RNA–Protein interactions for RNA: ENST00000493916.1

SNIP1-203, Transcript of Smad nuclear interacting protein 1, humanhuman

TSL 4

Gene SNIP1, Length 546 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-203ENST00000493916 SEPT2Q15019 361 aa27.1■■□□□ 1.93
SNIP1-203ENST00000493916 CCDC17Q96LX7 622 aa27.1■■□□□ 1.93
SNIP1-203ENST00000493916 FEZ1Q99689 392 aa27.1■■□□□ 1.93
SNIP1-203ENST00000493916 PATL2C9JE40 543 aaKnown RBP27.09■■□□□ 1.93
SNIP1-203ENST00000493916 MPHOSPH10O00566 681 aaKnown RBP27.09■■□□□ 1.93
SNIP1-203ENST00000493916 CTGFP29279 349 aa27.09■■□□□ 1.93
SNIP1-203ENST00000493916 PSMC4P43686 418 aa27.09■■□□□ 1.93
SNIP1-203ENST00000493916 GCLCP48506 637 aaPredicted RBP27.09■■□□□ 1.93
SNIP1-203ENST00000493916 USP14P54578 494 aa27.09■■□□□ 1.93
SNIP1-203ENST00000493916 TRIM47Q96LD4 638 aa27.09■■□□□ 1.93
SNIP1-203ENST00000493916 PRMT2P55345 433 aa27.08■■□□□ 1.93
SNIP1-203ENST00000493916 ACER1Q8TDN7 264 aa27.08■■□□□ 1.93
SNIP1-203ENST00000493916 AKR1B1P15121 316 aa27.07■■□□□ 1.92
SNIP1-203ENST00000493916 TDO2P48775 406 aa27.07■■□□□ 1.92
SNIP1-203ENST00000493916 IRX3P78415 501 aaPredicted RBP27.07■■□□□ 1.92
SNIP1-203ENST00000493916 FAM110CQ1W6H9 321 aa27.07■■□□□ 1.92
SNIP1-203ENST00000493916 NACAP1Q9BZK3 213 aa27.07■■□□□ 1.92
SNIP1-203ENST00000493916 APPP05067 770 aa27.06■■□□□ 1.92
SNIP1-203ENST00000493916 FCGRTP55899 365 aa27.06■■□□□ 1.92
SNIP1-203ENST00000493916 IFNL3Q8IZI9 196 aa27.06■■□□□ 1.92
SNIP1-203ENST00000493916 ANKRD13CQ8N6S4 541 aa27.06■■□□□ 1.92
SNIP1-203ENST00000493916 HELLSQ9NRZ9 838 aa27.06■■□□□ 1.92
SNIP1-203ENST00000493916 FMNL1O95466 1100 aaPredicted RBP27.05■■□□□ 1.92
SNIP1-203ENST00000493916 ZYXQ15942 572 aaKnown RBP27.05■■□□□ 1.92
SNIP1-203ENST00000493916 ARMC5Q96C12 935 aa27.05■■□□□ 1.92
SNIP1-203ENST00000493916 PTCH2Q9Y6C5 1203 aa27.05■■□□□ 1.92
SNIP1-203ENST00000493916 MINDY4BA8MYZ0 360 aa27.04■■□□□ 1.92
SNIP1-203ENST00000493916 TRIM6-TRIM34B2RNG4 842 aa27.04■■□□□ 1.92
SNIP1-203ENST00000493916 HOXD10P28358 340 aa27.04■■□□□ 1.92
SNIP1-203ENST00000493916 SRRDQ9UH36 339 aa27.04■■□□□ 1.92
SNIP1-203ENST00000493916 MGAMO43451 1857 aa27.04■■□□□ 1.92
SNIP1-203ENST00000493916 A0A1W2PRG0 241 aa27.03■■□□□ 1.92
SNIP1-203ENST00000493916 VCAM1P19320 739 aa27.03■■□□□ 1.92
SNIP1-203ENST00000493916 RGS19P49795 217 aa27.03■■□□□ 1.92
SNIP1-203ENST00000493916 HERVK_113P62684 666 aa27.03■■□□□ 1.92
SNIP1-203ENST00000493916 ICA1Q05084 483 aa27.03■■□□□ 1.92
SNIP1-203ENST00000493916 CCDC129Q6ZRS4 1044 aa27.03■■□□□ 1.92
SNIP1-203ENST00000493916 GTF3C2Q8WUA4 911 aaPredicted RBP27.03■■□□□ 1.92
SNIP1-203ENST00000493916 P2RX7Q99572 595 aaKnown RBP27.03■■□□□ 1.92
SNIP1-203ENST00000493916 MORF4L1Q9UBU8 362 aa27.03■■□□□ 1.92
SNIP1-203ENST00000493916 USP17L15C9J2P7 530 aa27.02■■□□□ 1.92
SNIP1-203ENST00000493916 USP17L13C9JLJ4 530 aa27.02■■□□□ 1.92
SNIP1-203ENST00000493916 USP17L11C9JVI0 530 aa27.02■■□□□ 1.92
SNIP1-203ENST00000493916 USP17L18D6R9N7 530 aa27.02■■□□□ 1.92
SNIP1-203ENST00000493916 USP17L22D6RA61 530 aa27.02■■□□□ 1.92
SNIP1-203ENST00000493916 USP17L17D6RBQ6 530 aa27.02■■□□□ 1.92
SNIP1-203ENST00000493916 USP17L19D6RCP7 530 aa27.02■■□□□ 1.92
SNIP1-203ENST00000493916 USP17L20D6RJB6 530 aa27.02■■□□□ 1.92
SNIP1-203ENST00000493916 FOXP2O15409 715 aa27.02■■□□□ 1.92
SNIP1-203ENST00000493916 USP17L24Q0WX57 530 aa27.02■■□□□ 1.92
SNIP1-203ENST00000493916 RILPL2Q969X0 211 aa27.02■■□□□ 1.92
SNIP1-203ENST00000493916 NAPBQ9H115 298 aa27.02■■□□□ 1.92
SNIP1-203ENST00000493916 ARHGEF10LQ9HCE6 1279 aa27.02■■□□□ 1.92
SNIP1-203ENST00000493916 CENPFP49454 3210 aa27.02■■□□□ 1.92
SNIP1-203ENST00000493916 GREB1LQ9C091 1923 aaPredicted RBP27.02■■□□□ 1.92
SNIP1-203ENST00000493916 MYPNQ86TC9 1320 aa27.01■■□□□ 1.91
SNIP1-203ENST00000493916 A0A0D9SFI3 127 aa27.01■■□□□ 1.91
SNIP1-203ENST00000493916 ECM2O94769 699 aaPredicted RBP27.01■■□□□ 1.91
SNIP1-203ENST00000493916 RASA1P20936 1047 aa27.01■■□□□ 1.91
SNIP1-203ENST00000493916 SIAH1Q8IUQ4 282 aa27.01■■□□□ 1.91
SNIP1-203ENST00000493916 FAM227BQ96M60 508 aa27.01■■□□□ 1.91
SNIP1-203ENST00000493916 SH2D4AQ9H788 454 aa27.01■■□□□ 1.91
SNIP1-203ENST00000493916 ZNF287Q9HBT7 754 aa27.01■■□□□ 1.91
SNIP1-203ENST00000493916 SOX10P56693 466 aa27■■□□□ 1.91
SNIP1-203ENST00000493916 SLC9C1Q4G0N8 1177 aa27■■□□□ 1.91
SNIP1-203ENST00000493916 MCMDC2Q4G0Z9 681 aa27■■□□□ 1.91
SNIP1-203ENST00000493916 CATSPERGQ6ZRH7 1159 aa27■■□□□ 1.91
SNIP1-203ENST00000493916 KANSL2Q9H9L4 492 aa27■■□□□ 1.91
SNIP1-203ENST00000493916 MKNK2Q9HBH9 465 aa27■■□□□ 1.91
SNIP1-203ENST00000493916 TMX2Q9Y320 296 aa27■■□□□ 1.91
SNIP1-203ENST00000493916 CLEC10AQ8IUN9 316 aa26.99■■□□□ 1.91
SNIP1-203ENST00000493916 GNL3Q9BVP2 549 aaKnown RBP eCLIP26.99■■□□□ 1.91
SNIP1-203ENST00000493916 TNPO2O14787 897 aaKnown RBP26.98■■□□□ 1.91
SNIP1-203ENST00000493916 PDE4AP27815 886 aa26.98■■□□□ 1.91
SNIP1-203ENST00000493916 PRKCZQ05513 592 aa26.98■■□□□ 1.91
SNIP1-203ENST00000493916 NMIQ13287 307 aaPredicted RBP26.98■■□□□ 1.91
SNIP1-203ENST00000493916 LPAR1Q92633 364 aa26.98■■□□□ 1.91
SNIP1-203ENST00000493916 RPAP3Q9H6T3 665 aaPredicted RBP26.98■■□□□ 1.91
SNIP1-203ENST00000493916 SLC3A2P08195 630 aaKnown RBP26.97■■□□□ 1.91
SNIP1-203ENST00000493916 SDSP20132 328 aa26.97■■□□□ 1.91
SNIP1-203ENST00000493916 PPARAQ07869 468 aa26.97■■□□□ 1.91
SNIP1-203ENST00000493916 VPS53Q5VIR6 699 aa26.97■■□□□ 1.91
SNIP1-203ENST00000493916 NBPF11Q86T75 865 aa26.97■■□□□ 1.91
SNIP1-203ENST00000493916 STK11IPQ8N1F8 1099 aa26.97■■□□□ 1.91
SNIP1-203ENST00000493916 ZNF333Q96JL9 665 aa26.97■■□□□ 1.91
SNIP1-203ENST00000493916 TXNRD2Q9NNW7 524 aa26.97■■□□□ 1.91
SNIP1-203ENST00000493916 RBPJLQ9UBG7 517 aa26.97■■□□□ 1.91
SNIP1-203ENST00000493916 EEF2P13639 858 aaKnown RBP26.96■■□□□ 1.91
SNIP1-203ENST00000493916 ALX1Q15699 326 aa26.96■■□□□ 1.91
SNIP1-203ENST00000493916 LBX2Q6XYB7 198 aa26.96■■□□□ 1.91
SNIP1-203ENST00000493916 GPRC5AQ8NFJ5 357 aa26.96■■□□□ 1.91
SNIP1-203ENST00000493916 RAET1EQ8TD07 263 aa26.96■■□□□ 1.91
SNIP1-203ENST00000493916 VCPKMTQ9H867 229 aa26.96■■□□□ 1.91
SNIP1-203ENST00000493916 PDE4BQ07343 736 aa26.95■■□□□ 1.9
SNIP1-203ENST00000493916 KIAA1755Q5JYT7 1200 aa26.95■■□□□ 1.9
SNIP1-203ENST00000493916 POTEEQ6S8J3 1075 aa26.95■■□□□ 1.9
SNIP1-203ENST00000493916 ZNF589Q86UQ0 364 aaPredicted RBP26.95■■□□□ 1.9
SNIP1-203ENST00000493916 COA7Q96BR5 231 aa26.95■■□□□ 1.9
SNIP1-203ENST00000493916 GABRQQ9UN88 632 aa26.95■■□□□ 1.9
SNIP1-203ENST00000493916 PLIN4Q96Q06 1357 aa26.95■■□□□ 1.9
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms