-215	ENST00000494434	USP17L18	D6R9N7	530 aa		13.52	□□□□□ -0.25
PICK1-215	ENST00000494434	USP17L22	D6RA61	530 aa		13.52	□□□□□ -0.25
PICK1-215	ENST00000494434	USP17L17	D6RBQ6	530 aa		13.52	□□□□□ -0.25
PICK1-215	ENST00000494434	USP17L19	D6RCP7	530 aa		13.52	□□□□□ -0.25
PICK1-215	ENST00000494434	USP17L20	D6RJB6	530 aa		13.52	□□□□□ -0.25
PICK1-215	ENST00000494434	CENPB	P07199	599 aa	Predicted RBP	13.52	□□□□□ -0.25
PICK1-215	ENST00000494434	CTGF	P29279	349 aa		13.52	□□□□□ -0.25
PICK1-215	ENST00000494434	PSMC4	P43686	418 aa		13.52	□□□□□ -0.25
PICK1-215	ENST00000494434	ATP2B2	Q01814	1243 aa		13.52	□□□□□ -0.25
PICK1-215	ENST00000494434	USP17L24	Q0WX57	530 aa		13.52	□□□□□ -0.25
PICK1-215	ENST00000494434	ALX1	Q15699	326 aa		13.52	□□□□□ -0.25
PICK1-215	ENST00000494434	ZNF444	Q8N0Y2	327 aa	Predicted RBP	13.52	□□□□□ -0.25
PICK1-215	ENST00000494434	LPAR1	Q92633	364 aa		13.52	□□□□□ -0.25
PICK1-215	ENST00000494434	TRIM47	Q96LD4	638 aa		13.52	□□□□□ -0.25
PICK1-215	ENST00000494434	RPAP3	Q9H6T3	665 aa	Predicted RBP	13.52	□□□□□ -0.25
PICK1-215	ENST00000494434	VCPKMT	Q9H867	229 aa		13.52	□□□□□ -0.25
PICK1-215	ENST00000494434	TMX2	Q9Y320	296 aa		13.52	□□□□□ -0.25
PICK1-215	ENST00000494434	RAD50	Q92878	1312 aa		13.52	□□□□□ -0.25
PICK1-215	ENST00000494434	COL11A1	P12107	1806 aa	Predicted RBP	13.52	□□□□□ -0.25
PICK1-215	ENST00000494434	MYPN	Q86TC9	1320 aa		13.51	□□□□□ -0.25
PICK1-215	ENST00000494434	FMNL1	O95466	1100 aa	Predicted RBP	13.51	□□□□□ -0.25
PICK1-215	ENST00000494434	EEF2	P13639	858 aa	Known RBP	13.51	□□□□□ -0.25
PICK1-215	ENST00000494434	PRMT2	P55345	433 aa		13.51	□□□□□ -0.25
PICK1-215	ENST00000494434	CTDSPL2	Q05D32	466 aa		13.51	□□□□□ -0.25
PICK1-215	ENST00000494434	GNL3	Q9BVP2	549 aa	Known RBP eCLIP	13.51	□□□□□ -0.25
PICK1-215	ENST00000494434	MORF4L1	Q9UBU8	362 aa		13.51	□□□□□ -0.25
PICK1-215	ENST00000494434	ANAPC4	Q9UJX5	808 aa		13.51	□□□□□ -0.25

Retrieved 100 of 20,778 RNA–protein pairs in 43 ms