RNA–Protein interactions for RNA: ENST00000493923.1

HDAC6-234, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 404 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-234ENST00000493923 UTP14CQ5TAP6 766 aaKnown RBP9.82□□□□□ -0.84
HDAC6-234ENST00000493923 UBE2Q1Q7Z7E8 422 aa9.82□□□□□ -0.84
HDAC6-234ENST00000493923 NBPF11Q86T75 865 aa9.82□□□□□ -0.84
HDAC6-234ENST00000493923 ZNF579Q8NAF0 562 aaKnown RBP9.82□□□□□ -0.84
HDAC6-234ENST00000493923 PROCA1Q8NCQ7 364 aaPredicted RBP9.82□□□□□ -0.84
HDAC6-234ENST00000493923 ACER1Q8TDN7 264 aa9.82□□□□□ -0.84
HDAC6-234ENST00000493923 DNAJC2Q99543 621 aaKnown RBP9.82□□□□□ -0.84
HDAC6-234ENST00000493923 NOL10Q9BSC4 688 aaKnown RBP9.82□□□□□ -0.84
HDAC6-234ENST00000493923 DHX36Q9H2U1 1008 aaKnown RBP9.82□□□□□ -0.84
HDAC6-234ENST00000493923 EMILIN3Q9NT22 766 aa9.82□□□□□ -0.84
HDAC6-234ENST00000493923 PRDM4Q9UKN5 801 aa9.82□□□□□ -0.84
HDAC6-234ENST00000493923 A0A0U1RQG5 324 aaPredicted RBP9.81□□□□□ -0.84
HDAC6-234ENST00000493923 FSD2A1L4K1 749 aa9.81□□□□□ -0.84
HDAC6-234ENST00000493923 PRKAB2O43741 272 aa9.81□□□□□ -0.84
HDAC6-234ENST00000493923 PTMSP20962 102 aa9.81□□□□□ -0.84
HDAC6-234ENST00000493923 SHMT1P34896 483 aa9.81□□□□□ -0.84
HDAC6-234ENST00000493923 FAM110CQ1W6H9 321 aa9.81□□□□□ -0.84
HDAC6-234ENST00000493923 Q3C1V9 767 aa9.81□□□□□ -0.84
HDAC6-234ENST00000493923 ERC1Q8IUD2 1116 aa9.81□□□□□ -0.84
HDAC6-234ENST00000493923 FOXP4Q8IVH2 680 aaPredicted RBP9.81□□□□□ -0.84
HDAC6-234ENST00000493923 RPAP2Q8IXW5 612 aaPredicted RBP9.81□□□□□ -0.84
HDAC6-234ENST00000493923 LCORLQ8N3X6 602 aa9.81□□□□□ -0.84
HDAC6-234ENST00000493923 CRACR2BQ8N4Y2 399 aaPredicted RBP9.81□□□□□ -0.84
HDAC6-234ENST00000493923 SLC44A5Q8NCS7 719 aa9.81□□□□□ -0.84
HDAC6-234ENST00000493923 SMCR8Q8TEV9 937 aaPredicted RBP9.81□□□□□ -0.84
HDAC6-234ENST00000493923 BOLA2Q9H3K6 86 aa9.81□□□□□ -0.84
HDAC6-234ENST00000493923 PCDH10Q9P2E7 1040 aa9.81□□□□□ -0.84
HDAC6-234ENST00000493923 GJD2Q9UKL4 321 aa9.81□□□□□ -0.84
HDAC6-234ENST00000493923 DDX19BQ9UMR2 479 aa9.81□□□□□ -0.84
HDAC6-234ENST00000493923 SZT2Q5T011 3432 aa9.81□□□□□ -0.84
HDAC6-234ENST00000493923 ZNF532Q9HCE3 1301 aa9.81□□□□□ -0.84
HDAC6-234ENST00000493923 MYH7P12883 1935 aa9.8□□□□□ -0.84
HDAC6-234ENST00000493923 CYP2D7A0A087X1C5 515 aa9.8□□□□□ -0.84
HDAC6-234ENST00000493923 TNPO2O14787 897 aaKnown RBP9.8□□□□□ -0.84
HDAC6-234ENST00000493923 CNMDO75829 334 aa9.8□□□□□ -0.84
HDAC6-234ENST00000493923 INHAP05111 366 aa9.8□□□□□ -0.84
HDAC6-234ENST00000493923 HOXD10P28358 340 aa9.8□□□□□ -0.84
HDAC6-234ENST00000493923 USP5P45974 858 aa9.8□□□□□ -0.84
HDAC6-234ENST00000493923 GABPAQ06546 454 aa9.8□□□□□ -0.84
HDAC6-234ENST00000493923 ZYXQ15942 572 aaKnown RBP9.8□□□□□ -0.84
HDAC6-234ENST00000493923 SLC9C2Q5TAH2 1124 aa9.8□□□□□ -0.84
HDAC6-234ENST00000493923 TATDN1Q6P1N9 297 aa9.8□□□□□ -0.84
HDAC6-234ENST00000493923 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.8□□□□□ -0.84
HDAC6-234ENST00000493923 CENPQQ7L2Z9 268 aaPredicted RBP9.8□□□□□ -0.84
HDAC6-234ENST00000493923 CLEC10AQ8IUN9 316 aa9.8□□□□□ -0.84
HDAC6-234ENST00000493923 SDR42E1Q8WUS8 393 aa9.8□□□□□ -0.84
HDAC6-234ENST00000493923 KIF1BPQ96EK5 621 aa9.8□□□□□ -0.84
HDAC6-234ENST00000493923 DYNLL2Q96FJ2 89 aa9.8□□□□□ -0.84
HDAC6-234ENST00000493923 RNF208Q9H0X6 261 aa9.8□□□□□ -0.84
HDAC6-234ENST00000493923 ARMT1Q9H993 441 aa9.8□□□□□ -0.84
HDAC6-234ENST00000493923 RBPJLQ9UBG7 517 aa9.8□□□□□ -0.84
HDAC6-234ENST00000493923 BIN2Q9UBW5 565 aaPredicted RBP9.8□□□□□ -0.84
HDAC6-234ENST00000493923 TAOK2Q9UL54 1235 aa9.8□□□□□ -0.84
HDAC6-234ENST00000493923 RLFQ13129 1914 aa9.8□□□□□ -0.84
HDAC6-234ENST00000493923 MAGEB6P1A0A0J9YX57 407 aa9.79□□□□□ -0.84
HDAC6-234ENST00000493923 ESPNB1AK53 854 aa9.79□□□□□ -0.84
HDAC6-234ENST00000493923 USP17L10C9JJH3 530 aa9.79□□□□□ -0.84
HDAC6-234ENST00000493923 H0YGN5 161 aa9.79□□□□□ -0.84
HDAC6-234ENST00000493923 GJB1P08034 283 aa9.79□□□□□ -0.84
HDAC6-234ENST00000493923 ASNSP08243 561 aa9.79□□□□□ -0.84
HDAC6-234ENST00000493923 HOXA7P31268 230 aaPredicted RBP9.79□□□□□ -0.84
HDAC6-234ENST00000493923 GJA8P48165 433 aa9.79□□□□□ -0.84
HDAC6-234ENST00000493923 HERVK_113P62684 666 aa9.79□□□□□ -0.84
HDAC6-234ENST00000493923 MAP3K12Q12852 859 aa9.79□□□□□ -0.84
HDAC6-234ENST00000493923 KIAA1755Q5JYT7 1200 aa9.79□□□□□ -0.84
HDAC6-234ENST00000493923 TSHZ3Q63HK5 1081 aa9.79□□□□□ -0.84
HDAC6-234ENST00000493923 SLAIN1Q8ND83 568 aa9.79□□□□□ -0.84
HDAC6-234ENST00000493923 U2AF1L4Q8WU68 220 aaKnown RBP9.79□□□□□ -0.84
HDAC6-234ENST00000493923 TRIM44Q96DX7 344 aaPredicted RBP9.79□□□□□ -0.84
HDAC6-234ENST00000493923 PORCNQ9H237 461 aa9.79□□□□□ -0.84
HDAC6-234ENST00000493923 AS3MTQ9HBK9 375 aa9.79□□□□□ -0.84
HDAC6-234ENST00000493923 MORF4L1Q9UBU8 362 aa9.79□□□□□ -0.84
HDAC6-234ENST00000493923 A0A1W2PRG0 241 aa9.78□□□□□ -0.84
HDAC6-234ENST00000493923 HLA-DOAP06340 250 aa9.78□□□□□ -0.84
HDAC6-234ENST00000493923 IFIT2P09913 472 aaKnown RBP9.78□□□□□ -0.84
HDAC6-234ENST00000493923 IRF5Q13568 498 aa9.78□□□□□ -0.84
HDAC6-234ENST00000493923 SEPT2Q15019 361 aa9.78□□□□□ -0.84
HDAC6-234ENST00000493923 HSP90AB4PQ58FF6 505 aa9.78□□□□□ -0.84
HDAC6-234ENST00000493923 HABP4Q5JVS0 413 aaKnown RBP9.78□□□□□ -0.84
HDAC6-234ENST00000493923 TAF3Q5VWG9 929 aa9.78□□□□□ -0.84
HDAC6-234ENST00000493923 CLASRPQ8N2M8 674 aaKnown RBP9.78□□□□□ -0.84
HDAC6-234ENST00000493923 DIS3LQ8TF46 1054 aaKnown RBP9.78□□□□□ -0.84
HDAC6-234ENST00000493923 PPIL4Q8WUA2 492 aaKnown RBP eCLIP9.78□□□□□ -0.84
HDAC6-234ENST00000493923 TBC1D2Q9BYX2 928 aa9.78□□□□□ -0.84
HDAC6-234ENST00000493923 EHD4Q9H223 541 aa9.78□□□□□ -0.84
HDAC6-234ENST00000493923 DCP1AQ9NPI6 582 aaPredicted RBP9.78□□□□□ -0.84
HDAC6-234ENST00000493923 PAG1Q9NWQ8 432 aa9.78□□□□□ -0.84
HDAC6-234ENST00000493923 SERPINB13Q9UIV8 391 aa9.78□□□□□ -0.84
HDAC6-234ENST00000493923 PNMA3Q9UL41 463 aa9.78□□□□□ -0.84
HDAC6-234ENST00000493923 COLQQ9Y215 455 aaPredicted RBP9.78□□□□□ -0.84
HDAC6-234ENST00000493923 RAB11FIP3O75154 756 aa9.77□□□□□ -0.85
HDAC6-234ENST00000493923 MBD4O95243 580 aa9.77□□□□□ -0.85
HDAC6-234ENST00000493923 ATP5JP18859 108 aa9.77□□□□□ -0.85
HDAC6-234ENST00000493923 ADD2P35612 726 aa9.77□□□□□ -0.85
HDAC6-234ENST00000493923 GCLCP48506 637 aaPredicted RBP9.77□□□□□ -0.85
HDAC6-234ENST00000493923 MNX1P50219 401 aaPredicted RBP9.77□□□□□ -0.85
HDAC6-234ENST00000493923 UBXN2AP68543 259 aa9.77□□□□□ -0.85
HDAC6-234ENST00000493923 IRX3P78415 501 aaPredicted RBP9.77□□□□□ -0.85
HDAC6-234ENST00000493923 RAB3GAP1Q15042 981 aa9.77□□□□□ -0.85
HDAC6-234ENST00000493923 CCL14Q16627 93 aa9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms