RNA–Protein interactions for RNA: ENST00000494248.1

PTPN12-212, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 3

Gene PTPN12, Length 470 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-212ENST00000494248 BDH2Q9BUT1 245 aa4.38□□□□□ -1.71
PTPN12-212ENST00000494248 CBX8Q9HC52 389 aa4.38□□□□□ -1.71
PTPN12-212ENST00000494248 NOTOA8MTQ0 251 aa4.37□□□□□ -1.71
PTPN12-212ENST00000494248 EIF1AYO14602 144 aaKnown RBP4.37□□□□□ -1.71
PTPN12-212ENST00000494248 PAGE1O75459 146 aa4.37□□□□□ -1.71
PTPN12-212ENST00000494248 TNFRSF1AP19438 455 aa4.37□□□□□ -1.71
PTPN12-212ENST00000494248 PDE6BP35913 854 aa4.37□□□□□ -1.71
PTPN12-212ENST00000494248 TMEFF1Q8IYR6 380 aa4.37□□□□□ -1.71
PTPN12-212ENST00000494248 LILRA2Q8N149 483 aa4.37□□□□□ -1.71
PTPN12-212ENST00000494248 TP53I13Q8NBR0 393 aaPredicted RBP4.37□□□□□ -1.71
PTPN12-212ENST00000494248 KCT2Q8NC54 265 aa4.37□□□□□ -1.71
PTPN12-212ENST00000494248 ZNF507Q8TCN5 953 aa4.37□□□□□ -1.71
PTPN12-212ENST00000494248 Q96M66 194 aa4.37□□□□□ -1.71
PTPN12-212ENST00000494248 SLITRK6Q9H5Y7 841 aa4.37□□□□□ -1.71
PTPN12-212ENST00000494248 CWC22Q9HCG8 908 aaKnown RBP4.37□□□□□ -1.71
PTPN12-212ENST00000494248 TRAK1Q9UPV9 953 aa4.37□□□□□ -1.71
PTPN12-212ENST00000494248 TPP2P29144 1249 aaPredicted RBP4.36□□□□□ -1.71
PTPN12-212ENST00000494248 KRTAP10-9P60411 292 aa4.36□□□□□ -1.71
PTPN12-212ENST00000494248 RTP5Q14D33 572 aa4.36□□□□□ -1.71
PTPN12-212ENST00000494248 NR0B2Q15466 257 aa4.36□□□□□ -1.71
PTPN12-212ENST00000494248 CRB2Q5IJ48 1285 aa4.36□□□□□ -1.71
PTPN12-212ENST00000494248 ERICH6BQ5W0A0 696 aa4.36□□□□□ -1.71
PTPN12-212ENST00000494248 CDH24Q86UP0 819 aa4.36□□□□□ -1.71
PTPN12-212ENST00000494248 CNTD2Q9H8S5 307 aa4.36□□□□□ -1.71
PTPN12-212ENST00000494248 IRAK3Q9Y616 596 aa4.36□□□□□ -1.71
PTPN12-212ENST00000494248 ZC3H12DA2A288 527 aaKnown RBP4.35□□□□□ -1.71
PTPN12-212ENST00000494248 TMEM88BA6NKF7 163 aa4.35□□□□□ -1.71
PTPN12-212ENST00000494248 TRIM37O94972 964 aa4.35□□□□□ -1.71
PTPN12-212ENST00000494248 ABL1P00519 1130 aa4.35□□□□□ -1.71
PTPN12-212ENST00000494248 CAP2P40123 477 aa4.35□□□□□ -1.71
PTPN12-212ENST00000494248 PTPN11Q06124 597 aaPredicted RBP4.35□□□□□ -1.71
PTPN12-212ENST00000494248 LRFN4Q6PJG9 635 aa4.35□□□□□ -1.71
PTPN12-212ENST00000494248 FRMD5Q7Z6J6 570 aa4.35□□□□□ -1.71
PTPN12-212ENST00000494248 MFSD2AQ8NA29 543 aa4.35□□□□□ -1.71
PTPN12-212ENST00000494248 XAGE3Q8WTP9 111 aa4.35□□□□□ -1.71
PTPN12-212ENST00000494248 FAM129BQ96TA1 746 aa4.35□□□□□ -1.71
PTPN12-212ENST00000494248 EMILIN2Q9BXX0 1053 aa4.35□□□□□ -1.71
PTPN12-212ENST00000494248 PCDHA4Q9UN74 947 aa4.35□□□□□ -1.71
PTPN12-212ENST00000494248 PRAMEF27A3QJZ7 478 aa4.34□□□□□ -1.71
PTPN12-212ENST00000494248 FITM1A5D6W6 292 aa4.34□□□□□ -1.71
PTPN12-212ENST00000494248 IRS4O14654 1257 aaPredicted RBP4.34□□□□□ -1.71
PTPN12-212ENST00000494248 ENC1O14682 589 aa4.34□□□□□ -1.71
PTPN12-212ENST00000494248 NEFLP07196 543 aa4.34□□□□□ -1.71
PTPN12-212ENST00000494248 KIR3DL1P43629 444 aa4.34□□□□□ -1.71
PTPN12-212ENST00000494248 CDK8P49336 464 aa4.34□□□□□ -1.71
PTPN12-212ENST00000494248 SRSF3P84103 164 aaKnown RBP4.34□□□□□ -1.71
PTPN12-212ENST00000494248 EGR3Q06889 387 aa4.34□□□□□ -1.71
PTPN12-212ENST00000494248 PRAMEF13Q5VWM6 474 aa4.34□□□□□ -1.71
PTPN12-212ENST00000494248 OXR1Q8N573 874 aa4.34□□□□□ -1.71
PTPN12-212ENST00000494248 NECAB3Q96P71 396 aaPredicted RBP4.34□□□□□ -1.71
PTPN12-212ENST00000494248 GPR20Q99678 358 aa4.34□□□□□ -1.71
PTPN12-212ENST00000494248 LUC7LQ9NQ29 371 aaKnown RBP4.34□□□□□ -1.71
PTPN12-212ENST00000494248 GPR182O15218 404 aa4.33□□□□□ -1.72
PTPN12-212ENST00000494248 MATN3O15232 486 aa4.33□□□□□ -1.72
PTPN12-212ENST00000494248 SIRT2Q8IXJ6 389 aa4.33□□□□□ -1.72
PTPN12-212ENST00000494248 SP8Q8IXZ3 490 aa4.33□□□□□ -1.72
PTPN12-212ENST00000494248 WNT10AQ9GZT5 417 aa4.33□□□□□ -1.72
PTPN12-212ENST00000494248 GPR160Q9UJ42 338 aa4.33□□□□□ -1.72
PTPN12-212ENST00000494248 AKAP2Q9Y2D5 859 aa4.33□□□□□ -1.72
PTPN12-212ENST00000494248 N4BP3O15049 544 aa4.32□□□□□ -1.72
PTPN12-212ENST00000494248 CILPO75339 1184 aa4.32□□□□□ -1.72
PTPN12-212ENST00000494248 CST3P01034 146 aaPredicted RBP4.32□□□□□ -1.72
PTPN12-212ENST00000494248 PDZRN4Q6ZMN7 1036 aaPredicted RBP4.32□□□□□ -1.72
PTPN12-212ENST00000494248 FAM129CQ86XR2 697 aa4.32□□□□□ -1.72
PTPN12-212ENST00000494248 C3orf58Q8NDZ4 430 aa4.32□□□□□ -1.72
PTPN12-212ENST00000494248 PIWIL2Q8TC59 973 aaKnown RBP4.32□□□□□ -1.72
PTPN12-212ENST00000494248 PLPPR2Q96GM1 343 aa4.32□□□□□ -1.72
PTPN12-212ENST00000494248 BCO2Q9BYV7 579 aa4.32□□□□□ -1.72
PTPN12-212ENST00000494248 NIF3L1Q9GZT8 377 aa4.32□□□□□ -1.72
PTPN12-212ENST00000494248 DUSP13Q9UII6 198 aa4.32□□□□□ -1.72
PTPN12-212ENST00000494248 BRPF3Q9ULD4 1205 aa4.32□□□□□ -1.72
PTPN12-212ENST00000494248 PCDHA11Q9Y5I1 949 aa4.32□□□□□ -1.72
PTPN12-212ENST00000494248 OR14I1A6ND48 311 aa4.31□□□□□ -1.72
PTPN12-212ENST00000494248 FSHBP01225 129 aa4.31□□□□□ -1.72
PTPN12-212ENST00000494248 SDHBP21912 280 aa4.31□□□□□ -1.72
PTPN12-212ENST00000494248 VIPR1P32241 457 aa4.31□□□□□ -1.72
PTPN12-212ENST00000494248 CDR1P51861 262 aa4.31□□□□□ -1.72
PTPN12-212ENST00000494248 ARHGAP4P98171 946 aa4.31□□□□□ -1.72
PTPN12-212ENST00000494248 SNX17Q15036 470 aa4.31□□□□□ -1.72
PTPN12-212ENST00000494248 LINC01356Q8N9X3 169 aa4.31□□□□□ -1.72
PTPN12-212ENST00000494248 ELMO3Q96BJ8 720 aa4.31□□□□□ -1.72
PTPN12-212ENST00000494248 VWCEQ96DN2 955 aa4.31□□□□□ -1.72
PTPN12-212ENST00000494248 SCAND2PQ9GZW5 306 aaPredicted RBP4.31□□□□□ -1.72
PTPN12-212ENST00000494248 GRIN3BO60391 1043 aa4.3□□□□□ -1.72
PTPN12-212ENST00000494248 ICMTO60725 284 aa4.3□□□□□ -1.72
PTPN12-212ENST00000494248 XRCC5P13010 732 aaKnown RBP4.3□□□□□ -1.72
PTPN12-212ENST00000494248 KRTAP10-7P60409 375 aaPredicted RBP4.3□□□□□ -1.72
PTPN12-212ENST00000494248 ADGRF1Q5T601 910 aa4.3□□□□□ -1.72
PTPN12-212ENST00000494248 ZNF746Q6NUN9 644 aaPredicted RBP4.3□□□□□ -1.72
PTPN12-212ENST00000494248 CNKSR3Q6P9H4 555 aa4.3□□□□□ -1.72
PTPN12-212ENST00000494248 NXPE4Q6UWF7 544 aa4.3□□□□□ -1.72
PTPN12-212ENST00000494248 TPTE2Q6XPS3 522 aa4.3□□□□□ -1.72
PTPN12-212ENST00000494248 NLRX1Q86UT6 975 aa4.3□□□□□ -1.72
PTPN12-212ENST00000494248 TSPYL5Q86VY4 417 aaPredicted RBP4.3□□□□□ -1.72
PTPN12-212ENST00000494248 LINC01599Q8WXQ3 324 aa4.3□□□□□ -1.72
PTPN12-212ENST00000494248 DPH2Q9BQC3 489 aaPredicted RBP4.3□□□□□ -1.72
PTPN12-212ENST00000494248 G6PC3Q9BUM1 346 aa4.3□□□□□ -1.72
PTPN12-212ENST00000494248 SIRT5Q9NXA8 310 aa4.3□□□□□ -1.72
PTPN12-212ENST00000494248 MTMR7Q9Y216 660 aa4.3□□□□□ -1.72
PTPN12-212ENST00000494248 CARNS1A5YM72 827 aa4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms