RNA–Protein interactions for RNA: ENST00000494402.5

SNX13-210, Transcript of sorting nexin 13, humanhuman

TSL 3

Gene SNX13, Length 453 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-210ENST00000494402 DACT2Q5SW24 774 aa8.25□□□□□ -1.09
SNX13-210ENST00000494402 PEAR1Q5VY43 1037 aaPredicted RBP8.25□□□□□ -1.09
SNX13-210ENST00000494402 MAATS1Q7Z4T9 603 aa8.25□□□□□ -1.09
SNX13-210ENST00000494402 FAM186BQ8IYM0 893 aa8.25□□□□□ -1.09
SNX13-210ENST00000494402 ZSCAN1Q8NBB4 408 aa8.25□□□□□ -1.09
SNX13-210ENST00000494402 IFT22Q9H7X7 185 aa8.25□□□□□ -1.09
SNX13-210ENST00000494402 DDX21Q9NR30 783 aaKnown RBP eCLIP8.25□□□□□ -1.09
SNX13-210ENST00000494402 TRAV20A0A0B4J274 112 aa8.24□□□□□ -1.09
SNX13-210ENST00000494402 ABHD14A-ACY1A0A1B0GW23 586 aa8.24□□□□□ -1.09
SNX13-210ENST00000494402 ZEB2O60315 1214 aa8.24□□□□□ -1.09
SNX13-210ENST00000494402 DNAJC8O75937 253 aaPredicted RBP8.24□□□□□ -1.09
SNX13-210ENST00000494402 RBP3P10745 1247 aa8.24□□□□□ -1.09
SNX13-210ENST00000494402 CENPCQ03188 943 aa8.24□□□□□ -1.09
SNX13-210ENST00000494402 ADCY1Q08828 1119 aa8.24□□□□□ -1.09
SNX13-210ENST00000494402 TBX2Q13207 712 aaPredicted RBP8.24□□□□□ -1.09
SNX13-210ENST00000494402 CLN3Q13286 438 aa8.24□□□□□ -1.09
SNX13-210ENST00000494402 ELF2Q15723 593 aa8.24□□□□□ -1.09
SNX13-210ENST00000494402 ALDH1L2Q3SY69 923 aa8.24□□□□□ -1.09
SNX13-210ENST00000494402 FAM133BQ5BKY9 247 aaKnown RBP8.24□□□□□ -1.09
SNX13-210ENST00000494402 LVRNQ6Q4G3 990 aa8.24□□□□□ -1.09
SNX13-210ENST00000494402 SRLQ86TD4 932 aa8.24□□□□□ -1.09
SNX13-210ENST00000494402 TTC30BQ8N4P2 665 aa8.24□□□□□ -1.09
SNX13-210ENST00000494402 NKAPQ8N5F7 415 aaKnown RBP8.24□□□□□ -1.09
SNX13-210ENST00000494402 TBATAQ96M53 351 aa8.24□□□□□ -1.09
SNX13-210ENST00000494402 MENTQ9BUN1 341 aa8.24□□□□□ -1.09
SNX13-210ENST00000494402 APOBEC2Q9Y235 224 aaKnown RBP8.24□□□□□ -1.09
SNX13-210ENST00000494402 GIT1Q9Y2X7 761 aa8.24□□□□□ -1.09
SNX13-210ENST00000494402 PCDHB5Q9Y5E4 795 aa8.24□□□□□ -1.09
SNX13-210ENST00000494402 C9IYK1 514 aa8.23□□□□□ -1.09
SNX13-210ENST00000494402 F5H423 210 aaPredicted RBP8.23□□□□□ -1.09
SNX13-210ENST00000494402 ATE1O95260 518 aa8.23□□□□□ -1.09
SNX13-210ENST00000494402 GTF2E1P29083 439 aaPredicted RBP8.23□□□□□ -1.09
SNX13-210ENST00000494402 ADD1P35611 737 aaKnown RBP8.23□□□□□ -1.09
SNX13-210ENST00000494402 AK2P54819 239 aa8.23□□□□□ -1.09
SNX13-210ENST00000494402 EIF5P55010 431 aaKnown RBP8.23□□□□□ -1.09
SNX13-210ENST00000494402 ARID5BQ14865 1188 aa8.23□□□□□ -1.09
SNX13-210ENST00000494402 ABCB5Q2M3G0 1257 aa8.23□□□□□ -1.09
SNX13-210ENST00000494402 CFAP161Q6P656 301 aa8.23□□□□□ -1.09
SNX13-210ENST00000494402 PDXDC1Q6P996 788 aa8.23□□□□□ -1.09
SNX13-210ENST00000494402 Q6ZNB5 142 aa8.23□□□□□ -1.09
SNX13-210ENST00000494402 SCUBE1Q8IWY4 988 aa8.23□□□□□ -1.09
SNX13-210ENST00000494402 ACRBPQ8NEB7 543 aa8.23□□□□□ -1.09
SNX13-210ENST00000494402 TCF12Q99081 682 aa8.23□□□□□ -1.09
SNX13-210ENST00000494402 MYD88Q99836 296 aa8.23□□□□□ -1.09
SNX13-210ENST00000494402 SLC13A1Q9BZW2 595 aa8.23□□□□□ -1.09
SNX13-210ENST00000494402 LRRC27Q9C0I9 530 aa8.23□□□□□ -1.09
SNX13-210ENST00000494402 ZBTB21Q9ULJ3 1066 aa8.23□□□□□ -1.09
SNX13-210ENST00000494402 GPC6Q9Y625 555 aaPredicted RBP8.23□□□□□ -1.09
SNX13-210ENST00000494402 A0A087WZG4 1122 aa8.22□□□□□ -1.09
SNX13-210ENST00000494402 XYLBO75191 536 aa8.22□□□□□ -1.09
SNX13-210ENST00000494402 RHOBTB3O94955 611 aa8.22□□□□□ -1.09
SNX13-210ENST00000494402 PYGMP11217 842 aa8.22□□□□□ -1.09
SNX13-210ENST00000494402 GRB10Q13322 594 aa8.22□□□□□ -1.09
SNX13-210ENST00000494402 XRRA1Q6P2D8 792 aa8.22□□□□□ -1.09
SNX13-210ENST00000494402 EPM2AIP1Q7L775 607 aaPredicted RBP8.22□□□□□ -1.09
SNX13-210ENST00000494402 ANKRD23Q86SG2 305 aa8.22□□□□□ -1.09
SNX13-210ENST00000494402 NLRP13Q86W25 1043 aa8.22□□□□□ -1.09
SNX13-210ENST00000494402 RASSF3Q86WH2 238 aa8.22□□□□□ -1.09
SNX13-210ENST00000494402 TAB3Q8N5C8 712 aaPredicted RBP8.22□□□□□ -1.09
SNX13-210ENST00000494402 PARD3BQ8TEW8 1205 aa8.22□□□□□ -1.09
SNX13-210ENST00000494402 PHAXQ9H814 394 aaKnown RBP8.22□□□□□ -1.09
SNX13-210ENST00000494402 SUCOQ9UBS9 1254 aaKnown RBP8.22□□□□□ -1.09
SNX13-210ENST00000494402 SAMM50Q9Y512 469 aa8.22□□□□□ -1.09
SNX13-210ENST00000494402 A0A1W2PRQ8 180 aa8.21□□□□□ -1.1
SNX13-210ENST00000494402 MEIS3P2A8K0S8 358 aa8.21□□□□□ -1.1
SNX13-210ENST00000494402 RNF223E7ERA6 249 aa8.21□□□□□ -1.1
SNX13-210ENST00000494402 NEMP1O14524 444 aa8.21□□□□□ -1.1
SNX13-210ENST00000494402 PPEF1O14829 653 aaPredicted RBP8.21□□□□□ -1.1
SNX13-210ENST00000494402 ORC4O43929 436 aa8.21□□□□□ -1.1
SNX13-210ENST00000494402 KPNA6O60684 536 aa8.21□□□□□ -1.1
SNX13-210ENST00000494402 PAGE1O75459 146 aa8.21□□□□□ -1.1
SNX13-210ENST00000494402 BPIP17213 487 aa8.21□□□□□ -1.1
SNX13-210ENST00000494402 TNFAIP3P21580 790 aa8.21□□□□□ -1.1
SNX13-210ENST00000494402 LPOP22079 712 aaPredicted RBP8.21□□□□□ -1.1
SNX13-210ENST00000494402 RECQLP46063 649 aaPredicted RBP8.21□□□□□ -1.1
SNX13-210ENST00000494402 GTF2A2P52657 109 aa8.21□□□□□ -1.1
SNX13-210ENST00000494402 SUMO1P63165 101 aaKnown RBP8.21□□□□□ -1.1
SNX13-210ENST00000494402 SEPT7Q16181 437 aaKnown RBP8.21□□□□□ -1.1
SNX13-210ENST00000494402 TMEM240Q5SV17 173 aa8.21□□□□□ -1.1
SNX13-210ENST00000494402 C1QTNF12Q5T7M4 302 aa8.21□□□□□ -1.1
SNX13-210ENST00000494402 PPP1R26Q5T8A7 1209 aaPredicted RBP8.21□□□□□ -1.1
SNX13-210ENST00000494402 RSRC2Q7L4I2 434 aaKnown RBP8.21□□□□□ -1.1
SNX13-210ENST00000494402 MYLK4Q86YV6 388 aaPredicted RBP8.21□□□□□ -1.1
SNX13-210ENST00000494402 CCNJLQ8IV13 435 aa8.21□□□□□ -1.1
SNX13-210ENST00000494402 CCDC116Q8IYX3 515 aa8.21□□□□□ -1.1
SNX13-210ENST00000494402 CPA6Q8N4T0 437 aa8.21□□□□□ -1.1
SNX13-210ENST00000494402 ANKLE1Q8NAG6 615 aa8.21□□□□□ -1.1
SNX13-210ENST00000494402 ZNF280CQ8ND82 737 aa8.21□□□□□ -1.1
SNX13-210ENST00000494402 OR2W6PQ8NHA6 318 aa8.21□□□□□ -1.1
SNX13-210ENST00000494402 RHBDD1Q8TEB9 315 aa8.21□□□□□ -1.1
SNX13-210ENST00000494402 AIFM3Q96NN9 605 aa8.21□□□□□ -1.1
SNX13-210ENST00000494402 DDX24Q9GZR7 859 aaKnown RBP eCLIP8.21□□□□□ -1.1
SNX13-210ENST00000494402 SEC31BQ9NQW1 1179 aa8.21□□□□□ -1.1
SNX13-210ENST00000494402 ARHGEF4Q9NR80 690 aa8.21□□□□□ -1.1
SNX13-210ENST00000494402 SAP30BPQ9UHR5 308 aaKnown RBP8.21□□□□□ -1.1
SNX13-210ENST00000494402 OPA1O60313 960 aa8.2□□□□□ -1.1
SNX13-210ENST00000494402 SNX2O60749 519 aa8.2□□□□□ -1.1
SNX13-210ENST00000494402 AGR2O95994 175 aa8.2□□□□□ -1.1
SNX13-210ENST00000494402 APBA3O96018 575 aa8.2□□□□□ -1.1
SNX13-210ENST00000494402 RPN1P04843 607 aaKnown RBP8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms