RNA–Protein interactions for RNA: ENST00000494047.5

RFC4-214, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 1,393 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-214ENST00000494047 SPECC1LQ69YQ0 1117 aa13.11□□□□□ -0.31
RFC4-214ENST00000494047 SHC4Q6S5L8 630 aa13.11□□□□□ -0.31
RFC4-214ENST00000494047 CYB5R4Q7L1T6 521 aa13.11□□□□□ -0.31
RFC4-214ENST00000494047 IQCA1Q86XH1 822 aa13.11□□□□□ -0.31
RFC4-214ENST00000494047 CERS3Q8IU89 383 aa13.11□□□□□ -0.31
RFC4-214ENST00000494047 DIS3L2Q8IYB7 885 aaKnown RBP13.11□□□□□ -0.31
RFC4-214ENST00000494047 AATFQ9NY61 560 aaKnown RBP eCLIP13.11□□□□□ -0.31
RFC4-214ENST00000494047 PIM2Q9P1W9 311 aa13.11□□□□□ -0.31
RFC4-214ENST00000494047 KIAA1551Q9HCM1 1747 aa13.11□□□□□ -0.31
RFC4-214ENST00000494047 EFCAB8A8MWE9 144 aa13.1□□□□□ -0.31
RFC4-214ENST00000494047 WDHD1O75717 1129 aaPredicted RBP13.1□□□□□ -0.31
RFC4-214ENST00000494047 MBD4O95243 580 aa13.1□□□□□ -0.31
RFC4-214ENST00000494047 PHKA1P46020 1223 aa13.1□□□□□ -0.31
RFC4-214ENST00000494047 PLCD1P51178 756 aa13.1□□□□□ -0.31
RFC4-214ENST00000494047 TBC1D9BQ66K14 1250 aa13.1□□□□□ -0.31
RFC4-214ENST00000494047 E4F1Q66K89 784 aaPredicted RBP13.1□□□□□ -0.31
RFC4-214ENST00000494047 MAGEB6Q8N7X4 407 aa13.1□□□□□ -0.31
RFC4-214ENST00000494047 MNS1Q8NEH6 495 aa13.1□□□□□ -0.31
RFC4-214ENST00000494047 GSDMAQ96QA5 445 aa13.1□□□□□ -0.31
RFC4-214ENST00000494047 BRIP1Q9BX63 1249 aa13.1□□□□□ -0.31
RFC4-214ENST00000494047 BRCA1P38398 1863 aaKnown RBP13.1□□□□□ -0.31
RFC4-214ENST00000494047 LAMB1P07942 1786 aa13.09□□□□□ -0.31
RFC4-214ENST00000494047 A0A0G2JLW4 131 aa13.09□□□□□ -0.31
RFC4-214ENST00000494047 TRIM75PA6NK02 468 aa13.09□□□□□ -0.31
RFC4-214ENST00000494047 MYL1P05976 194 aa13.09□□□□□ -0.31
RFC4-214ENST00000494047 DPEP1P16444 411 aa13.09□□□□□ -0.31
RFC4-214ENST00000494047 LMOD1P29536 600 aaPredicted RBP13.09□□□□□ -0.31
RFC4-214ENST00000494047 MARCKSP29966 332 aaPredicted RBP13.09□□□□□ -0.31
RFC4-214ENST00000494047 CDC27P30260 824 aa13.09□□□□□ -0.31
RFC4-214ENST00000494047 KRT2P35908 639 aa13.09□□□□□ -0.31
RFC4-214ENST00000494047 PDE6BP35913 854 aa13.09□□□□□ -0.31
RFC4-214ENST00000494047 UBE4AQ14139 1066 aa13.09□□□□□ -0.31
RFC4-214ENST00000494047 ARMCX5Q6P1M9 558 aa13.09□□□□□ -0.31
RFC4-214ENST00000494047 BICDL1Q6ZP65 573 aa13.09□□□□□ -0.31
RFC4-214ENST00000494047 CATIPQ7Z7H3 387 aa13.09□□□□□ -0.31
RFC4-214ENST00000494047 CRACR2BQ8N4Y2 399 aaPredicted RBP13.09□□□□□ -0.31
RFC4-214ENST00000494047 SPATA20Q8TB22 786 aa13.09□□□□□ -0.31
RFC4-214ENST00000494047 UBXN4Q92575 508 aa13.09□□□□□ -0.31
RFC4-214ENST00000494047 PANX2Q96RD6 677 aa13.09□□□□□ -0.31
RFC4-214ENST00000494047 RMND1Q9NWS8 449 aa13.09□□□□□ -0.31
RFC4-214ENST00000494047 ZSWIM5Q9P217 1185 aa13.09□□□□□ -0.31
RFC4-214ENST00000494047 ZNF215Q9UL58 517 aaPredicted RBP13.09□□□□□ -0.31
RFC4-214ENST00000494047 DENND2AQ9ULE3 1009 aa13.09□□□□□ -0.31
RFC4-214ENST00000494047 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.09□□□□□ -0.311e-6■□□□□ 9.9
RFC4-214ENST00000494047 MYO5AQ9Y4I1 1855 aaKnown RBP13.09□□□□□ -0.31
RFC4-214ENST00000494047 ZNF804BA4D1E1 1349 aa13.09□□□□□ -0.31
RFC4-214ENST00000494047 CCDC66A2RUB6 948 aa13.08□□□□□ -0.31
RFC4-214ENST00000494047 GSG1L2A8MUP6 293 aa13.08□□□□□ -0.31
RFC4-214ENST00000494047 NPHP1O15259 732 aa13.08□□□□□ -0.31
RFC4-214ENST00000494047 PRPF3O43395 683 aaKnown RBP13.08□□□□□ -0.31
RFC4-214ENST00000494047 ZSCAN20P17040 1043 aaPredicted RBP13.08□□□□□ -0.31
RFC4-214ENST00000494047 CDK11BP21127 795 aaKnown RBP13.08□□□□□ -0.31
RFC4-214ENST00000494047 SARSP49591 514 aaKnown RBP13.08□□□□□ -0.31
RFC4-214ENST00000494047 ST5P78524 1137 aa13.08□□□□□ -0.31
RFC4-214ENST00000494047 PPARAQ07869 468 aa13.08□□□□□ -0.31
RFC4-214ENST00000494047 RASGRF1Q13972 1273 aa13.08□□□□□ -0.31
RFC4-214ENST00000494047 MORC3Q14149 939 aa13.08□□□□□ -0.31
RFC4-214ENST00000494047 CCDC93Q567U6 631 aa13.08□□□□□ -0.31
RFC4-214ENST00000494047 DALRD3Q5D0E6 543 aaKnown RBP13.08□□□□□ -0.31
RFC4-214ENST00000494047 OTUD7BQ6GQQ9 843 aa13.08□□□□□ -0.31
RFC4-214ENST00000494047 METTL16Q86W50 562 aaKnown RBP13.08□□□□□ -0.31
RFC4-214ENST00000494047 CNGA4Q8IV77 575 aa13.08□□□□□ -0.31
RFC4-214ENST00000494047 ZNF654Q8IZM8 581 aa13.08□□□□□ -0.31
RFC4-214ENST00000494047 FANCBQ8NB91 859 aa13.08□□□□□ -0.31
RFC4-214ENST00000494047 FBXO2Q9UK22 296 aaPredicted RBP13.08□□□□□ -0.31
RFC4-214ENST00000494047 WWC3Q9ULE0 1092 aa13.08□□□□□ -0.31
RFC4-214ENST00000494047 SLC4A4Q9Y6R1 1079 aa13.08□□□□□ -0.31
RFC4-214ENST00000494047 MYH2Q9UKX2 1941 aa13.08□□□□□ -0.32
RFC4-214ENST00000494047 A0A1B0GUL6 1792 aa13.08□□□□□ -0.32
RFC4-214ENST00000494047 ITIH6Q6UXX5 1313 aa13.08□□□□□ -0.32
RFC4-214ENST00000494047 ARFGEF1Q9Y6D6 1849 aa13.08□□□□□ -0.32
RFC4-214ENST00000494047 GOLGB1Q14789 3259 aaKnown RBP13.08□□□□□ -0.32
RFC4-214ENST00000494047 H0YIN7 160 aa13.07□□□□□ -0.32
RFC4-214ENST00000494047 RANBP6O60518 1105 aaKnown RBP13.07□□□□□ -0.32
RFC4-214ENST00000494047 ZNF18P17022 549 aa13.07□□□□□ -0.32
RFC4-214ENST00000494047 KCNA3P22001 575 aa13.07□□□□□ -0.32
RFC4-214ENST00000494047 GPTP24298 496 aa13.07□□□□□ -0.32
RFC4-214ENST00000494047 CALML3P27482 149 aa13.07□□□□□ -0.32
RFC4-214ENST00000494047 TXLNAP40222 546 aa13.07□□□□□ -0.32
RFC4-214ENST00000494047 PPP1R2P41236 205 aa13.07□□□□□ -0.32
RFC4-214ENST00000494047 CAVIN4Q5BKX8 364 aa13.07□□□□□ -0.32
RFC4-214ENST00000494047 TPTE2Q6XPS3 522 aa13.07□□□□□ -0.32
RFC4-214ENST00000494047 CNBD1Q8NA66 436 aa13.07□□□□□ -0.32
RFC4-214ENST00000494047 PHKBQ93100 1093 aa13.07□□□□□ -0.32
RFC4-214ENST00000494047 BAG1Q99933 345 aaPredicted RBP13.07□□□□□ -0.32
RFC4-214ENST00000494047 EPB41L4AQ9HCS5 686 aaPredicted RBP13.07□□□□□ -0.32
RFC4-214ENST00000494047 GPHNQ9NQX3 736 aaPredicted RBP13.07□□□□□ -0.32
RFC4-214ENST00000494047 FAM217BQ9NTX9 383 aaPredicted RBP13.07□□□□□ -0.32
RFC4-214ENST00000494047 LRP2BPQ9P2M1 347 aa13.07□□□□□ -0.32
RFC4-214ENST00000494047 MYO1AQ9UBC5 1043 aa13.07□□□□□ -0.32
RFC4-214ENST00000494047 BCS1LQ9Y276 419 aa13.07□□□□□ -0.32
RFC4-214ENST00000494047 PCDHA5Q9Y5H7 936 aa13.07□□□□□ -0.32
RFC4-214ENST00000494047 BIN1O00499 593 aa13.07□□□□□ -0.32
RFC4-214ENST00000494047 DTNBO60941 627 aa13.07□□□□□ -0.32
RFC4-214ENST00000494047 FGRP09769 529 aa13.07□□□□□ -0.32
RFC4-214ENST00000494047 CCDC175P0C221 793 aa13.07□□□□□ -0.32
RFC4-214ENST00000494047 SLFN14P0C7P3 912 aa13.07□□□□□ -0.32
RFC4-214ENST00000494047 H2AFXP16104 143 aaPredicted RBP13.07□□□□□ -0.32
RFC4-214ENST00000494047 KIF5BP33176 963 aa13.07□□□□□ -0.32
RFC4-214ENST00000494047 MDM2Q00987 491 aaPredicted RBP13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms