RNA–Protein interactions for RNA: ENST00000493955.1

SMC2-205, Transcript of structural maintenance of chromosomes 2, humanhuman

TSL 1 (best)

Gene SMC2, Length 1,408 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC2-205ENST00000493955 KIF2CQ99661 725 aa8.8□□□□□ -1
SMC2-205ENST00000493955 SPATA9Q9BWV2 254 aa8.8□□□□□ -1
SMC2-205ENST00000493955 IGHA1P01876 353 aa8.79□□□□□ -1
SMC2-205ENST00000493955 CAP2P40123 477 aa8.79□□□□□ -1
SMC2-205ENST00000493955 IGBP1P78318 339 aa8.79□□□□□ -1
SMC2-205ENST00000493955 TCEA2Q15560 299 aa8.79□□□□□ -1
SMC2-205ENST00000493955 TRIM11Q96F44 468 aa8.79□□□□□ -1
SMC2-205ENST00000493955 CCDC74BQ96LY2 380 aa8.79□□□□□ -1
SMC2-205ENST00000493955 DPH2Q9BQC3 489 aaPredicted RBP8.79□□□□□ -1
SMC2-205ENST00000493955 SUCOQ9UBS9 1254 aaKnown RBP8.79□□□□□ -1
SMC2-205ENST00000493955 NOP58Q9Y2X3 529 aaKnown RBP8.79□□□□□ -1
SMC2-205ENST00000493955 COL4A3BPQ9Y5P4 624 aa8.79□□□□□ -1
SMC2-205ENST00000493955 UBOX5O94941 541 aa8.78□□□□□ -1
SMC2-205ENST00000493955 ZNF143P52747 638 aaPredicted RBP8.78□□□□□ -1
SMC2-205ENST00000493955 GYS2P54840 703 aa8.78□□□□□ -1
SMC2-205ENST00000493955 SOX4Q06945 474 aaPredicted RBP8.78□□□□□ -1
SMC2-205ENST00000493955 LONRF2Q1L5Z9 754 aa8.78□□□□□ -1
SMC2-205ENST00000493955 TKFCQ3LXA3 575 aa8.78□□□□□ -1
SMC2-205ENST00000493955 TMEM67Q5HYA8 995 aa8.78□□□□□ -1
SMC2-205ENST00000493955 ZC3HAV1Q7Z2W4 902 aaKnown RBP8.78□□□□□ -1
SMC2-205ENST00000493955 TMEM192Q8IY95 271 aa8.78□□□□□ -1
SMC2-205ENST00000493955 NEDD1Q8NHV4 660 aa8.78□□□□□ -1
SMC2-205ENST00000493955 WHAMMQ8TF30 809 aa8.78□□□□□ -1
SMC2-205ENST00000493955 CYB5D2Q8WUJ1 264 aa8.78□□□□□ -1
SMC2-205ENST00000493955 MRPL18Q9H0U6 180 aaKnown RBP8.78□□□□□ -1
SMC2-205ENST00000493955 PIDD1Q9HB75 910 aa8.78□□□□□ -1
SMC2-205ENST00000493955 ENAMQ9NRM1 1142 aa8.78□□□□□ -1
SMC2-205ENST00000493955 SPDYE3A6NKU9 549 aa8.77□□□□□ -1.01
SMC2-205ENST00000493955 TIAF1O95411 115 aa8.77□□□□□ -1.01
SMC2-205ENST00000493955 NAT2P11245 290 aa8.77□□□□□ -1.01
SMC2-205ENST00000493955 GBP1P32455 592 aa8.77□□□□□ -1.01
SMC2-205ENST00000493955 SLBPQ14493 270 aaKnown RBP eCLIP8.77□□□□□ -1.01
SMC2-205ENST00000493955 PRAMEF13Q5VWM6 474 aa8.77□□□□□ -1.01
SMC2-205ENST00000493955 IGF2-ASQ6U949 168 aa8.77□□□□□ -1.01
SMC2-205ENST00000493955 DYMQ7RTS9 669 aa8.77□□□□□ -1.01
SMC2-205ENST00000493955 UBE3DQ7Z6J8 389 aa8.77□□□□□ -1.01
SMC2-205ENST00000493955 PPFIBP1Q86W92 1011 aa8.77□□□□□ -1.01
SMC2-205ENST00000493955 ISL2Q96A47 359 aa8.77□□□□□ -1.01
SMC2-205ENST00000493955 SGSM3Q96HU1 749 aa8.77□□□□□ -1.01
SMC2-205ENST00000493955 GSX1Q9H4S2 264 aaPredicted RBP8.77□□□□□ -1.01
SMC2-205ENST00000493955 AGRPO00253 132 aa8.76□□□□□ -1.01
SMC2-205ENST00000493955 ADCY3O60266 1144 aa8.76□□□□□ -1.01
SMC2-205ENST00000493955 CLEC3AO75596 197 aa8.76□□□□□ -1.01
SMC2-205ENST00000493955 ASMTLO95671 621 aa8.76□□□□□ -1.01
SMC2-205ENST00000493955 CST3P01034 146 aaPredicted RBP8.76□□□□□ -1.01
SMC2-205ENST00000493955 FAM153BP0C7A2 387 aa8.76□□□□□ -1.01
SMC2-205ENST00000493955 DRD2P14416 443 aa8.76□□□□□ -1.01
SMC2-205ENST00000493955 ANAPC15P60006 121 aa8.76□□□□□ -1.01
SMC2-205ENST00000493955 ZC3H12BQ5HYM0 836 aaKnown RBP8.76□□□□□ -1.01
SMC2-205ENST00000493955 FDX2Q6P4F2 183 aa8.76□□□□□ -1.01
SMC2-205ENST00000493955 C12orf50Q8NA57 414 aaPredicted RBP8.76□□□□□ -1.01
SMC2-205ENST00000493955 ZBTB38Q8NAP3 1195 aaPredicted RBP8.76□□□□□ -1.01
SMC2-205ENST00000493955 SMARCC1Q92922 1105 aaPredicted RBP8.76□□□□□ -1.01
SMC2-205ENST00000493955 SLC26A8Q96RN1 970 aa8.76□□□□□ -1.01
SMC2-205ENST00000493955 PLVAPQ9BX97 442 aa8.76□□□□□ -1.01
SMC2-205ENST00000493955 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP8.76□□□□□ -1.01
SMC2-205ENST00000493955 CWC22Q9HCG8 908 aaKnown RBP8.76□□□□□ -1.01
SMC2-205ENST00000493955 RNGTTO60942 597 aaKnown RBP8.75□□□□□ -1.01
SMC2-205ENST00000493955 ELNP15502 786 aa8.75□□□□□ -1.01
SMC2-205ENST00000493955 TDRD10Q5VZ19 366 aaKnown RBP8.75□□□□□ -1.01
SMC2-205ENST00000493955 BAHD1Q8TBE0 780 aaPredicted RBP8.75□□□□□ -1.01
SMC2-205ENST00000493955 PCDH12Q9NPG4 1184 aa8.75□□□□□ -1.01
SMC2-205ENST00000493955 FAM86C1Q9NVL1 165 aa8.75□□□□□ -1.01
SMC2-205ENST00000493955 ACTL7BQ9Y614 415 aa8.75□□□□□ -1.01
SMC2-205ENST00000493955 ANKRD34BA5PLL1 514 aa8.74□□□□□ -1.01
SMC2-205ENST00000493955 GNB5O14775 395 aa8.74□□□□□ -1.01
SMC2-205ENST00000493955 ARHGEF15O94989 841 aa8.74□□□□□ -1.01
SMC2-205ENST00000493955 ASPAP45381 313 aa8.74□□□□□ -1.01
SMC2-205ENST00000493955 TRIM28Q13263 835 aaKnown RBP8.74□□□□□ -1.01
SMC2-205ENST00000493955 SV2CQ496J9 727 aa8.74□□□□□ -1.01
SMC2-205ENST00000493955 XP32Q5T750 250 aa8.74□□□□□ -1.01
SMC2-205ENST00000493955 ANKRD34AQ69YU3 496 aa8.74□□□□□ -1.01
SMC2-205ENST00000493955 SMYD4Q8IYR2 804 aaPredicted RBP8.74□□□□□ -1.01
SMC2-205ENST00000493955 HAUS7Q99871 368 aa8.74□□□□□ -1.01
SMC2-205ENST00000493955 FOXQ1Q9C009 403 aa8.74□□□□□ -1.01
SMC2-205ENST00000493955 SSU72Q9NP77 194 aaKnown RBP8.74□□□□□ -1.01
SMC2-205ENST00000493955 FAM105AQ9NUU6 356 aa8.74□□□□□ -1.01
SMC2-205ENST00000493955 PLAAQ9Y263 795 aa8.74□□□□□ -1.01
SMC2-205ENST00000493955 C9IYK1 514 aa8.73□□□□□ -1.01
SMC2-205ENST00000493955 PIK3R2O00459 728 aa8.73□□□□□ -1.01
SMC2-205ENST00000493955 TP53P04637 393 aaPredicted RBP8.73□□□□□ -1.01
SMC2-205ENST00000493955 LINC00114Q6XXX2 140 aa8.73□□□□□ -1.01
SMC2-205ENST00000493955 C2CD4AQ8NCU7 369 aaPredicted RBP8.73□□□□□ -1.01
SMC2-205ENST00000493955 CD2APQ9Y5K6 639 aa8.73□□□□□ -1.01
SMC2-205ENST00000493955 FAM229AH3BQW9 127 aa8.72□□□□□ -1.01
SMC2-205ENST00000493955 EPHX1P07099 455 aa8.72□□□□□ -1.01
SMC2-205ENST00000493955 SNRPNP63162 240 aaKnown RBP8.72□□□□□ -1.01
SMC2-205ENST00000493955 HEATR6Q6AI08 1181 aaKnown RBP8.72□□□□□ -1.01
SMC2-205ENST00000493955 PHF6Q8IWS0 365 aaKnown RBP eCLIP8.72□□□□□ -1.01
SMC2-205ENST00000493955 SUSD2Q9UGT4 822 aa8.72□□□□□ -1.01
SMC2-205ENST00000493955 CCDC163A0A0D9SF12 145 aa8.71□□□□□ -1.01
SMC2-205ENST00000493955 LRIG2O94898 1065 aa8.71□□□□□ -1.01
SMC2-205ENST00000493955 DALRD3Q5D0E6 543 aaKnown RBP8.71□□□□□ -1.01
SMC2-205ENST00000493955 AXDND1Q5T1B0 1012 aaPredicted RBP8.71□□□□□ -1.01
SMC2-205ENST00000493955 ARMCX6Q7L4S7 300 aa8.71□□□□□ -1.01
SMC2-205ENST00000493955 CCDC144CPQ8IYA2 1237 aa8.71□□□□□ -1.01
SMC2-205ENST00000493955 TMEM130Q8N3G9 435 aa8.71□□□□□ -1.01
SMC2-205ENST00000493955 MFSD2AQ8NA29 543 aa8.71□□□□□ -1.01
SMC2-205ENST00000493955 XAGE3Q8WTP9 111 aa8.71□□□□□ -1.01
SMC2-205ENST00000493955 APBA2Q99767 749 aa8.71□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 129.7 ms